BLASTX nr result

ID: Panax21_contig00005748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005748
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311250.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_002520803.1| Biotin carboxyl carrier protein of acetyl-Co...   178   6e-43
ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein o...   177   2e-42
ref|XP_002316186.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-42
gb|ACU19863.1| unknown [Glycine max]                                  169   4e-40

>ref|XP_002311250.1| predicted protein [Populus trichocarpa] gi|222851070|gb|EEE88617.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  182 bits (463), Expect = 3e-44
 Identities = 89/101 (88%), Positives = 97/101 (96%)
 Frame = +1

Query: 13  KSRKLAALEASGASRYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVLGFLDQF 192
           KS KLAALEASGAS YVLVASPTVGSFR+ RT+KGKKQPP CKEGD+IKEGQV+G+LDQF
Sbjct: 158 KSSKLAALEASGASGYVLVASPTVGSFRRNRTVKGKKQPPICKEGDVIKEGQVIGYLDQF 217

Query: 193 GTELPVKSDVAGEVLKLLFDDGEAVGYGDPLVAVLPSFHGI 315
           GTELPVKSDVAGEVLKLLF+DG+AVGYGDPL+AVLPSFHGI
Sbjct: 218 GTELPVKSDVAGEVLKLLFNDGDAVGYGDPLIAVLPSFHGI 258


>ref|XP_002520803.1| Biotin carboxyl carrier protein of acetyl-CoA carboxylase, putative
           [Ricinus communis] gi|223539934|gb|EEF41512.1| Biotin
           carboxyl carrier protein of acetyl-CoA carboxylase,
           putative [Ricinus communis]
          Length = 258

 Score =  178 bits (452), Expect = 6e-43
 Identities = 88/102 (86%), Positives = 97/102 (95%)
 Frame = +1

Query: 13  KSRKLAALEASGASRYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVLGFLDQF 192
           KS KLAALEASGA+ YVLVASPTVGSFR+ R++KGK+QPP  KEGDLIKEGQV+G+LDQF
Sbjct: 157 KSAKLAALEASGATGYVLVASPTVGSFRRNRSVKGKRQPPIFKEGDLIKEGQVIGYLDQF 216

Query: 193 GTELPVKSDVAGEVLKLLFDDGEAVGYGDPLVAVLPSFHGIR 318
           GTELPVKSDVAGEVLKLLFDDG+AVGYGDPLVAVLPSFHGI+
Sbjct: 217 GTELPVKSDVAGEVLKLLFDDGDAVGYGDPLVAVLPSFHGIQ 258


>ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase-like [Vitis vinifera]
           gi|297736542|emb|CBI25413.3| unnamed protein product
           [Vitis vinifera]
          Length = 288

 Score =  177 bits (448), Expect = 2e-42
 Identities = 85/103 (82%), Positives = 96/103 (93%)
 Frame = +1

Query: 7   VEKSRKLAALEASGASRYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVLGFLD 186
           +EK  KL ALEASGA+ YVLV+SPTVGSFR GRTLKGK+QPP CKEGD+IKEGQV+G+LD
Sbjct: 185 LEKPSKLRALEASGANAYVLVSSPTVGSFRTGRTLKGKRQPPVCKEGDVIKEGQVIGYLD 244

Query: 187 QFGTELPVKSDVAGEVLKLLFDDGEAVGYGDPLVAVLPSFHGI 315
           QFG+ELPVKSD AGEVLK++F+DGEAVGYGDPLVAVLPSFHGI
Sbjct: 245 QFGSELPVKSDTAGEVLKVIFNDGEAVGYGDPLVAVLPSFHGI 287


>ref|XP_002316186.1| predicted protein [Populus trichocarpa] gi|222865226|gb|EEF02357.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  176 bits (446), Expect = 3e-42
 Identities = 88/105 (83%), Positives = 95/105 (90%)
 Frame = +1

Query: 1   VPVEKSRKLAALEASGASRYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVLGF 180
           V   KS KLA LEASGAS YVLVASPTVGSFR+ RT+KGKKQP  CKEGD+IKEGQV+G+
Sbjct: 145 VSFRKSSKLAVLEASGASGYVLVASPTVGSFRRNRTVKGKKQPLICKEGDVIKEGQVIGY 204

Query: 181 LDQFGTELPVKSDVAGEVLKLLFDDGEAVGYGDPLVAVLPSFHGI 315
           LDQFGTELPVKSDVAGEVLKLLF+DG+AVGYGDPLVAVLPSFH I
Sbjct: 205 LDQFGTELPVKSDVAGEVLKLLFNDGDAVGYGDPLVAVLPSFHAI 249


>gb|ACU19863.1| unknown [Glycine max]
          Length = 291

 Score =  169 bits (427), Expect = 4e-40
 Identities = 82/106 (77%), Positives = 94/106 (88%)
 Frame = +1

Query: 1   VPVEKSRKLAALEASGASRYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVLGF 180
           V  EKS +LAALEASG + YVLV+SPTVG FR+GRT+KGKKQPP CKEGD+IKEGQV+G+
Sbjct: 186 VSKEKSPRLAALEASGTNTYVLVSSPTVGLFRRGRTVKGKKQPPICKEGDVIKEGQVIGY 245

Query: 181 LDQFGTELPVKSDVAGEVLKLLFDDGEAVGYGDPLVAVLPSFHGIR 318
           LDQFGT LP+KSDVAGEVLKLL +DGE VGYGDPL+AVL SFH I+
Sbjct: 246 LDQFGTGLPIKSDVAGEVLKLLVEDGEPVGYGDPLIAVLSSFHDIK 291


Top