BLASTX nr result

ID: Panax21_contig00005909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005909
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation...   280   8e-74
ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation...   277   9e-73
ref|XP_002529804.1| eukaryotic translation initiation factor 3 s...   273   1e-71
ref|XP_003621704.1| Eukaryotic translation initiation factor 3 s...   273   2e-71
gb|ABK92468.1| unknown [Populus trichocarpa]                          272   2e-71

>ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H
           [Vitis vinifera] gi|296089621|emb|CBI39440.3| unnamed
           protein product [Vitis vinifera]
          Length = 337

 Score =  280 bits (717), Expect = 8e-74
 Identities = 141/156 (90%), Positives = 144/156 (92%)
 Frame = +3

Query: 87  TTVRSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPALVTGQLLGLDVGSVLEVT 266
           T  RSFLQVAATEEVASPLRVVQIEGL ILKIIKHCKEFSPALVTGQLLGLDVGSVLEVT
Sbjct: 4   TMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVT 63

Query: 267 NCFPFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELIETFM 446
           NCFPFPIR         GANYQLEMMRCLREVNVDNNTVGWYQSTLLGS+QTVELIETFM
Sbjct: 64  NCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFM 123

Query: 447 NYQENIKRCVCIIYDPSKSNQGVLALKALKLSDSFM 554
           NYQENI+RCVCIIYDPS+SNQGVLALKALKLSDSFM
Sbjct: 124 NYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFM 159


>ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           H-like [Cucumis sativus]
           gi|449521699|ref|XP_004167867.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit H-like [Cucumis
           sativus]
          Length = 337

 Score =  277 bits (708), Expect = 9e-73
 Identities = 139/153 (90%), Positives = 141/153 (92%)
 Frame = +3

Query: 96  RSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCF 275
           RSFLQVAATEEVASPLRVVQIEGL ILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCF
Sbjct: 7   RSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCF 66

Query: 276 PFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELIETFMNYQ 455
           PFP R         GANYQLEMMRCLREVNVDNNTVGWYQST LGSYQTVELIETFMNYQ
Sbjct: 67  PFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQ 126

Query: 456 ENIKRCVCIIYDPSKSNQGVLALKALKLSDSFM 554
           ENI+RCVCIIYDPS+SNQGVLALKALKLSDSFM
Sbjct: 127 ENIRRCVCIIYDPSRSNQGVLALKALKLSDSFM 159


>ref|XP_002529804.1| eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223530715|gb|EEF32586.1|
           eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 341

 Score =  273 bits (699), Expect = 1e-71
 Identities = 137/156 (87%), Positives = 141/156 (90%)
 Frame = +3

Query: 87  TTVRSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPALVTGQLLGLDVGSVLEVT 266
           T  RSFLQVA+TEEVA PLRVVQIEGL ILKIIKHCKEFSPALVTGQLLGLDVGSVLEVT
Sbjct: 7   TVTRSFLQVASTEEVAPPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVT 66

Query: 267 NCFPFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELIETFM 446
           NCFPFPIR         GANYQLEMMRCLREVNVDNNTVGWYQSTLLGS+QTVELIETFM
Sbjct: 67  NCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFM 126

Query: 447 NYQENIKRCVCIIYDPSKSNQGVLALKALKLSDSFM 554
           NYQENI RCVCIIYDPS+S QGVLALKALKLSD+FM
Sbjct: 127 NYQENISRCVCIIYDPSRSEQGVLALKALKLSDAFM 162


>ref|XP_003621704.1| Eukaryotic translation initiation factor 3 subunit [Medicago
           truncatula] gi|124360846|gb|ABN08818.1| Mov34-1
           [Medicago truncatula] gi|355496719|gb|AES77922.1|
           Eukaryotic translation initiation factor 3 subunit
           [Medicago truncatula]
          Length = 339

 Score =  273 bits (697), Expect = 2e-71
 Identities = 135/160 (84%), Positives = 144/160 (90%)
 Frame = +3

Query: 75  MAQTTTVRSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPALVTGQLLGLDVGSV 254
           MA TT  RSFLQ  ATEEVA+PLRVVQ+EGL ILKIIKHCK+ SP+LVTGQLLGLDVGSV
Sbjct: 1   MATTTATRSFLQAVATEEVATPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSV 60

Query: 255 LEVTNCFPFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELI 434
           LEVTNCFPFP+R         GANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELI
Sbjct: 61  LEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELI 120

Query: 435 ETFMNYQENIKRCVCIIYDPSKSNQGVLALKALKLSDSFM 554
           ETFMNYQENI+RCVCIIYDPS+++QGVLALKALKLSDSFM
Sbjct: 121 ETFMNYQENIRRCVCIIYDPSRADQGVLALKALKLSDSFM 160


>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score =  272 bits (696), Expect = 2e-71
 Identities = 138/163 (84%), Positives = 144/163 (88%), Gaps = 3/163 (1%)
 Frame = +3

Query: 75  MAQTTT---VRSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPALVTGQLLGLDV 245
           MA TTT    RSFLQVAATEEVA PLR VQIEGLA+LKIIKHCKEFSP+LVTGQLLGLDV
Sbjct: 1   MANTTTPTMARSFLQVAATEEVAPPLRAVQIEGLAVLKIIKHCKEFSPSLVTGQLLGLDV 60

Query: 246 GSVLEVTNCFPFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTV 425
           GSVLEVTNCFPFPIR         GANYQLEMMRCLREVNVDNNTVGWYQS L G +QTV
Sbjct: 61  GSVLEVTNCFPFPIREEDEEIEAEGANYQLEMMRCLREVNVDNNTVGWYQSMLFGCFQTV 120

Query: 426 ELIETFMNYQENIKRCVCIIYDPSKSNQGVLALKALKLSDSFM 554
           ELIETFMNYQENI+RCVCIIYDPS++NQGVLALKALKLSDSFM
Sbjct: 121 ELIETFMNYQENIRRCVCIIYDPSRANQGVLALKALKLSDSFM 163


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