BLASTX nr result

ID: Panax21_contig00005965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005965
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25290.3| unnamed protein product [Vitis vinifera]              396   e-108
ref|XP_002274572.1| PREDICTED: uncharacterized protein LOC100260...   396   e-108
gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotian...   394   e-107
gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotian...   390   e-106
ref|XP_002316448.1| predicted protein [Populus trichocarpa] gi|2...   365   1e-98

>emb|CBI25290.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  396 bits (1018), Expect = e-108
 Identities = 205/320 (64%), Positives = 244/320 (76%), Gaps = 7/320 (2%)
 Frame = -1

Query: 1357 SSSTHFNLSKKSKSGRGVKLFQPPPPAAALK-----LRCAVSL--EPTIRKNNGGGNINC 1199
            S +TH   S        +  F PP      K     L+C+VS+  EP   +      +  
Sbjct: 7    SLTTHLWPSLPLSKPTTITHFSPPKATPFRKSLFQTLKCSVSVASEPAHLEL-----VRN 61

Query: 1198 KPLPAEVSRTIMELSSVGTLSVLTQEGFPLGFGVRFAVDPQGTPLLCFNSSTTNFVAAPL 1019
            KP PAEVSRTIMELSSV TLS LTQ+G+PLG GVRFAVDPQGTP++C N+S ++F    +
Sbjct: 62   KPFPAEVSRTIMELSSVATLSALTQDGWPLGVGVRFAVDPQGTPIVCLNASHSHF---SI 118

Query: 1018 PTKSTLHVQLEQCGLRTPQCTIQGTLDKPQDRMTLKKLQSIWRKRFEEEVDEDLIYIVSV 839
              +S+LHVQLEQCGLRTPQCTIQG+LDKP+DRM LKKL SIW +RF +EVDE+L+++VSV
Sbjct: 119  DRRSSLHVQLEQCGLRTPQCTIQGSLDKPEDRMALKKLHSIWERRFGKEVDENLLHVVSV 178

Query: 838  ERVLQIEDFMEDGVWFTSLDYKLAIPDPLRESAETIVHEINTHNMEDIHRFCNIYADLNF 659
            ERVLQ+EDF E G W TS DY+ A PDPLR+SAE  V EINT+NMED++RFCNIY DL+F
Sbjct: 179  ERVLQMEDFQEVGTWVTSSDYRTANPDPLRDSAEKFVDEINTNNMEDVNRFCNIYVDLDF 238

Query: 658  QVSEAKMVWVDRLGFDMRLCSPQNDVFEVRIPFPREVADEKGAKSSFNCMSQLAWEMEKN 479
            Q  EAK++WVDRLGFDMR+ SPQ DVFEVRIPFPREV DEKGAKSSFN MSQLAWE+EKN
Sbjct: 239  QALEAKLIWVDRLGFDMRISSPQKDVFEVRIPFPREVTDEKGAKSSFNSMSQLAWEVEKN 298

Query: 478  YHAHDFNKVKQLKKITCIGR 419
            Y+A DF KVKQLK+IT  G+
Sbjct: 299  YNAPDFKKVKQLKQITYRGQ 318


>ref|XP_002274572.1| PREDICTED: uncharacterized protein LOC100260424 [Vitis vinifera]
          Length = 324

 Score =  396 bits (1018), Expect = e-108
 Identities = 205/320 (64%), Positives = 244/320 (76%), Gaps = 7/320 (2%)
 Frame = -1

Query: 1357 SSSTHFNLSKKSKSGRGVKLFQPPPPAAALK-----LRCAVSL--EPTIRKNNGGGNINC 1199
            S +TH   S        +  F PP      K     L+C+VS+  EP   +      +  
Sbjct: 13   SLTTHLWPSLPLSKPTTITHFSPPKATPFRKSLFQTLKCSVSVASEPAHLEL-----VRN 67

Query: 1198 KPLPAEVSRTIMELSSVGTLSVLTQEGFPLGFGVRFAVDPQGTPLLCFNSSTTNFVAAPL 1019
            KP PAEVSRTIMELSSV TLS LTQ+G+PLG GVRFAVDPQGTP++C N+S ++F    +
Sbjct: 68   KPFPAEVSRTIMELSSVATLSALTQDGWPLGVGVRFAVDPQGTPIVCLNASHSHF---SI 124

Query: 1018 PTKSTLHVQLEQCGLRTPQCTIQGTLDKPQDRMTLKKLQSIWRKRFEEEVDEDLIYIVSV 839
              +S+LHVQLEQCGLRTPQCTIQG+LDKP+DRM LKKL SIW +RF +EVDE+L+++VSV
Sbjct: 125  DRRSSLHVQLEQCGLRTPQCTIQGSLDKPEDRMALKKLHSIWERRFGKEVDENLLHVVSV 184

Query: 838  ERVLQIEDFMEDGVWFTSLDYKLAIPDPLRESAETIVHEINTHNMEDIHRFCNIYADLNF 659
            ERVLQ+EDF E G W TS DY+ A PDPLR+SAE  V EINT+NMED++RFCNIY DL+F
Sbjct: 185  ERVLQMEDFQEVGTWVTSSDYRTANPDPLRDSAEKFVDEINTNNMEDVNRFCNIYVDLDF 244

Query: 658  QVSEAKMVWVDRLGFDMRLCSPQNDVFEVRIPFPREVADEKGAKSSFNCMSQLAWEMEKN 479
            Q  EAK++WVDRLGFDMR+ SPQ DVFEVRIPFPREV DEKGAKSSFN MSQLAWE+EKN
Sbjct: 245  QALEAKLIWVDRLGFDMRISSPQKDVFEVRIPFPREVTDEKGAKSSFNSMSQLAWEVEKN 304

Query: 478  YHAHDFNKVKQLKKITCIGR 419
            Y+A DF KVKQLK+IT  G+
Sbjct: 305  YNAPDFKKVKQLKQITYRGQ 324


>gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score =  394 bits (1013), Expect = e-107
 Identities = 199/294 (67%), Positives = 231/294 (78%), Gaps = 2/294 (0%)
 Frame = -1

Query: 1297 FQPPPPAAALKLRCAVSL--EPTIRKNNGGGNINCKPLPAEVSRTIMELSSVGTLSVLTQ 1124
            F   P  +   L+CAVS+  EP   +    G    KP PAEVSRTIMELSSVGTLS  TQ
Sbjct: 33   FSKSPRFSIGPLKCAVSVVSEPIQSEKTNNG----KPYPAEVSRTIMELSSVGTLSTPTQ 88

Query: 1123 EGFPLGFGVRFAVDPQGTPLLCFNSSTTNFVAAPLPTKSTLHVQLEQCGLRTPQCTIQGT 944
            +G+PLGFGVRFAVDP GTP+L  N +T+      +  KS++HVQLEQ GLRTPQCTIQGT
Sbjct: 89   DGWPLGFGVRFAVDPHGTPVLFLNDATSKL---SVNCKSSIHVQLEQYGLRTPQCTIQGT 145

Query: 943  LDKPQDRMTLKKLQSIWRKRFEEEVDEDLIYIVSVERVLQIEDFMEDGVWFTSLDYKLAI 764
            L+KP+D   LKKL S+W+KRF  EVDED ++++SVERVLQ+EDF EDG+W TS DYKLA 
Sbjct: 146  LEKPEDTTALKKLHSVWKKRFGHEVDEDHLFLLSVERVLQLEDFAEDGIWVTSSDYKLAN 205

Query: 763  PDPLRESAETIVHEINTHNMEDIHRFCNIYADLNFQVSEAKMVWVDRLGFDMRLCSPQND 584
            PDPLR+ AE ++ EINTHN EDI RFCNIY DL+FQVS+AKM+WVDRLGFD+R  SPQND
Sbjct: 206  PDPLRDFAERMIEEINTHNREDILRFCNIYVDLDFQVSDAKMLWVDRLGFDVRFRSPQND 265

Query: 583  VFEVRIPFPREVADEKGAKSSFNCMSQLAWEMEKNYHAHDFNKVKQLKKITCIG 422
            VFE RIPFPREVADEKGAKSSFNCMSQLAWE+EKN+HA +F K KQLKKI   G
Sbjct: 266  VFEARIPFPREVADEKGAKSSFNCMSQLAWEVEKNFHAAEFEKAKQLKKIEYTG 319


>gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score =  390 bits (1001), Expect = e-106
 Identities = 200/304 (65%), Positives = 233/304 (76%), Gaps = 3/304 (0%)
 Frame = -1

Query: 1324 SKSGRGVKLFQPPPPAAAL-KLRCAVSL--EPTIRKNNGGGNINCKPLPAEVSRTIMELS 1154
            SKS    +   P  P  ++  LRCAVS+  EP   +    G    KP PAEVSRTIMELS
Sbjct: 23   SKSWNRAQFTFPKCPRFSIGPLRCAVSVVSEPIQSEKTNNG----KPYPAEVSRTIMELS 78

Query: 1153 SVGTLSVLTQEGFPLGFGVRFAVDPQGTPLLCFNSSTTNFVAAPLPTKSTLHVQLEQCGL 974
            SVGTLS  T +G+PLGFGVRFAVDP GTP+L  N +T+      +  KS++HVQ EQ GL
Sbjct: 79   SVGTLSTPTLDGWPLGFGVRFAVDPHGTPVLFLNDATSKL---SVNCKSSIHVQFEQYGL 135

Query: 973  RTPQCTIQGTLDKPQDRMTLKKLQSIWRKRFEEEVDEDLIYIVSVERVLQIEDFMEDGVW 794
            RTPQCTIQGTL+KP+D   LKKL S+W+KRF  EVDED ++++SVERVLQ+EDF EDG+W
Sbjct: 136  RTPQCTIQGTLEKPEDTTALKKLHSVWKKRFGHEVDEDHLFLLSVERVLQLEDFAEDGIW 195

Query: 793  FTSLDYKLAIPDPLRESAETIVHEINTHNMEDIHRFCNIYADLNFQVSEAKMVWVDRLGF 614
             TS DYKLA PDPLR+ AE ++ EINTHN EDI RFCNIY DL+FQVS+AKM+WVDRLGF
Sbjct: 196  VTSSDYKLANPDPLRDFAERMIEEINTHNREDILRFCNIYVDLDFQVSDAKMLWVDRLGF 255

Query: 613  DMRLCSPQNDVFEVRIPFPREVADEKGAKSSFNCMSQLAWEMEKNYHAHDFNKVKQLKKI 434
            D+R  SPQNDVFE RIPFPREV DEKGAKSSFNCMSQLAWE+EKN+HA +F K KQLKKI
Sbjct: 256  DVRFRSPQNDVFEARIPFPREVTDEKGAKSSFNCMSQLAWEVEKNFHAAEFEKAKQLKKI 315

Query: 433  TCIG 422
               G
Sbjct: 316  EYTG 319


>ref|XP_002316448.1| predicted protein [Populus trichocarpa] gi|222865488|gb|EEF02619.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  365 bits (937), Expect = 1e-98
 Identities = 180/284 (63%), Positives = 218/284 (76%)
 Frame = -1

Query: 1282 PAAALKLRCAVSLEPTIRKNNGGGNINCKPLPAEVSRTIMELSSVGTLSVLTQEGFPLGF 1103
            P     L+C++S        +  G+ N KP PAE+SRTIMELSSVGTLS LT +G+PL  
Sbjct: 38   PFPQFSLKCSLSTVSAEPPTHVVGSSNDKPFPAEISRTIMELSSVGTLSTLTPDGWPLSV 97

Query: 1102 GVRFAVDPQGTPLLCFNSSTTNFVAAPLPTKSTLHVQLEQCGLRTPQCTIQGTLDKPQDR 923
            GVRFAVD  GTP+LC + S   F    +  +S+LHVQLEQ G+RTPQCTIQG+LDKP+D 
Sbjct: 98   GVRFAVDDDGTPILCLSDSHRQF---SVDRRSSLHVQLEQSGMRTPQCTIQGSLDKPEDT 154

Query: 922  MTLKKLQSIWRKRFEEEVDEDLIYIVSVERVLQIEDFMEDGVWFTSLDYKLAIPDPLRES 743
              LK+  S+W+KRF EEV ++LIY+V++ERVLQ+EDF+EDGVW +S DYK A PDPLR+ 
Sbjct: 155  KLLKRAHSMWKKRFGEEVKDELIYVVAMERVLQMEDFVEDGVWVSSSDYKNASPDPLRDF 214

Query: 742  AETIVHEINTHNMEDIHRFCNIYADLNFQVSEAKMVWVDRLGFDMRLCSPQNDVFEVRIP 563
            AE   +EIN  NMED+ RFCN+Y DL+FQVSEAKM+WVDRLGFDMRL SPQ   F+VRIP
Sbjct: 215  AEAFANEINNKNMEDVSRFCNVYVDLDFQVSEAKMIWVDRLGFDMRLWSPQKGTFDVRIP 274

Query: 562  FPREVADEKGAKSSFNCMSQLAWEMEKNYHAHDFNKVKQLKKIT 431
            FPREV D KGAKSSFN MSQLAWE+EKNY   +F KV+QLK+IT
Sbjct: 275  FPREVTDVKGAKSSFNGMSQLAWEVEKNYQTLNFKKVQQLKQIT 318


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