BLASTX nr result

ID: Panax21_contig00005904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005904
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45159.1| unknown [Lotus japonicus]                              565   e-159
ref|XP_002302357.1| precursor of transferase serine hydroxymethy...   563   e-158
gb|ABO61378.1| mitochondrial serine hydroxymethyltransferase [Po...   563   e-158
ref|XP_002527226.1| serine hydroxymethyltransferase, putative [R...   562   e-158
ref|XP_004148411.1| PREDICTED: serine hydroxymethyltransferase, ...   561   e-158

>gb|AFK45159.1| unknown [Lotus japonicus]
          Length = 516

 Score =  565 bits (1456), Expect = e-159
 Identities = 280/300 (93%), Positives = 291/300 (97%)
 Frame = +3

Query: 3    CQKRALEVFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQT 182
            CQKRALE F+LDPAKWGVNVQ LSGSP+NF VYTALLKPHDRIMALDLPHGGHLSHGYQT
Sbjct: 124  CQKRALEAFRLDPAKWGVNVQPLSGSPSNFHVYTALLKPHDRIMALDLPHGGHLSHGYQT 183

Query: 183  DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAVLFRPKLIVAGASAYAQLYDYERIR 362
            DTKKISAVSIFFETMPYRLDESTGYIDYDQLE SA LFRPKLIVAGASAYA+LYDY+RIR
Sbjct: 184  DTKKISAVSIFFETMPYRLDESTGYIDYDQLEASAKLFRPKLIVAGASAYARLYDYDRIR 243

Query: 363  KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 542
            KVCDKQKAVLLADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKGVKE
Sbjct: 244  KVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKE 303

Query: 543  INKQGQEVMYDYEDKINQAVFPGLQGGPHNQTITALAVALKQAKTPEYKAYQEQVLSNCS 722
            INKQG+EV+YDYEDKINQAVFPGLQGGPHN TIT LAVALKQA TPEYKAYQEQVLSNCS
Sbjct: 304  INKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCS 363

Query: 723  IFAKSLSERGYEVVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM 902
             FA++LSERGYE+VSGGTENHLVLVNL+NKGIDGSRVEKVLESVHIAANKNTVPGDVSAM
Sbjct: 364  KFAQALSERGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM 423


>ref|XP_002302357.1| precursor of transferase serine hydroxymethyltransferase 3 [Populus
            trichocarpa] gi|222844083|gb|EEE81630.1| precursor of
            transferase serine hydroxymethyltransferase 3 [Populus
            trichocarpa]
          Length = 516

 Score =  563 bits (1452), Expect = e-158
 Identities = 280/300 (93%), Positives = 290/300 (96%)
 Frame = +3

Query: 3    CQKRALEVFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQT 182
            CQKRALE F LDP KWGVNVQSLSGSPANFQVYTALLKPH+RIMALDLPHGGHLSHGYQT
Sbjct: 125  CQKRALEAFGLDPQKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQT 184

Query: 183  DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAVLFRPKLIVAGASAYAQLYDYERIR 362
            DTKKISAVSIFFETMPYRL+ESTGY+DYDQLEKSA LFRPKLIVAGASAYA+LYDY RIR
Sbjct: 185  DTKKISAVSIFFETMPYRLNESTGYVDYDQLEKSATLFRPKLIVAGASAYARLYDYARIR 244

Query: 363  KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 542
            KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE
Sbjct: 245  KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 304

Query: 543  INKQGQEVMYDYEDKINQAVFPGLQGGPHNQTITALAVALKQAKTPEYKAYQEQVLSNCS 722
            INKQG+EVMYDYEDKINQAVFPGLQGGPHN TI+ LAVALKQA+TPEYKAYQEQVLSNCS
Sbjct: 305  INKQGKEVMYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQARTPEYKAYQEQVLSNCS 364

Query: 723  IFAKSLSERGYEVVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM 902
             FA+SL E+GYE+VSGGTENHLVLVNLRNKGIDGSRVEKVLE VHIAANKNTVPGDVSAM
Sbjct: 365  KFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLELVHIAANKNTVPGDVSAM 424


>gb|ABO61378.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
          Length = 516

 Score =  563 bits (1452), Expect = e-158
 Identities = 280/300 (93%), Positives = 290/300 (96%)
 Frame = +3

Query: 3    CQKRALEVFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQT 182
            CQKRALE F LDP KWGVNVQSLSGSPANFQVYTALLKPH+RIMALDLPHGGHLSHGYQT
Sbjct: 125  CQKRALEAFGLDPQKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQT 184

Query: 183  DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAVLFRPKLIVAGASAYAQLYDYERIR 362
            DTKKISAVSIFFETMPYRL+ESTGY+DYDQLEKSA LFRPKLIVAGASAYA+LYDY RIR
Sbjct: 185  DTKKISAVSIFFETMPYRLNESTGYVDYDQLEKSATLFRPKLIVAGASAYARLYDYARIR 244

Query: 363  KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 542
            KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE
Sbjct: 245  KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 304

Query: 543  INKQGQEVMYDYEDKINQAVFPGLQGGPHNQTITALAVALKQAKTPEYKAYQEQVLSNCS 722
            INKQG+EVMYDYEDKINQAVFPGLQGGPHN TI+ LAVALKQA+TPEYKAYQEQVLSNCS
Sbjct: 305  INKQGKEVMYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQARTPEYKAYQEQVLSNCS 364

Query: 723  IFAKSLSERGYEVVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM 902
             FA+SL E+GYE+VSGGTENHLVLVNLRNKGIDGSRVEKVLE VHIAANKNTVPGDVSAM
Sbjct: 365  KFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLELVHIAANKNTVPGDVSAM 424


>ref|XP_002527226.1| serine hydroxymethyltransferase, putative [Ricinus communis]
            gi|223533402|gb|EEF35152.1| serine
            hydroxymethyltransferase, putative [Ricinus communis]
          Length = 515

 Score =  562 bits (1448), Expect = e-158
 Identities = 275/300 (91%), Positives = 294/300 (98%)
 Frame = +3

Query: 3    CQKRALEVFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQT 182
            CQKRALE F+LDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQT
Sbjct: 126  CQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQT 185

Query: 183  DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAVLFRPKLIVAGASAYAQLYDYERIR 362
            DTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSAVLFRPKLIVAGASAYA+LYDYERIR
Sbjct: 186  DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYERIR 245

Query: 363  KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 542
            KVCDKQKA+LLADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIF+RKGVKE
Sbjct: 246  KVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKE 305

Query: 543  INKQGQEVMYDYEDKINQAVFPGLQGGPHNQTITALAVALKQAKTPEYKAYQEQVLSNCS 722
            +NKQG+EV+YDYEDKINQ+VFPGLQGGPHN TIT LAVALKQA T EYKAYQEQVLSNC+
Sbjct: 306  VNKQGKEVLYDYEDKINQSVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNCA 365

Query: 723  IFAKSLSERGYEVVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM 902
             FA++L+++GYE+VSGGTENHLVLVNL+NKGIDGSRVEKVLE+VHIAANKNTVPGDVSAM
Sbjct: 366  KFAQTLAQKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAM 425


>ref|XP_004148411.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
            [Cucumis sativus] gi|449523215|ref|XP_004168619.1|
            PREDICTED: serine hydroxymethyltransferase,
            mitochondrial-like [Cucumis sativus]
          Length = 516

 Score =  561 bits (1447), Expect = e-158
 Identities = 277/300 (92%), Positives = 290/300 (96%)
 Frame = +3

Query: 3    CQKRALEVFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQT 182
            CQKRALE F+LDPAKWGVNVQSLSGSPANFQ YTALLKPH+RIMALDLPHGGHLSHGYQT
Sbjct: 124  CQKRALEAFRLDPAKWGVNVQSLSGSPANFQAYTALLKPHERIMALDLPHGGHLSHGYQT 183

Query: 183  DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAVLFRPKLIVAGASAYAQLYDYERIR 362
            DTKKISAVSIFFETMPYRLDESTGYIDYDQLE+SA LFRPKLIVAGASAYA+LYDY RIR
Sbjct: 184  DTKKISAVSIFFETMPYRLDESTGYIDYDQLERSASLFRPKLIVAGASAYARLYDYARIR 243

Query: 363  KVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 542
            KVCDKQKAV+LADMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIFFRKGVKE
Sbjct: 244  KVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRKGVKE 303

Query: 543  INKQGQEVMYDYEDKINQAVFPGLQGGPHNQTITALAVALKQAKTPEYKAYQEQVLSNCS 722
            INK+GQEV+YDYEDKINQAVFPGLQGGPHN TI  LAVALKQA TPEYKAYQEQVLSNCS
Sbjct: 304  INKKGQEVLYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTPEYKAYQEQVLSNCS 363

Query: 723  IFAKSLSERGYEVVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM 902
             FA+SL E+GYE+VSGGT+NHLVLVNL+NKGIDGSRVEKVLESVHIAANKNTVPGDVSAM
Sbjct: 364  KFAQSLIEKGYELVSGGTDNHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM 423


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