BLASTX nr result

ID: Panax21_contig00005957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005957
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...   151   5e-35
emb|CBI33864.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266...   150   8e-35
ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycin...   149   2e-34
ref|XP_004165054.1| PREDICTED: RNA-binding protein 34-like [Cucu...   147   9e-34

>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/95 (76%), Positives = 85/95 (89%)
 Frame = -3

Query: 287 KRKTLDSAEDMLASKEGFDDEDKLLRTVFVGNLPLKVKKKALLREFSQFGDVDSVRIRSV 108
           KRKTLD   DM+ SKEGFDDEDKLLRTVFVGNLPLKVKKK LL+EF +FG+V+SVRIRSV
Sbjct: 168 KRKTLDDPADMMVSKEGFDDEDKLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSV 227

Query: 107 PIVNSKTPRKGAIIKKQLNDSVDSVHAYIVFKTEE 3
           PI ++K PRKGAI+ K++ND+ DSVHAYIVFKTE+
Sbjct: 228 PIQDTKKPRKGAILAKKINDAADSVHAYIVFKTEQ 262


>emb|CBI33864.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/95 (78%), Positives = 86/95 (90%)
 Frame = -3

Query: 287 KRKTLDSAEDMLASKEGFDDEDKLLRTVFVGNLPLKVKKKALLREFSQFGDVDSVRIRSV 108
           KRK++ +  +ML SKEGFDDE KLLRTVFVGNLPLK+KKKALL+EFS FG+V SVRIRSV
Sbjct: 115 KRKSVVNPAEMLVSKEGFDDESKLLRTVFVGNLPLKIKKKALLKEFSVFGEVQSVRIRSV 174

Query: 107 PIVNSKTPRKGAIIKKQLNDSVDSVHAYIVFKTEE 3
           PI++SK PRKGAII K++NDSVDSVHAYIVFKTEE
Sbjct: 175 PILDSKKPRKGAIISKKINDSVDSVHAYIVFKTEE 209


>ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
          Length = 541

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/95 (78%), Positives = 86/95 (90%)
 Frame = -3

Query: 287 KRKTLDSAEDMLASKEGFDDEDKLLRTVFVGNLPLKVKKKALLREFSQFGDVDSVRIRSV 108
           KRK++ +  +ML SKEGFDDE KLLRTVFVGNLPLK+KKKALL+EFS FG+V SVRIRSV
Sbjct: 187 KRKSVVNPAEMLVSKEGFDDESKLLRTVFVGNLPLKIKKKALLKEFSVFGEVQSVRIRSV 246

Query: 107 PIVNSKTPRKGAIIKKQLNDSVDSVHAYIVFKTEE 3
           PI++SK PRKGAII K++NDSVDSVHAYIVFKTEE
Sbjct: 247 PILDSKKPRKGAIISKKINDSVDSVHAYIVFKTEE 281


>ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 515

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/95 (75%), Positives = 85/95 (89%)
 Frame = -3

Query: 287 KRKTLDSAEDMLASKEGFDDEDKLLRTVFVGNLPLKVKKKALLREFSQFGDVDSVRIRSV 108
           KRKTLD   DM+ SKEGFD+EDKLLRTVFVGNLPLKVKKK LL+EF +FG+V+SVRIRSV
Sbjct: 164 KRKTLDDPADMMVSKEGFDNEDKLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSV 223

Query: 107 PIVNSKTPRKGAIIKKQLNDSVDSVHAYIVFKTEE 3
           PI ++K PRKGAI+ K++ND+ DSVHAYIVFKTE+
Sbjct: 224 PIQDTKKPRKGAILAKKINDAADSVHAYIVFKTEQ 258


>ref|XP_004165054.1| PREDICTED: RNA-binding protein 34-like [Cucumis sativus]
          Length = 410

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/97 (76%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
 Frame = -3

Query: 287 KRKTLDSAEDMLASKEGFDDEDKLLRTVFVGNLPLKVKKKALLREFSQFGDVDSVRIRSV 108
           KRK LD   +ML +KEGFDDE KLLRTVFVGNLPLKVKKKAL +EFSQFG++DSVRIRSV
Sbjct: 42  KRKALDDPSEMLVTKEGFDDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSV 101

Query: 107 P--IVNSKTPRKGAIIKKQLNDSVDSVHAYIVFKTEE 3
           P  I NSK PRKGAII K+LN++ DS HAY+VFKTEE
Sbjct: 102 PIDIANSKKPRKGAIISKKLNEAADSSHAYVVFKTEE 138


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