BLASTX nr result

ID: Panax21_contig00005764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005764
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281757.2| PREDICTED: two-component response regulator-...   193   2e-47
gb|AFA35965.1| timing of cab expression 1/pseudo-response regula...   176   3e-42
emb|CBI15189.3| unnamed protein product [Vitis vinifera]              173   2e-41
gb|AEK06150.1| timing of cab 1 [Populus balsamifera]                  158   7e-37
gb|AEK06134.1| timing of cab 1 [Populus balsamifera] gi|33977850...   158   7e-37

>ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
           vinifera]
          Length = 556

 Score =  193 bits (491), Expect = 2e-47
 Identities = 105/204 (51%), Positives = 133/204 (65%), Gaps = 8/204 (3%)
 Frame = -2

Query: 590 TYVKSGLLKSNAQVVIPIDENTIEQLRIEKKFNTWSGQVVNDTQQPVVKEARENHSRGDD 411
           TYVKS ++K+N+Q +  I+E+  +  R+E++   WS + VNDTQ+    EA EN+S+GDD
Sbjct: 265 TYVKSSMIKTNSQGIPNINESAPQHSRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDD 324

Query: 410 FQSGNSIPDYFSVDRXXXXXXXXXXXXXS--KVEEFSQVHMYPPNGAPHDFSSFSGH--Y 243
           F S NSIPD  SV+                 K EEFSQV ++P N    D S F GH  Y
Sbjct: 325 FPSSNSIPDSLSVEMSCTPPAPIEFVQGRNSKGEEFSQVPIHPRNEHQVDISGFPGHTAY 384

Query: 242 PYYISGLMNQVMMSTTTS---KSLQHLQNNAP-SALLHQGNHIPHFPPHVPGMAPFPYYP 75
           PY +SG+MNQVMM ++     KSL  +QNNA  SA+L Q NH+P  PPHVPG+A FPYYP
Sbjct: 385 PYCMSGVMNQVMMPSSAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYP 444

Query: 74  VSVCLQSGQMPTTHPWPPYGGSST 3
           VS+CLQ GQM TTHPWP YG SS+
Sbjct: 445 VSICLQPGQMSTTHPWPSYGNSSS 468


>gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
           attenuata]
          Length = 551

 Score =  176 bits (446), Expect = 3e-42
 Identities = 98/200 (49%), Positives = 125/200 (62%), Gaps = 6/200 (3%)
 Frame = -2

Query: 590 TYVKSGLLKSNAQVVIPIDENTIEQLRIEKKFNTWSGQVVNDTQQPVVKEARENHSRGDD 411
           TYVKSG+LK+N Q      EN + QLRIE+K N   G +  +TQ  V ++A ENHS+GDD
Sbjct: 253 TYVKSGVLKTNEQGTTCTHEN-VPQLRIEEKSNAVDGNLEIETQMQVNEDAVENHSQGDD 311

Query: 410 FQSGNSIPDYFSVDRXXXXXXXXXXXXXS--KVEEFSQVHMYPPNGAPHDFSSFSGH--Y 243
           ++S NS P+ +S+ R                K+EEFSQV+M+P N A  D  SF     Y
Sbjct: 312 YRSSNSFPESYSMKRSCTPPLSLELTRQRNSKMEEFSQVYMHPRNEAQRDAVSFHAQTAY 371

Query: 242 PYYISGLMNQVMMSTTT--SKSLQHLQNNAPSALLHQGNHIPHFPPHVPGMAPFPYYPVS 69
            Y++SG MNQVMM +     K+LQ L N+A SA+L Q NH+P  PPH+ GMA FPYYP+ 
Sbjct: 372 SYFVSGAMNQVMMPSPHIYQKNLQDLHNHANSAVLPQYNHMPPCPPHMHGMASFPYYPMG 431

Query: 68  VCLQSGQMPTTHPWPPYGGS 9
           +CLQ GQMPT H WP  G S
Sbjct: 432 LCLQPGQMPTPHQWPTIGNS 451


>emb|CBI15189.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  173 bits (439), Expect = 2e-41
 Identities = 96/202 (47%), Positives = 124/202 (61%), Gaps = 6/202 (2%)
 Frame = -2

Query: 590 TYVKSGLLKSNAQVVIPIDENTIEQLRIEKKFNTWSGQVVNDTQQPVVKEARENHSRGDD 411
           TYVKS ++K+N+Q +  I+E+  +  R+E++   WS + VNDTQ+    EA EN+S+GDD
Sbjct: 260 TYVKSSMIKTNSQGIPNINESAPQHSRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDD 319

Query: 410 FQSGNSIPDYFSVDRXXXXXXXXXXXXXSKVEEFSQVHMYPPNGAPHDFSSFSGH--YPY 237
           F S                            +EFSQV ++P N    D S F GH  YPY
Sbjct: 320 FPS----------------------------KEFSQVPIHPRNEHQVDISGFPGHTAYPY 351

Query: 236 YISGLMNQVMMSTTTS---KSLQHLQNNAP-SALLHQGNHIPHFPPHVPGMAPFPYYPVS 69
            +SG+MNQVMM ++     KSL  +QNNA  SA+L Q NH+P  PPHVPG+A FPYYPVS
Sbjct: 352 CMSGVMNQVMMPSSAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYPVS 411

Query: 68  VCLQSGQMPTTHPWPPYGGSST 3
           +CLQ GQM TTHPWP YG SS+
Sbjct: 412 ICLQPGQMSTTHPWPSYGNSSS 433


>gb|AEK06150.1| timing of cab 1 [Populus balsamifera]
          Length = 557

 Score =  158 bits (399), Expect = 7e-37
 Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
 Frame = -2

Query: 590 TYVKSGLLKSNAQVVIPIDENTIEQLRIEKKFNTWSGQVVNDTQQPVVKEARENHSRGDD 411
           TYVKS  +K+N+Q V  I++NT + LR+E+K      Q++ND       EA E HS+ DD
Sbjct: 294 TYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLNDAHLQENGEALEIHSQVDD 353

Query: 410 FQSGNSIPDYFSVDRXXXXXXXXXXXXXSKVEEFSQVHMYPPNGAPHDFSSFSGH--YPY 237
           F+S +SIPD  S++R             +  ++  +V M+  N    D SS S    YPY
Sbjct: 354 FRSSSSIPDSLSLERSCTPPMSREFPQRNFKDD--RVLMHQTNEPQLDASSLSTQSVYPY 411

Query: 236 YISGLMNQVMMSTTTS---KSLQHLQNNAPSALLHQGNHIPHFPPHVPGMAPFPYYPVSV 66
           ++SG++NQVMMS++     K+L  LQ++  SA+L   NH+P  PPH+ GMA FPYYPVS+
Sbjct: 412 FMSGVVNQVMMSSSAQLYQKNLHELQSHGTSAMLPGYNHLPQCPPHMSGMASFPYYPVSI 471

Query: 65  CLQSGQMPTTHPWPPYGGSST 3
           CLQ GQMPTT  WP +G S++
Sbjct: 472 CLQPGQMPTTPSWPSFGSSTS 492


>gb|AEK06134.1| timing of cab 1 [Populus balsamifera] gi|339778507|gb|AEK06135.1|
           timing of cab 1 [Populus balsamifera]
           gi|339778511|gb|AEK06137.1| timing of cab 1 [Populus
           balsamifera] gi|339778513|gb|AEK06138.1| timing of cab 1
           [Populus balsamifera] gi|339778515|gb|AEK06139.1| timing
           of cab 1 [Populus balsamifera]
           gi|339778523|gb|AEK06143.1| timing of cab 1 [Populus
           balsamifera] gi|339778527|gb|AEK06145.1| timing of cab 1
           [Populus balsamifera] gi|339778531|gb|AEK06147.1| timing
           of cab 1 [Populus balsamifera]
           gi|339778535|gb|AEK06149.1| timing of cab 1 [Populus
           balsamifera] gi|339778539|gb|AEK06151.1| timing of cab 1
           [Populus balsamifera] gi|339778541|gb|AEK06152.1| timing
           of cab 1 [Populus balsamifera]
          Length = 557

 Score =  158 bits (399), Expect = 7e-37
 Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
 Frame = -2

Query: 590 TYVKSGLLKSNAQVVIPIDENTIEQLRIEKKFNTWSGQVVNDTQQPVVKEARENHSRGDD 411
           TYVKS  +K+N+Q V  I++NT + LR+E+K      Q++ND       EA E HS+ DD
Sbjct: 294 TYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLNDAHLQENGEALEIHSQVDD 353

Query: 410 FQSGNSIPDYFSVDRXXXXXXXXXXXXXSKVEEFSQVHMYPPNGAPHDFSSFSGH--YPY 237
           F+S +SIPD  S++R             +  ++  +V M+  N    D SS S    YPY
Sbjct: 354 FRSSSSIPDSLSLERSCTPPMSREFPQRNFKDD--RVLMHQTNEPQLDASSLSTQSVYPY 411

Query: 236 YISGLMNQVMMSTTTS---KSLQHLQNNAPSALLHQGNHIPHFPPHVPGMAPFPYYPVSV 66
           ++SG++NQVMMS++     K+L  LQ++  SA+L   NH+P  PPH+ GMA FPYYPVS+
Sbjct: 412 FMSGVVNQVMMSSSAQLYQKNLHELQSHGTSAMLPGYNHLPQCPPHMSGMASFPYYPVSI 471

Query: 65  CLQSGQMPTTHPWPPYGGSST 3
           CLQ GQMPTT  WP +G S++
Sbjct: 472 CLQPGQMPTTPSWPSFGSSTS 492


Top