BLASTX nr result

ID: Panax21_contig00005918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005918
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241...   171   7e-41
ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|NP_198971.1| DET1- and DDB1-associated protein 1 [Arabidopsi...   153   2e-35
ref|XP_002868586.1| hypothetical protein ARALYDRAFT_493832 [Arab...   152   3e-35
ref|XP_004143885.1| PREDICTED: uncharacterized protein LOC101213...   150   1e-34

>ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241601 [Vitis vinifera]
           gi|297742241|emb|CBI34390.3| unnamed protein product
           [Vitis vinifera]
          Length = 95

 Score =  171 bits (433), Expect = 7e-41
 Identities = 81/94 (86%), Positives = 84/94 (89%)
 Frame = -3

Query: 487 MGSILGDLPSFDPHNFSQLRPSDPSNPSKMTPITYHPTHDRTIPPPDQVISSEAKNILLR 308
           MGS LGD PSFDPHNFSQLRPSDPSNPSKM P TYHPTHDRT+PPPDQVIS+E KNILLR
Sbjct: 1   MGSTLGDWPSFDPHNFSQLRPSDPSNPSKMIPATYHPTHDRTLPPPDQVISTETKNILLR 60

Query: 307 HFYMRAEEKLRPKRAASENLTPEHVRKHPRASTS 206
           HFY RAEEKLRPKRAASE+LTPEH  K PRAS S
Sbjct: 61  HFYQRAEEKLRPKRAASEHLTPEHGCKQPRASAS 94


>ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|222845269|gb|EEE82816.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  162 bits (411), Expect = 3e-38
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -3

Query: 487 MGSILGDLPSFDPHNFSQLRPSDPSNPSKMTPITYHPTHDRTIPPPDQVISSEAKNILLR 308
           MGS+LGD PSFDPHNFSQLRPSDPSNPSKMTP TYHPTH RT+PPPDQVI++EAKNILLR
Sbjct: 1   MGSLLGDWPSFDPHNFSQLRPSDPSNPSKMTPATYHPTHSRTLPPPDQVITTEAKNILLR 60

Query: 307 HFYMRAEEKLRPKRAASENLTPEHVRKHPRASTS 206
           +FY RAEEKLR KRAASE+L PEH  K  RASTS
Sbjct: 61  NFYERAEEKLRQKRAASEHLMPEHGCKQARASTS 94


>ref|NP_198971.1| DET1- and DDB1-associated protein 1 [Arabidopsis thaliana]
           gi|10178010|dbj|BAB11462.1| unnamed protein product
           [Arabidopsis thaliana] gi|30725336|gb|AAP37690.1|
           At5g41560 [Arabidopsis thaliana]
           gi|110736600|dbj|BAF00265.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007309|gb|AED94692.1| DET1-
           and DDB1-associated protein 1 [Arabidopsis thaliana]
          Length = 101

 Score =  153 bits (387), Expect = 2e-35
 Identities = 71/96 (73%), Positives = 82/96 (85%)
 Frame = -3

Query: 487 MGSILGDLPSFDPHNFSQLRPSDPSNPSKMTPITYHPTHDRTIPPPDQVISSEAKNILLR 308
           M SILGDLPSFDPHNFSQ RPSDPSNPSKM P TY PTH+RT+PPPDQVI++E KNIL+R
Sbjct: 1   MASILGDLPSFDPHNFSQHRPSDPSNPSKMVPTTYRPTHNRTLPPPDQVITTEVKNILIR 60

Query: 307 HFYMRAEEKLRPKRAASENLTPEHVRKHPRASTSKA 200
            FY RAEEKLRPKR A+++L  EHV KH RA++S +
Sbjct: 61  SFYQRAEEKLRPKRPATDHLAAEHVNKHFRAASSSS 96


>ref|XP_002868586.1| hypothetical protein ARALYDRAFT_493832 [Arabidopsis lyrata subsp.
           lyrata] gi|297314422|gb|EFH44845.1| hypothetical protein
           ARALYDRAFT_493832 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/96 (72%), Positives = 82/96 (85%)
 Frame = -3

Query: 487 MGSILGDLPSFDPHNFSQLRPSDPSNPSKMTPITYHPTHDRTIPPPDQVISSEAKNILLR 308
           M SILGDLPSFDPHNFSQ RPSDPSNPS+M P TY PTH+RT+PPPDQVI++E KNIL+R
Sbjct: 1   MASILGDLPSFDPHNFSQHRPSDPSNPSRMVPTTYRPTHNRTLPPPDQVITTEVKNILIR 60

Query: 307 HFYMRAEEKLRPKRAASENLTPEHVRKHPRASTSKA 200
            FY RAEEKLRPKR A+++L  EHV KH RA++S +
Sbjct: 61  SFYQRAEEKLRPKRPATDHLAAEHVNKHFRAASSSS 96


>ref|XP_004143885.1| PREDICTED: uncharacterized protein LOC101213287 [Cucumis sativus]
           gi|449519112|ref|XP_004166579.1| PREDICTED:
           uncharacterized LOC101213287 [Cucumis sativus]
          Length = 98

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/94 (73%), Positives = 78/94 (82%)
 Frame = -3

Query: 487 MGSILGDLPSFDPHNFSQLRPSDPSNPSKMTPITYHPTHDRTIPPPDQVISSEAKNILLR 308
           MGS+LGDLPS+DPHNFSQLRPSDPS PSKM P TYHPTH RT+PPPDQVI++EAKNIL+R
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 307 HFYMRAEEKLRPKRAASENLTPEHVRKHPRASTS 206
           H Y   EEK R KR A+E+  PEH  K PRAST+
Sbjct: 61  HIYQHTEEKSRTKRPAAEHPMPEHGSKQPRASTT 94


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