BLASTX nr result
ID: Panax21_contig00005818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00005818
(1149 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003546463.1| PREDICTED: golgin candidate 5-like [Glycine ... 95 4e-17
ref|XP_003543637.1| PREDICTED: golgin candidate 5-like [Glycine ... 95 4e-17
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 94 5e-17
gb|AAG52248.1|AC011717_16 unknown protein; 70672-76070 [Arabidop... 93 1e-16
ref|NP_001185441.1| golgin candidate 5 [Arabidopsis thaliana] gi... 93 1e-16
>ref|XP_003546463.1| PREDICTED: golgin candidate 5-like [Glycine max]
Length = 988
Score = 94.7 bits (234), Expect = 4e-17
Identities = 47/58 (81%), Positives = 54/58 (93%)
Frame = -1
Query: 756 ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
A++ESIRDSLA+ELVKMTEQCEKLRGEA++L G+R+ELEA R RH AALELMGERDEE
Sbjct: 895 ASLESIRDSLADELVKMTEQCEKLRGEAAVLPGLRSELEALRRRHSAALELMGERDEE 952
Score = 63.5 bits (153), Expect = 9e-08
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = -1
Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
RRN+GE M+P+Y++SM P++F+A+LRQKEGELASYMSRL
Sbjct: 855 RRNIGELSMSPYYVKSMTPSSFEAALRQKEGELASYMSRL 894
Score = 57.8 bits (138), Expect = 5e-06
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = -3
Query: 577 IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
+R+ELEALR RH A+LELMG DIVDL EMYR+QVNLLVNK
Sbjct: 928 LRSELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNK 977
>ref|XP_003543637.1| PREDICTED: golgin candidate 5-like [Glycine max]
Length = 989
Score = 94.7 bits (234), Expect = 4e-17
Identities = 47/58 (81%), Positives = 54/58 (93%)
Frame = -1
Query: 756 ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
A++ESIRDSLA+ELVKMTEQCEKLRGEA++L G+R+ELEA R RH AALELMGERDEE
Sbjct: 896 ASLESIRDSLADELVKMTEQCEKLRGEAAVLPGLRSELEALRRRHSAALELMGERDEE 953
Score = 61.2 bits (147), Expect = 5e-07
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = -1
Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
RRN GE M+P+Y++SM P++F+A+LRQKEGELASYMSRL
Sbjct: 856 RRNPGELNMSPYYVKSMTPSSFEAALRQKEGELASYMSRL 895
Score = 57.8 bits (138), Expect = 5e-06
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = -3
Query: 577 IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
+R+ELEALR RH A+LELMG DIVDL EMYR+QVNLLVNK
Sbjct: 929 LRSELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNK 978
>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1218
Score = 94.4 bits (233), Expect = 5e-17
Identities = 39/51 (76%), Positives = 49/51 (96%)
Frame = -3
Query: 154 VYSTVRQLEIAHGTGIDSIRVEYDRKGTSVWTEKHGGDGGNKTDKIKLEYP 2
VYSTVRQL I HG+GIDSI++EYD+KGTS+W+EKHGG+GGN+TDK+KL+YP
Sbjct: 650 VYSTVRQLVIVHGSGIDSIQIEYDKKGTSIWSEKHGGNGGNRTDKVKLDYP 700
Score = 62.8 bits (151), Expect = 2e-07
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 154 VYSTVRQLEIAHGTGIDSIRVEYDRKGTSVWTEKHGGDGGNKTDKIKLEYP 2
V+S ++Q+ + I SI++EYDR G SVW+ +HGG GG T+++KLEYP
Sbjct: 1076 VFSGIKQIFVTRAEAICSIQIEYDRNGQSVWSVRHGGSGGTATNRVKLEYP 1126
Score = 61.2 bits (147), Expect = 5e-07
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -3
Query: 142 VRQLEIAHGTGIDSIRVEYDRKGTSVWTEKHGGDGGNKTDKIKLEYP 2
+RQ+ ++ GI SIRV+YDR G +VW KHGG GG KT+KI +YP
Sbjct: 884 IRQIYLSRSIGIVSIRVQYDRNGQAVWGSKHGGTGGFKTEKITFDYP 930
>gb|AAG52248.1|AC011717_16 unknown protein; 70672-76070 [Arabidopsis thaliana]
Length = 918
Score = 92.8 bits (229), Expect = 1e-16
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = -1
Query: 756 ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
A+MESIRDSLAEELVKMT +CEKLRGEA + GI+AELEA R RH AALELMGERDEE
Sbjct: 834 ASMESIRDSLAEELVKMTAECEKLRGEADRVPGIKAELEALRQRHAAALELMGERDEE 891
Score = 58.5 bits (140), Expect = 3e-06
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = -3
Query: 577 IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
I+AELEALR RH A+LELMG DIVDL EMYR+QVN+LVNK
Sbjct: 867 IKAELEALRQRHAAALELMGERDEELEELRADIVDLKEMYREQVNMLVNK 916
Score = 58.5 bits (140), Expect = 3e-06
Identities = 25/40 (62%), Positives = 37/40 (92%)
Frame = -1
Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
+R++ EA M+P+YM+S+ P+A++A+LRQKEGELASYM+RL
Sbjct: 794 KRSMPEATMSPYYMKSITPSAYEATLRQKEGELASYMTRL 833
>ref|NP_001185441.1| golgin candidate 5 [Arabidopsis thaliana] gi|332198188|gb|AEE36309.1|
golgin candidate 5 [Arabidopsis thaliana]
Length = 976
Score = 92.8 bits (229), Expect = 1e-16
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = -1
Query: 756 ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
A+MESIRDSLAEELVKMT +CEKLRGEA + GI+AELEA R RH AALELMGERDEE
Sbjct: 892 ASMESIRDSLAEELVKMTAECEKLRGEADRVPGIKAELEALRQRHAAALELMGERDEE 949
Score = 58.5 bits (140), Expect(2) = 2e-06
Identities = 25/40 (62%), Positives = 37/40 (92%)
Frame = -1
Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
+R++ EA M+P+YM+S+ P+A++A+LRQKEGELASYM+RL
Sbjct: 852 KRSMPEATMSPYYMKSITPSAYEATLRQKEGELASYMTRL 891
Score = 20.4 bits (41), Expect(2) = 2e-06
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 1102 MEESYFLQ 1079
MEESYFLQ
Sbjct: 833 MEESYFLQ 840
Score = 58.5 bits (140), Expect = 3e-06
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = -3
Query: 577 IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
I+AELEALR RH A+LELMG DIVDL EMYR+QVN+LVNK
Sbjct: 925 IKAELEALRQRHAAALELMGERDEELEELRADIVDLKEMYREQVNMLVNK 974