BLASTX nr result
ID: Panax21_contig00005865
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00005865 (539 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAL59229.1|AF448416_9 gag-pol [Zea mays] 83 3e-14 gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor] 80 1e-13 emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera] 77 1e-12 emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera] 77 2e-12 gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 74 1e-11 >gb|AAL59229.1|AF448416_9 gag-pol [Zea mays] Length = 1470 Score = 82.8 bits (203), Expect = 3e-14 Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 10/179 (5%) Frame = -1 Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360 M+VS+Y +F +LSR+AP V+ +E+ FL GL + L SH F + ++N+A Sbjct: 139 MSVSEYRDRFTQLSRYAPEEVDTDEKRQERFLEGLIGPLNYQLQSHTFPNFQTLLNKAIG 198 Query: 359 LERDNEYVQPRDHNQGHTGDSSHQSDDNQRGG---KNTDKGGNH----SGGNRGHDNRRG 201 LE + + DH + G SS + N G ++ ++GGN+ G +G N + Sbjct: 199 LESKRKELS--DHKRKFQGQSSRNTRPNNAQGSQFRSGNQGGNNYQVQRSGQQGQRNNQS 256 Query: 200 ESSGNFRKRRFNNDGKTSXXXXXXXTNSRGGERPPVR---CYKCGKEGHISPNCPQQSK 33 ++ + G S N++ PV+ C+KCG+ GH + NCP++++ Sbjct: 257 QNQQRSNPQTNQRSGGNSQNRQGGTNNTQARNNAPVQPNGCFKCGELGHYANNCPRRNQ 315 >gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor] Length = 1484 Score = 80.5 bits (197), Expect = 1e-13 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%) Frame = -1 Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360 MTV++Y F +L+R+AP+ V + R+F++GL E+R L + + + +VNRA + Sbjct: 176 MTVAEYHDTFEQLARYAPNDVREDADKQRLFMKGLYYELRLQLAGNTYPTFQALVNRAIV 235 Query: 359 LE--RDNEYVQPRDHNQGHTGD-----SSHQSDDNQRGGKNTDKGGNHSGGNRGHDNRRG 201 L+ R ++ + R QG + SSHQ + G + N + ++ G Sbjct: 236 LDNMRKSQDKKRRMLAQGSGSNNRQRFSSHQGHQQRFQGPVSQWNRNQQPQRFQNQSQSG 295 Query: 200 ESSGNFRKRRFNND--GKTSXXXXXXXTNS--RGGERPPVRCYKCGKEGHISPNCPQQSK 33 F++R N G+ + NS R P RC++CGKEGH+S +CP++ Sbjct: 296 NQRPPFQQRNHNQQQHGQQAPRPGNPNANSTKRSASNTPTRCFRCGKEGHMSYDCPEKFN 355 Query: 32 VCYN 21 YN Sbjct: 356 PQYN 359 >emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera] Length = 279 Score = 77.4 bits (189), Expect = 1e-12 Identities = 53/169 (31%), Positives = 79/169 (46%) Frame = -1 Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360 +TV+QYEAKF ELSRFA L+ EE+ T F GLKP ++ + K +YS VV+RA + Sbjct: 80 ITVAQYEAKFTELSRFARQLIAIEEKKTLKFQDGLKPYLKNKISILKLNVYSGVVDRALI 139 Query: 359 LERDNEYVQPRDHNQGHTGDSSHQSDDNQRGGKNTDKGGNHSGGNRGHDNRRGESSGNFR 180 E+DN+ +Q Q + QR +D G + + +R S + Sbjct: 140 AEKDNKELQ--------------QYREQQRKSSKSD------GAHDNQEPKRFSSVESHI 179 Query: 179 KRRFNNDGKTSXXXXXXXTNSRGGERPPVRCYKCGKEGHISPNCPQQSK 33 K + + S+ + C+ CGK GHI +CP+ K Sbjct: 180 KGEVVQNLDVTCSICGKKHWSKPCYKESEACFDCGKHGHIIRDCPENKK 228 >emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera] Length = 1132 Score = 77.0 bits (188), Expect = 2e-12 Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 9/186 (4%) Frame = -1 Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIRQYLISHKFFLYSDVVNRAQL 360 +TV+QYEAKF ELS F+P L+ +E T F GLKP ++ K +Y +VV+RA + Sbjct: 141 LTVAQYEAKFTELSCFSPQLIATKEEKTLKFQDGLKPYLKNKTSILKLSIYLEVVDRALI 200 Query: 359 LERDNEYVQPRDHNQGHTGDSSHQSDDNQRGGKNTDKGGNHSGGNRGHDNRRGESSGNFR 180 ++DNE + HQ + QR N + G G+ R+ + Sbjct: 201 AKKDNEEL--------------HQYKEQQR-------KSNRNDGAHGNQARKKPTPS--- 236 Query: 179 KRRFNNDGKT--SXXXXXXXTNSRGGERPPVRCYK-------CGKEGHISPNCPQQSKVC 27 R N GK + + G RP CY+ CGK+GH+ +CP+ K Sbjct: 237 --RNQNKGKVTQNLDEICPTCGKKHGGRP---CYREIRAWFGCGKQGHMVRDCPENKKFV 291 Query: 26 YNCGKE 9 + KE Sbjct: 292 FGKPKE 297 >gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] Length = 1475 Score = 74.3 bits (181), Expect = 1e-11 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 12/182 (6%) Frame = -1 Query: 539 MTVSQYEAKFAELSRFAPHLVENEERMTRMFLRGLKPEIR---QYLIS-HKFFLYSDVVN 372 M+V++YE +F ELSR A ++ EE R F+RGL+ ++R Q L+S + FL DVV+ Sbjct: 244 MSVAEYETRFHELSRHAEMILPTEEERVRCFVRGLRLQLRLETQSLVSAGRSFL--DVVD 301 Query: 371 RAQLLERDNEYVQ----PRDHNQGHTGDSSHQSDD-NQRGGKNTDKGGNH---SGGNRGH 216 A +E Q R ++G DS +S D + R G+ +G + + Sbjct: 302 HASTMEHLRREAQGGSEKRARHEGSYSDSRPRSRDYHDRVGRRFRQGQSSRPTQASLQAS 361 Query: 215 DNRRGESSGNFRKRRFNNDGKTSXXXXXXXTNSRGGERPPVRCYKCGKEGHISPNCPQQS 36 D RGE+S + + F + + G RP CY+CG+ GH + +CPQ S Sbjct: 362 DGGRGEASSSQGREVFQSGSS-------GHGSRSSGSRPRQGCYECGEMGHWARDCPQHS 414 Query: 35 KV 30 ++ Sbjct: 415 RI 416