BLASTX nr result

ID: Panax21_contig00005791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005791
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...   241   4e-62
ref|NP_974953.1| cyclic nucleotide gated channel [Arabidopsis th...   237   6e-61
ref|NP_851209.1| cyclic nucleotide gated channel [Arabidopsis th...   237   6e-61
ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ...   236   1e-60
ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-60

>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score =  241 bits (615), Expect = 4e-62
 Identities = 117/120 (97%), Positives = 118/120 (98%)
 Frame = +3

Query: 3   DPVDEMLFIIRGRLESETTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTR 182
           DPVDEMLFIIRGRLES TTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTR
Sbjct: 540 DPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTR 599

Query: 183 TVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS 362
           TVKALTEVEAFAL A+ELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS
Sbjct: 600 TVKALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS 659


>ref|NP_974953.1| cyclic nucleotide gated channel [Arabidopsis thaliana]
           gi|4581205|emb|CAB40130.1| cyclic nucleotide and
           calmodulin-regulated ion channel [Arabidopsis thaliana]
           gi|9758363|dbj|BAB08864.1| cyclic nucleotide and
           calmodulin-regulated ion channel [Arabidopsis thaliana]
           gi|332009592|gb|AED96975.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
          Length = 710

 Score =  237 bits (605), Expect = 6e-61
 Identities = 114/119 (95%), Positives = 117/119 (98%)
 Frame = +3

Query: 3   DPVDEMLFIIRGRLESETTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTR 182
           DPVDEMLFIIRGRLES TTDGGRSGFFNRSLLKEG+FCGEELLTWALDPKSGVNLPSSTR
Sbjct: 523 DPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTR 582

Query: 183 TVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRY 359
           TVKALTEVEAFALT++ELKFVASQFRRLHSRQVQHTFRFYS QWRTWAACFIQAAWRRY
Sbjct: 583 TVKALTEVEAFALTSEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRY 641


>ref|NP_851209.1| cyclic nucleotide gated channel [Arabidopsis thaliana]
           gi|42568613|ref|NP_200602.2| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
           gi|38503077|sp|Q8RWS9.1|CNGC5_ARATH RecName:
           Full=Probable cyclic nucleotide-gated ion channel 5;
           Short=AtCNGC5; AltName: Full=Cyclic nucleotide- and
           calmodulin-regulated ion channel 5
           gi|20268758|gb|AAM14082.1| putative cyclic nucleotide
           and calmodulin-regulated ion channel [Arabidopsis
           thaliana] gi|21281123|gb|AAM45101.1| putative cyclic
           nucleotide and calmodulin-regulated ion channel
           [Arabidopsis thaliana] gi|222423973|dbj|BAH19948.1|
           AT5G57940 [Arabidopsis thaliana]
           gi|332009591|gb|AED96974.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
           gi|332009593|gb|AED96976.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
          Length = 717

 Score =  237 bits (605), Expect = 6e-61
 Identities = 114/119 (95%), Positives = 117/119 (98%)
 Frame = +3

Query: 3   DPVDEMLFIIRGRLESETTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTR 182
           DPVDEMLFIIRGRLES TTDGGRSGFFNRSLLKEG+FCGEELLTWALDPKSGVNLPSSTR
Sbjct: 530 DPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTR 589

Query: 183 TVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRY 359
           TVKALTEVEAFALT++ELKFVASQFRRLHSRQVQHTFRFYS QWRTWAACFIQAAWRRY
Sbjct: 590 TVKALTEVEAFALTSEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRY 648


>ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5 [Vitis
           vinifera] gi|297743648|emb|CBI36531.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score =  236 bits (602), Expect = 1e-60
 Identities = 115/120 (95%), Positives = 116/120 (96%)
 Frame = +3

Query: 3   DPVDEMLFIIRGRLESETTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTR 182
           DPVDEMLFIIRGRLES TT GGRSGFFNRSLLKEGDFCGEELLTWALDPKSG NLPSSTR
Sbjct: 538 DPVDEMLFIIRGRLESVTTGGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTR 597

Query: 183 TVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS 362
           TVKALTEVEAFAL A+ELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS
Sbjct: 598 TVKALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS 657


>ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|222866563|gb|EEF03694.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score =  236 bits (602), Expect = 1e-60
 Identities = 114/120 (95%), Positives = 116/120 (96%)
 Frame = +3

Query: 3   DPVDEMLFIIRGRLESETTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTR 182
           DPVDEMLFIIRGRLES TTDGGRSGFFNRSLL+EGDFCGEELLTWALDPKSG NLPSSTR
Sbjct: 535 DPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLREGDFCGEELLTWALDPKSGANLPSSTR 594

Query: 183 TVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS 362
           TVKAL EVEAFAL A+ELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS
Sbjct: 595 TVKALREVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYS 654


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