BLASTX nr result

ID: Panax21_contig00005865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005865
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]                            83   3e-14
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]                 80   1e-13
emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera]    77   1e-12
emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera]    77   2e-12
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]    74   1e-11

>gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
          Length = 1470

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
 Frame = -1

Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360
           M+VS+Y  +F +LSR+AP  V+ +E+    FL GL   +   L SH F  +  ++N+A  
Sbjct: 139 MSVSEYRDRFTQLSRYAPEEVDTDEKRQERFLEGLIGPLNYQLQSHTFPNFQTLLNKAIG 198

Query: 359 LERDNEYVQPRDHNQGHTGDSSHQSDDNQRGG---KNTDKGGNH----SGGNRGHDNRRG 201
           LE   + +   DH +   G SS  +  N   G   ++ ++GGN+      G +G  N + 
Sbjct: 199 LESKRKELS--DHKRKFQGQSSRNTRPNNAQGSQFRSGNQGGNNYQVQRSGQQGQRNNQS 256

Query: 200 ESSGNFRKRRFNNDGKTSXXXXXXXTNSRGGERPPVR---CYKCGKEGHISPNCPQQSK 33
           ++      +     G  S        N++     PV+   C+KCG+ GH + NCP++++
Sbjct: 257 QNQQRSNPQTNQRSGGNSQNRQGGTNNTQARNNAPVQPNGCFKCGELGHYANNCPRRNQ 315


>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
          Length = 1484

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
 Frame = -1

Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360
           MTV++Y   F +L+R+AP+ V  +    R+F++GL  E+R  L  + +  +  +VNRA +
Sbjct: 176 MTVAEYHDTFEQLARYAPNDVREDADKQRLFMKGLYYELRLQLAGNTYPTFQALVNRAIV 235

Query: 359 LE--RDNEYVQPRDHNQGHTGD-----SSHQSDDNQRGGKNTDKGGNHSGGNRGHDNRRG 201
           L+  R ++  + R   QG   +     SSHQ    +  G  +    N       + ++ G
Sbjct: 236 LDNMRKSQDKKRRMLAQGSGSNNRQRFSSHQGHQQRFQGPVSQWNRNQQPQRFQNQSQSG 295

Query: 200 ESSGNFRKRRFNND--GKTSXXXXXXXTNS--RGGERPPVRCYKCGKEGHISPNCPQQSK 33
                F++R  N    G+ +        NS  R     P RC++CGKEGH+S +CP++  
Sbjct: 296 NQRPPFQQRNHNQQQHGQQAPRPGNPNANSTKRSASNTPTRCFRCGKEGHMSYDCPEKFN 355

Query: 32  VCYN 21
             YN
Sbjct: 356 PQYN 359


>emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera]
          Length = 279

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 53/169 (31%), Positives = 79/169 (46%)
 Frame = -1

Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360
           +TV+QYEAKF ELSRFA  L+  EE+ T  F  GLKP ++  +   K  +YS VV+RA +
Sbjct: 80  ITVAQYEAKFTELSRFARQLIAIEEKKTLKFQDGLKPYLKNKISILKLNVYSGVVDRALI 139

Query: 359 LERDNEYVQPRDHNQGHTGDSSHQSDDNQRGGKNTDKGGNHSGGNRGHDNRRGESSGNFR 180
            E+DN+ +Q              Q  + QR    +D      G +   + +R  S  +  
Sbjct: 140 AEKDNKELQ--------------QYREQQRKSSKSD------GAHDNQEPKRFSSVESHI 179

Query: 179 KRRFNNDGKTSXXXXXXXTNSRGGERPPVRCYKCGKEGHISPNCPQQSK 33
           K     +   +         S+   +    C+ CGK GHI  +CP+  K
Sbjct: 180 KGEVVQNLDVTCSICGKKHWSKPCYKESEACFDCGKHGHIIRDCPENKK 228


>emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera]
          Length = 1132

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
 Frame = -1

Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360
           +TV+QYEAKF ELS F+P L+  +E  T  F  GLKP ++      K  +Y +VV+RA +
Sbjct: 141 LTVAQYEAKFTELSCFSPQLIATKEEKTLKFQDGLKPYLKNKTSILKLSIYLEVVDRALI 200

Query: 359 LERDNEYVQPRDHNQGHTGDSSHQSDDNQRGGKNTDKGGNHSGGNRGHDNRRGESSGNFR 180
            ++DNE +              HQ  + QR         N + G  G+  R+  +     
Sbjct: 201 AKKDNEEL--------------HQYKEQQR-------KSNRNDGAHGNQARKKPTPS--- 236

Query: 179 KRRFNNDGKT--SXXXXXXXTNSRGGERPPVRCYK-------CGKEGHISPNCPQQSKVC 27
             R  N GK   +          + G RP   CY+       CGK+GH+  +CP+  K  
Sbjct: 237 --RNQNKGKVTQNLDEICPTCGKKHGGRP---CYREIRAWFGCGKQGHMVRDCPENKKFV 291

Query: 26  YNCGKE 9
           +   KE
Sbjct: 292 FGKPKE 297


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
 Frame = -1

Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIR---QYLIS-HKFFLYSDVVN 372
           M+V++YE +F ELSR A  ++  EE   R F+RGL+ ++R   Q L+S  + FL  DVV+
Sbjct: 244 MSVAEYETRFHELSRHAEMILPTEEERVRCFVRGLRLQLRLETQSLVSAGRSFL--DVVD 301

Query: 371 RAQLLERDNEYVQ----PRDHNQGHTGDSSHQSDD-NQRGGKNTDKGGNH---SGGNRGH 216
            A  +E      Q     R  ++G   DS  +S D + R G+   +G +        +  
Sbjct: 302 HASTMEHLRREAQGGSEKRARHEGSYSDSRPRSRDYHDRVGRRFRQGQSSRPTQASLQAS 361

Query: 215 DNRRGESSGNFRKRRFNNDGKTSXXXXXXXTNSRGGERPPVRCYKCGKEGHISPNCPQQS 36
           D  RGE+S +  +  F +             +   G RP   CY+CG+ GH + +CPQ S
Sbjct: 362 DGGRGEASSSQGREVFQSGSS-------GHGSRSSGSRPRQGCYECGEMGHWARDCPQHS 414

Query: 35  KV 30
           ++
Sbjct: 415 RI 416


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