BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005874
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-conta...   146   2e-33
ref|NP_567594.1| RNA recognition motif-containing protein [Arabi...   146   3e-33
ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein ...   145   4e-33
gb|AAM63455.1| unknown [Arabidopsis thaliana]                         145   6e-33
ref|XP_002533421.1| RNA binding protein, putative [Ricinus commu...   143   2e-32

>ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform 1 [Cucumis sativus]
           gi|449490646|ref|XP_004158665.1| PREDICTED: multiple
           RNA-binding domain-containing protein 1-like isoform 1
           [Cucumis sativus]
          Length = 158

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/107 (67%), Positives = 86/107 (80%)
 Frame = -2

Query: 449 LRASFFDFPLASKIMVRNLSYSTTESCLQKEFSNFGEISEVKLVKDEARKKSKGYAFIQY 270
           LRASFFD+PLAS++MVRNL YST ES LQ+EFSNFGEI+EV L KD + K+ KGYAFIQY
Sbjct: 34  LRASFFDYPLASRLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQY 93

Query: 269 NSQEAALQALESMDRKYVDGRVIHVEIAKPDKRSYGRYPKTSGPPKE 129
             Q+ A+ ALE+MD K  DGR+I+VEIA P   S+G YP+ SGPPKE
Sbjct: 94  TCQDDAMLALETMDCKIFDGRMIYVEIATPGSGSFGGYPRASGPPKE 140


>ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|51971865|dbj|BAD44597.1| putative protein
           [Arabidopsis thaliana] gi|107738041|gb|ABF83619.1|
           At4g20030 [Arabidopsis thaliana]
           gi|332658864|gb|AEE84264.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 152

 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/136 (53%), Positives = 106/136 (77%)
 Frame = -2

Query: 536 WNTNMATNLWSSSSPISIPNHLNTKPLKPLRASFFDFPLASKIMVRNLSYSTTESCLQKE 357
           W+  ++   + +SS  S+PN+ N +  K ++AS F++PLASKIMVRNL +ST+E  L++E
Sbjct: 2   WSATLSFPSFVASSS-SLPNYRNLRFPK-IKASLFNYPLASKIMVRNLPFSTSEDFLKRE 59

Query: 356 FSNFGEISEVKLVKDEARKKSKGYAFIQYNSQEAALQALESMDRKYVDGRVIHVEIAKPD 177
           FS FGEI+EVKL+KDEA K+SKGYAFIQ+ SQ+ A  A+E+MDR+  +GR+I+++IAKP 
Sbjct: 60  FSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPG 119

Query: 176 KRSYGRYPKTSGPPKE 129
           KR +   P+TSGPP++
Sbjct: 120 KRDFQGLPRTSGPPEK 135


>ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich
           RNA-binding protein 2-like [Vitis vinifera]
           gi|297738010|emb|CBI27211.3| unnamed protein product
           [Vitis vinifera] gi|297738011|emb|CBI27212.3| unnamed
           protein product [Vitis vinifera]
          Length = 140

 Score =  145 bits (367), Expect = 4e-33
 Identities = 69/107 (64%), Positives = 88/107 (82%)
 Frame = -2

Query: 449 LRASFFDFPLASKIMVRNLSYSTTESCLQKEFSNFGEISEVKLVKDEARKKSKGYAFIQY 270
           LRAS FD PLAS+IMV NLSY+T++S LQ+EFS FG+I EV +VKD+A K+ +GYAFIQY
Sbjct: 27  LRASLFDHPLASRIMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQY 86

Query: 269 NSQEAALQALESMDRKYVDGRVIHVEIAKPDKRSYGRYPKTSGPPKE 129
            SQ+ A+ ALE+MD KY+DGRV+ VE+AKP K  +GRYP+T GPP +
Sbjct: 87  TSQDHAMLALENMDHKYLDGRVVCVELAKPGKNDFGRYPRTCGPPSK 133


>gb|AAM63455.1| unknown [Arabidopsis thaliana]
          Length = 152

 Score =  145 bits (366), Expect = 6e-33
 Identities = 73/145 (50%), Positives = 110/145 (75%)
 Frame = -2

Query: 536 WNTNMATNLWSSSSPISIPNHLNTKPLKPLRASFFDFPLASKIMVRNLSYSTTESCLQKE 357
           W+  ++   + +SS  S+PN+ N +  K ++AS F++PLASKIMVRNL +ST+E  L++E
Sbjct: 2   WSATLSFPSFVASSS-SLPNYRNRRFPK-IKASLFNYPLASKIMVRNLPFSTSEDFLKRE 59

Query: 356 FSNFGEISEVKLVKDEARKKSKGYAFIQYNSQEAALQALESMDRKYVDGRVIHVEIAKPD 177
           FS FGEI+EVKL+KDEA ++SKGYAFIQ+ SQ+ A  A+E+MDR+  +GR+I+++IAKP 
Sbjct: 60  FSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPG 119

Query: 176 KRSYGRYPKTSGPPKEHNLLAQDEN 102
           KR +   P+TSGPP++ ++  +  N
Sbjct: 120 KRDFQGLPRTSGPPEKSDVPEEAAN 144


>ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
           gi|223526734|gb|EEF28964.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 152

 Score =  143 bits (361), Expect = 2e-32
 Identities = 79/133 (59%), Positives = 98/133 (73%), Gaps = 4/133 (3%)
 Frame = -2

Query: 491 ISIPNHLNTKPLK-PLRASFF---DFPLASKIMVRNLSYSTTESCLQKEFSNFGEISEVK 324
           ISIP+  N K     LRASF    +FPLAS+I+V+NL YS  ES LQKEFSNFGEI+EVK
Sbjct: 15  ISIPSRPNGKSSTLNLRASFSSTSNFPLASRIIVKNLGYSVGESSLQKEFSNFGEIAEVK 74

Query: 323 LVKDEARKKSKGYAFIQYNSQEAALQALESMDRKYVDGRVIHVEIAKPDKRSYGRYPKTS 144
           LVKD+ RK+SK + FIQY  Q+ A+ A+E+MDRK  DGR+I+V++AKP K ++  YPK S
Sbjct: 75  LVKDDERKRSKAFVFIQYTCQDDAILAMENMDRKIFDGRLIYVDLAKPGKETFRGYPKAS 134

Query: 143 GPPKEHNLLAQDE 105
           GPP  H L  QDE
Sbjct: 135 GPPPLH-LREQDE 146