BLASTX nr result

ID: Panax21_contig00005797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005797
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309202.1| predicted protein [Populus trichocarpa] gi|2...   210   8e-53
ref|XP_004161102.1| PREDICTED: WD repeat-containing protein 61-l...   210   1e-52
ref|XP_004144016.1| PREDICTED: WD repeat-containing protein 61-l...   210   1e-52
ref|NP_194712.1| WD repeat-containing protein 61 [Arabidopsis th...   206   2e-51
ref|XP_002869408.1| hypothetical protein ARALYDRAFT_913505 [Arab...   205   3e-51

>ref|XP_002309202.1| predicted protein [Populus trichocarpa] gi|222855178|gb|EEE92725.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  210 bits (535), Expect = 8e-53
 Identities = 103/147 (70%), Positives = 124/147 (84%), Gaps = 4/147 (2%)
 Frame = +2

Query: 44  MKLAWLRSQDGAHDDSLWAATWVPATDESPALLLTGSLDETVKLWNPDDLSLIRTNCGHF 223
           MKLA L+S + AHD+S+WAATW+PAT+  PALL+TGSLDETVKLW PD+L+L RTN GH 
Sbjct: 1   MKLAGLKSIENAHDESVWAATWIPATETRPALLMTGSLDETVKLWKPDELTLERTNTGHC 60

Query: 224 LGVVSVAAHPSGKIAASASIDSFIRGFDGESNNPIATLEAPPSEARQLQFNPQG----VA 391
           LGVVSVAAHPSG IAASAS+DSF+R FD +SN  IATLEAPPSE  Q++F+P+G    VA
Sbjct: 61  LGVVSVAAHPSGSIAASASLDSFVRVFDVDSNASIATLEAPPSEVWQMKFDPKGTTLAVA 120

Query: 392 GGGSASVKLWNTAEWKLVGTLSVPRPE 472
           GGGSASV+LW+T +WKL+ TLS+PR E
Sbjct: 121 GGGSASVQLWDTEKWKLIATLSIPRQE 147


>ref|XP_004161102.1| PREDICTED: WD repeat-containing protein 61-like [Cucumis sativus]
          Length = 321

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/147 (70%), Positives = 122/147 (82%), Gaps = 4/147 (2%)
 Frame = +2

Query: 44  MKLAWLRSQDGAHDDSLWAATWVPATDESPALLLTGSLDETVKLWNPDDLSLIRTNCGHF 223
           MKLA L+S + AH++S+WAATWVPATD  P+LLLTGSLDETVKLW  D+L L RTN GH 
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDTRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 224 LGVVSVAAHPSGKIAASASIDSFIRGFDGESNNPIATLEAPPSEARQLQFNPQG----VA 391
           LGVVSVAAHPSG IAASAS+DSF+R F+ +SN+ IATLEAPPSE  Q++FNP+G    VA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 392 GGGSASVKLWNTAEWKLVGTLSVPRPE 472
           GGGSAS+KLW+T  WKL  TLS+PRPE
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPE 147


>ref|XP_004144016.1| PREDICTED: WD repeat-containing protein 61-like [Cucumis sativus]
          Length = 321

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/147 (70%), Positives = 122/147 (82%), Gaps = 4/147 (2%)
 Frame = +2

Query: 44  MKLAWLRSQDGAHDDSLWAATWVPATDESPALLLTGSLDETVKLWNPDDLSLIRTNCGHF 223
           MKLA L+S + AH++S+WAATWVPATD  P+LLLTGSLDETVKLW  D+L L RTN GH 
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDTRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 224 LGVVSVAAHPSGKIAASASIDSFIRGFDGESNNPIATLEAPPSEARQLQFNPQG----VA 391
           LGVVSVAAHPSG IAASAS+DSF+R F+ +SN+ IATLEAPPSE  Q++FNP+G    VA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 392 GGGSASVKLWNTAEWKLVGTLSVPRPE 472
           GGGSAS+KLW+T  WKL  TLS+PRPE
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPE 147


>ref|NP_194712.1| WD repeat-containing protein 61 [Arabidopsis thaliana]
           gi|4914407|emb|CAB43658.1| putative protein [Arabidopsis
           thaliana] gi|7269882|emb|CAB79741.1| putative protein
           [Arabidopsis thaliana] gi|30725340|gb|AAP37692.1|
           At4g29830 [Arabidopsis thaliana]
           gi|332660283|gb|AEE85683.1| WD repeat-containing protein
           61 [Arabidopsis thaliana]
          Length = 321

 Score =  206 bits (524), Expect = 2e-51
 Identities = 100/147 (68%), Positives = 121/147 (82%), Gaps = 4/147 (2%)
 Frame = +2

Query: 44  MKLAWLRSQDGAHDDSLWAATWVPATDESPALLLTGSLDETVKLWNPDDLSLIRTNCGHF 223
           MKLA L+S + AH+DS+WAATWVPAT++ PALLLTGSLDETVKLW PD+L L+RTN GH 
Sbjct: 1   MKLAGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHS 60

Query: 224 LGVVSVAAHPSGKIAASASIDSFIRGFDGESNNPIATLEAPPSEARQLQFNPQG----VA 391
           LGV ++AAHPSG IAAS+SIDSF+R FD ++N  IA LEAPPSE   +QF P+G    VA
Sbjct: 61  LGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA 120

Query: 392 GGGSASVKLWNTAEWKLVGTLSVPRPE 472
           GG SASVKLW+TA W+L+ TLS+PRP+
Sbjct: 121 GGSSASVKLWDTASWRLISTLSIPRPD 147


>ref|XP_002869408.1| hypothetical protein ARALYDRAFT_913505 [Arabidopsis lyrata subsp.
           lyrata] gi|297315244|gb|EFH45667.1| hypothetical protein
           ARALYDRAFT_913505 [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score =  205 bits (522), Expect = 3e-51
 Identities = 99/147 (67%), Positives = 121/147 (82%), Gaps = 4/147 (2%)
 Frame = +2

Query: 44  MKLAWLRSQDGAHDDSLWAATWVPATDESPALLLTGSLDETVKLWNPDDLSLIRTNCGHF 223
           MKLA L+S + AH+DS+WAATWVPAT++ PALLLTGSLDETVKLW PD+L L+RTN GH 
Sbjct: 1   MKLAGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHS 60

Query: 224 LGVVSVAAHPSGKIAASASIDSFIRGFDGESNNPIATLEAPPSEARQLQFNPQG----VA 391
           LGV ++AAHPSG IAAS+S+DSF+R FD ++N  IA LEAPPSE   +QF P+G    VA
Sbjct: 61  LGVAALAAHPSGIIAASSSLDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA 120

Query: 392 GGGSASVKLWNTAEWKLVGTLSVPRPE 472
           GG SASVKLW+T+ W+L+ TLS+PRPE
Sbjct: 121 GGSSASVKLWDTSSWRLISTLSIPRPE 147


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