BLASTX nr result

ID: Panax21_contig00005854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005854
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528228.1| ubiquitin-protein ligase, putative [Ricinus ...    61   3e-07
ref|NP_567501.4| armadillo/beta-catenin-like repeat-containing p...    60   4e-07
emb|CAB10425.1| hypothetical protein [Arabidopsis thaliana] gi|7...    60   4e-07
dbj|BAC43324.1| unknown protein [Arabidopsis thaliana]                 60   4e-07
emb|CBI33305.3| unnamed protein product [Vitis vinifera]               59   1e-06

>ref|XP_002528228.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532345|gb|EEF34143.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 467

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = +1

Query: 1   LANKSSKSSGSTTLEESQQFLDFSQAFSDFSACSSDVSGELQRLANL 141
           LA+++SK+  S      + FLD SQAFSDFSACSSD+SGELQRLA L
Sbjct: 88  LASRNSKTEKSAKSSSDEDFLDISQAFSDFSACSSDISGELQRLACL 134


>ref|NP_567501.4| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
           thaliana] gi|332658360|gb|AEE83760.1|
           armadillo/beta-catenin-like repeat-containing protein
           [Arabidopsis thaliana]
          Length = 472

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = +1

Query: 1   LANKSSKSSGSTTLEESQQFLDFSQAFSDFSACSSDVSGELQRLANLRLASAD 159
           L N +S +S +++++E + FLD SQAFSDFSACSSD+SGELQRLA L    AD
Sbjct: 87  LKNSNSLNSNASSMKE-EAFLDISQAFSDFSACSSDISGELQRLACLPSPEAD 138


>emb|CAB10425.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268399|emb|CAB78691.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 459

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = +1

Query: 1   LANKSSKSSGSTTLEESQQFLDFSQAFSDFSACSSDVSGELQRLANLRLASAD 159
           L N +S +S +++++E + FLD SQAFSDFSACSSD+SGELQRLA L    AD
Sbjct: 87  LKNSNSLNSNASSMKE-EAFLDISQAFSDFSACSSDISGELQRLACLPSPEAD 138


>dbj|BAC43324.1| unknown protein [Arabidopsis thaliana]
          Length = 472

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = +1

Query: 1   LANKSSKSSGSTTLEESQQFLDFSQAFSDFSACSSDVSGELQRLANLRLASAD 159
           L N +S +S +++++E + FLD SQAFSDFSACSSD+SGELQRLA L    AD
Sbjct: 87  LKNSNSLNSNASSMKE-EAFLDISQAFSDFSACSSDISGELQRLACLPSPEAD 138


>emb|CBI33305.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = +1

Query: 1   LANKSSKSSGSTTLEESQQFLDFSQAFSDFSACSSDVSGELQRLANL 141
           LA++S+KS+ S + +E  ++LD S AFSDFSACSSD+SGELQRLA+L
Sbjct: 78  LASRSNKSAQSPSQDE--EYLDLSHAFSDFSACSSDISGELQRLASL 122


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