BLASTX nr result

ID: Panax21_contig00005818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005818
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546463.1| PREDICTED: golgin candidate 5-like [Glycine ...    95   4e-17
ref|XP_003543637.1| PREDICTED: golgin candidate 5-like [Glycine ...    95   4e-17
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...    94   5e-17
gb|AAG52248.1|AC011717_16 unknown protein; 70672-76070 [Arabidop...    93   1e-16
ref|NP_001185441.1| golgin candidate 5 [Arabidopsis thaliana] gi...    93   1e-16

>ref|XP_003546463.1| PREDICTED: golgin candidate 5-like [Glycine max]
          Length = 988

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = -1

Query: 756  ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
            A++ESIRDSLA+ELVKMTEQCEKLRGEA++L G+R+ELEA R RH AALELMGERDEE
Sbjct: 895  ASLESIRDSLADELVKMTEQCEKLRGEAAVLPGLRSELEALRRRHSAALELMGERDEE 952



 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 28/40 (70%), Positives = 37/40 (92%)
 Frame = -1

Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
            RRN+GE  M+P+Y++SM P++F+A+LRQKEGELASYMSRL
Sbjct: 855  RRNIGELSMSPYYVKSMTPSSFEAALRQKEGELASYMSRL 894



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -3

Query: 577  IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
            +R+ELEALR RH A+LELMG           DIVDL EMYR+QVNLLVNK
Sbjct: 928  LRSELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNK 977


>ref|XP_003543637.1| PREDICTED: golgin candidate 5-like [Glycine max]
          Length = 989

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = -1

Query: 756  ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
            A++ESIRDSLA+ELVKMTEQCEKLRGEA++L G+R+ELEA R RH AALELMGERDEE
Sbjct: 896  ASLESIRDSLADELVKMTEQCEKLRGEAAVLPGLRSELEALRRRHSAALELMGERDEE 953



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = -1

Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
            RRN GE  M+P+Y++SM P++F+A+LRQKEGELASYMSRL
Sbjct: 856  RRNPGELNMSPYYVKSMTPSSFEAALRQKEGELASYMSRL 895



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -3

Query: 577  IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
            +R+ELEALR RH A+LELMG           DIVDL EMYR+QVNLLVNK
Sbjct: 929  LRSELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNK 978


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 39/51 (76%), Positives = 49/51 (96%)
 Frame = -3

Query: 154 VYSTVRQLEIAHGTGIDSIRVEYDRKGTSVWTEKHGGDGGNKTDKIKLEYP 2
           VYSTVRQL I HG+GIDSI++EYD+KGTS+W+EKHGG+GGN+TDK+KL+YP
Sbjct: 650 VYSTVRQLVIVHGSGIDSIQIEYDKKGTSIWSEKHGGNGGNRTDKVKLDYP 700



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 37/51 (72%)
 Frame = -3

Query: 154  VYSTVRQLEIAHGTGIDSIRVEYDRKGTSVWTEKHGGDGGNKTDKIKLEYP 2
            V+S ++Q+ +     I SI++EYDR G SVW+ +HGG GG  T+++KLEYP
Sbjct: 1076 VFSGIKQIFVTRAEAICSIQIEYDRNGQSVWSVRHGGSGGTATNRVKLEYP 1126



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = -3

Query: 142  VRQLEIAHGTGIDSIRVEYDRKGTSVWTEKHGGDGGNKTDKIKLEYP 2
            +RQ+ ++   GI SIRV+YDR G +VW  KHGG GG KT+KI  +YP
Sbjct: 884  IRQIYLSRSIGIVSIRVQYDRNGQAVWGSKHGGTGGFKTEKITFDYP 930


>gb|AAG52248.1|AC011717_16 unknown protein; 70672-76070 [Arabidopsis thaliana]
          Length = 918

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = -1

Query: 756  ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
            A+MESIRDSLAEELVKMT +CEKLRGEA  + GI+AELEA R RH AALELMGERDEE
Sbjct: 834  ASMESIRDSLAEELVKMTAECEKLRGEADRVPGIKAELEALRQRHAAALELMGERDEE 891



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -3

Query: 577  IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
            I+AELEALR RH A+LELMG           DIVDL EMYR+QVN+LVNK
Sbjct: 867  IKAELEALRQRHAAALELMGERDEELEELRADIVDLKEMYREQVNMLVNK 916



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 25/40 (62%), Positives = 37/40 (92%)
 Frame = -1

Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
            +R++ EA M+P+YM+S+ P+A++A+LRQKEGELASYM+RL
Sbjct: 794  KRSMPEATMSPYYMKSITPSAYEATLRQKEGELASYMTRL 833


>ref|NP_001185441.1| golgin candidate 5 [Arabidopsis thaliana] gi|332198188|gb|AEE36309.1|
            golgin candidate 5 [Arabidopsis thaliana]
          Length = 976

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = -1

Query: 756  ATMESIRDSLAEELVKMTEQCEKLRGEASMLSGIRAELEAFRWRHLAALELMGERDEE 583
            A+MESIRDSLAEELVKMT +CEKLRGEA  + GI+AELEA R RH AALELMGERDEE
Sbjct: 892  ASMESIRDSLAEELVKMTAECEKLRGEADRVPGIKAELEALRQRHAAALELMGERDEE 949



 Score = 58.5 bits (140), Expect(2) = 2e-06
 Identities = 25/40 (62%), Positives = 37/40 (92%)
 Frame = -1

Query: 1080 RRNLGEAIMNPHYMRSMRPNAFDASLRQKEGELASYMSRL 961
            +R++ EA M+P+YM+S+ P+A++A+LRQKEGELASYM+RL
Sbjct: 852  KRSMPEATMSPYYMKSITPSAYEATLRQKEGELASYMTRL 891



 Score = 20.4 bits (41), Expect(2) = 2e-06
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 1102 MEESYFLQ 1079
            MEESYFLQ
Sbjct: 833  MEESYFLQ 840



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -3

Query: 577  IRAELEALRWRHLASLELMGXXXXXXXXXXXDIVDLTEMYRKQVNLLVNK 428
            I+AELEALR RH A+LELMG           DIVDL EMYR+QVN+LVNK
Sbjct: 925  IKAELEALRQRHAAALELMGERDEELEELRADIVDLKEMYREQVNMLVNK 974


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