BLASTX nr result

ID: Panax21_contig00005779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005779
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300567.1| predicted protein [Populus trichocarpa] gi|2...   177   9e-43
ref|XP_004158073.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR...   176   3e-42
ref|XP_004135545.1| PREDICTED: probable LRR receptor-like serine...   176   3e-42
ref|XP_003594540.1| hypothetical protein MTR_2g030380 [Medicago ...   175   3e-42
ref|XP_002523183.1| protein binding protein, putative [Ricinus c...   174   1e-41

>ref|XP_002300567.1| predicted protein [Populus trichocarpa] gi|222847825|gb|EEE85372.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score =  177 bits (449), Expect = 9e-43
 Identities = 90/144 (62%), Positives = 110/144 (76%)
 Frame = +3

Query: 3   VSGGEPQVFDNLRVLDLSHNQLSRDLPRFIFVYELQVLKLSNKRFSGFITNDLLKGDSLV 182
           ++GG+ Q+F +++VLDLS+NQLS +LP F F YELQVL+LSN +FSG+I NDLLKGDSL+
Sbjct: 222 LNGGDMQLFASVKVLDLSYNQLSGELPGFDFAYELQVLRLSNNKFSGYIPNDLLKGDSLL 281

Query: 183 LTELDLSGNNLTGPISMIXXXXXXXXXXXXXXXXXXXHLVTRSCAVLDLSNNQFEGNLTK 362
           L ELDLS NNL+GPISMI                    LVT SCAVLDLSNN+FEGNLT+
Sbjct: 282 LNELDLSANNLSGPISMIMSTTLRVLDLSSNVLVGELPLVTGSCAVLDLSNNRFEGNLTR 341

Query: 363 LLKWGNI*ILDLSQNRLTGPIPEV 434
           ++KWG+I  LDLSQN LTGPIPE+
Sbjct: 342 MVKWGDIEYLDLSQNHLTGPIPEI 365



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 52/136 (38%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
 Frame = +3

Query: 36  LRVLDLSHNQLSRDLPRFIFVYELQVLKLSNKRFSGFITNDLLKGDSLVLTELDLSGNNL 215
           LRVLDLS N L  +LP  +      VL LSN RF G +T  +  GD   +  LDLS N+L
Sbjct: 304 LRVLDLSSNVLVGELP--LVTGSCAVLDLSNNRFEGNLTRMVKWGD---IEYLDLSQNHL 358

Query: 216 TGPISMIXXXXXXXXXXXXXXXXXXXHL---VTR--SCAVLDLSNNQFEGN-LTKLLKWG 377
           TGPI  I                    L   +T+     VLDLS+NQ  G+ LT LL   
Sbjct: 359 TGPIPEIAPQFLRLNYLNLSHNSLTSSLPKVITQYPKLRVLDLSSNQLGGSMLTDLLMSP 418

Query: 378 NI*ILDLSQNRLTGPI 425
            +  + L +N L G I
Sbjct: 419 TLQEIHLEKNLLDGSI 434


>ref|XP_004158073.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At4g20940-like [Cucumis
           sativus]
          Length = 1061

 Score =  176 bits (445), Expect = 3e-42
 Identities = 89/144 (61%), Positives = 108/144 (75%)
 Frame = +3

Query: 3   VSGGEPQVFDNLRVLDLSHNQLSRDLPRFIFVYELQVLKLSNKRFSGFITNDLLKGDSLV 182
           V+GGE  +F+NL+ LDLS+NQ S +LP F FVY+LQ+LKLSN RFSG I N+LLKGD+ V
Sbjct: 282 VNGGELSLFENLKTLDLSYNQFSGELPGFSFVYDLQILKLSNNRFSGDIPNNLLKGDASV 341

Query: 183 LTELDLSGNNLTGPISMIXXXXXXXXXXXXXXXXXXXHLVTRSCAVLDLSNNQFEGNLTK 362
           LTELDLS NNL+GP+SMI                    L+T SCAVLDLSNNQF+GNLT+
Sbjct: 342 LTELDLSANNLSGPVSMITSTTLLVLNLSSNQLTGELPLLTGSCAVLDLSNNQFKGNLTR 401

Query: 363 LLKWGNI*ILDLSQNRLTGPIPEV 434
           ++KWGN+  LDLSQN LTGPIPE+
Sbjct: 402 MIKWGNLEFLDLSQNLLTGPIPEL 425


>ref|XP_004135545.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like [Cucumis sativus]
          Length = 1061

 Score =  176 bits (445), Expect = 3e-42
 Identities = 89/144 (61%), Positives = 108/144 (75%)
 Frame = +3

Query: 3   VSGGEPQVFDNLRVLDLSHNQLSRDLPRFIFVYELQVLKLSNKRFSGFITNDLLKGDSLV 182
           V+GGE  +F+NL+ LDLS+NQ S +LP F FVY+LQ+LKLSN RFSG I N+LLKGD+ V
Sbjct: 282 VNGGELSLFENLKTLDLSYNQFSGELPGFSFVYDLQILKLSNNRFSGDIPNNLLKGDASV 341

Query: 183 LTELDLSGNNLTGPISMIXXXXXXXXXXXXXXXXXXXHLVTRSCAVLDLSNNQFEGNLTK 362
           LTELDLS NNL+GP+SMI                    L+T SCAVLDLSNNQF+GNLT+
Sbjct: 342 LTELDLSANNLSGPVSMITSTTLLVLNLSSNQLTGELPLLTGSCAVLDLSNNQFKGNLTR 401

Query: 363 LLKWGNI*ILDLSQNRLTGPIPEV 434
           ++KWGN+  LDLSQN LTGPIPE+
Sbjct: 402 MIKWGNLEFLDLSQNLLTGPIPEL 425


>ref|XP_003594540.1| hypothetical protein MTR_2g030380 [Medicago truncatula]
           gi|355483588|gb|AES64791.1| hypothetical protein
           MTR_2g030380 [Medicago truncatula]
          Length = 1048

 Score =  175 bits (444), Expect = 3e-42
 Identities = 91/144 (63%), Positives = 106/144 (73%)
 Frame = +3

Query: 3   VSGGEPQVFDNLRVLDLSHNQLSRDLPRFIFVYELQVLKLSNKRFSGFITNDLLKGDSLV 182
           V G E  VF +L+VLDLS+NQL+ +LP F FVY+LQ+LKLSN RFSGFI N LLKGDSLV
Sbjct: 265 VGGAEQPVFQDLKVLDLSYNQLNGELPGFDFVYDLQILKLSNNRFSGFIPNGLLKGDSLV 324

Query: 183 LTELDLSGNNLTGPISMIXXXXXXXXXXXXXXXXXXXHLVTRSCAVLDLSNNQFEGNLTK 362
           LTELDLS NNL+GP+SMI                    L+T SCAVLDLSNN+FEGNLT+
Sbjct: 325 LTELDLSANNLSGPLSMITSTTLHFLNLSSNGFTGELPLLTGSCAVLDLSNNKFEGNLTR 384

Query: 363 LLKWGNI*ILDLSQNRLTGPIPEV 434
           +LKWGNI  LDL +NRL G +PEV
Sbjct: 385 MLKWGNIEYLDLGRNRLAGNVPEV 408


>ref|XP_002523183.1| protein binding protein, putative [Ricinus communis]
           gi|223537590|gb|EEF39214.1| protein binding protein,
           putative [Ricinus communis]
          Length = 1060

 Score =  174 bits (440), Expect = 1e-41
 Identities = 90/145 (62%), Positives = 107/145 (73%)
 Frame = +3

Query: 15  EPQVFDNLRVLDLSHNQLSRDLPRFIFVYELQVLKLSNKRFSGFITNDLLKGDSLVLTEL 194
           E ++F +L+VLDLS+NQLS DLP F F YELQVL+LSN RFSGF+ NDLLKGDSL+LTEL
Sbjct: 283 ELRLFASLKVLDLSYNQLSGDLPGFDFAYELQVLRLSNNRFSGFVPNDLLKGDSLLLTEL 342

Query: 195 DLSGNNLTGPISMIXXXXXXXXXXXXXXXXXXXHLVTRSCAVLDLSNNQFEGNLTKLLKW 374
           DLS NNL+GP+SMI                    +VT SCAVLDLSNN+FEGNLT++ KW
Sbjct: 343 DLSTNNLSGPVSMIMSTTLRVLDLSSNGLTGELPIVTGSCAVLDLSNNEFEGNLTRIAKW 402

Query: 375 GNI*ILDLSQNRLTGPIPEVLNLYI 449
           GN+  LDLSQNRL G  PEVL  ++
Sbjct: 403 GNLEYLDLSQNRLKGSFPEVLPQFL 427


Top