BLASTX nr result

ID: Panax21_contig00005976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005976
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171033.1| PREDICTED: RNA-binding protein 8A-like [Cucu...    60   2e-07
ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucu...    60   2e-07
ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...    60   2e-07
gb|ABA46782.1| unknown [Solanum tuberosum]                             59   4e-07
gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN398...    57   2e-06

>ref|XP_004171033.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 109

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 3   YENFEEAEKAIAEMDGGELLTQTITVDWAFSKGPFK 110
           YE+FEEAEKAI+ MDG ELLTQ I VDWAFS GP +
Sbjct: 55  YESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIR 90


>ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 197

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 3   YENFEEAEKAIAEMDGGELLTQTITVDWAFSKGPFK 110
           YE+FEEAEKAI+ MDG ELLTQ I VDWAFS GP +
Sbjct: 143 YESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIR 178


>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   YENFEEAEKAIAEMDGGELLTQTITVDWAFSKGPFK 110
           YEN EEA+ AI+ M+G ELLTQTI+VDWAFS GPFK
Sbjct: 146 YENLEEAQAAISAMNGTELLTQTISVDWAFSNGPFK 181


>gb|ABA46782.1| unknown [Solanum tuberosum]
          Length = 195

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   YENFEEAEKAIAEMDGGELLTQTITVDWAFSKGPFK 110
           YE+FEEA++AI+E DG E LTQTI V WAFS+GPFK
Sbjct: 139 YESFEEAQRAISEKDGAEFLTQTIHVAWAFSRGPFK 174


>gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN39899.1| unknown
           [Picea sitchensis]
          Length = 205

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 3   YENFEEAEKAIAEMDGGELLTQTITVDWAFSKGPFK 110
           YE F+EA+ AI  ++G ELLTQTI+VDWAFS GPF+
Sbjct: 147 YETFKEAQAAITNLNGAELLTQTISVDWAFSNGPFR 182


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