BLASTX nr result

ID: Panax21_contig00005717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005717
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636005.1| Helicase-like protein [Medicago truncatula] ...    91   1e-16
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...    90   2e-16
gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indi...    84   1e-14
gb|ABD65117.1| hypothetical protein 31.t00030 [Brassica oleracea]      82   3e-14
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ...    80   1e-13

>ref|XP_003636005.1| Helicase-like protein [Medicago truncatula]
           gi|355501940|gb|AES83143.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1844

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/63 (60%), Positives = 48/63 (76%)
 Frame = +2

Query: 197 YWDIGDPIWECSSCNALMWYHERISKNQKSKNPEFSMCCAGGKVQLPLLKEPPHILKALL 376
           Y DIGDPIWEC  C ALMWY ER  K++ S  P+F +CC GGKV+LPLL++PP +L+ LL
Sbjct: 438 YSDIGDPIWECQMCGALMWYQERKDKSRHSTVPKFQLCCGGGKVKLPLLEQPPQLLQDLL 497

Query: 377 NGS 385
            G+
Sbjct: 498 FGN 500


>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein
           [Beta vulgaris subsp. vulgaris]
          Length = 2037

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 37/67 (55%), Positives = 46/67 (68%)
 Frame = +2

Query: 194 DYWDIGDPIWECSSCNALMWYHERISKNQKSKNPEFSMCCAGGKVQLPLLKEPPHILKAL 373
           +YWDIGDP + C  C AL WY ERI K++KS  P FS CC  GKVQLP  K+PP +L+ L
Sbjct: 746 EYWDIGDPTYTCEHCGALFWYEERIGKHRKSPKPTFSNCCMNGKVQLPHFKDPPALLQRL 805

Query: 374 LNGSDHR 394
           L+  D +
Sbjct: 806 LSNGDSK 812


>gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indica Group]
          Length = 937

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/106 (37%), Positives = 55/106 (51%)
 Frame = +2

Query: 65  LQTAKHCQHQNQRDCVHPVPNYVNQGKENTPISRENCVHLSDNDYWDIGDPIWECSSCNA 244
           LQ  +  +   Q +        +     +TP      VH   +  W+ G P + C  CNA
Sbjct: 52  LQQLREAKRARQNNSEPSQQTSIQASSSSTP---STIVH---SQIWNFGKPTYICQHCNA 105

Query: 245 LMWYHERISKNQKSKNPEFSMCCAGGKVQLPLLKEPPHILKALLNG 382
           L+WY ER++ N+ + NP F MCC  GK++LP LKEPP  LK LL G
Sbjct: 106 LLWYEERLNSNKSTTNPSFGMCCKQGKIKLPPLKEPPQYLKRLLTG 151


>gb|ABD65117.1| hypothetical protein 31.t00030 [Brassica oleracea]
          Length = 1471

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = +2

Query: 188 DNDYWDIGDPIWECSSCNALMWYHERISKNQKSKNPEFSMCCAGGKVQLPLLKEPPHILK 367
           + DY D GD   +C  C AL WY+ER+SK++ ++ P F+MCC  GKVQLP LKEPP +L+
Sbjct: 86  EEDYKDDGDLTRQCLKCGALFWYNERVSKSRNARTPVFTMCCMRGKVQLPQLKEPPELLR 145

Query: 368 ALLNGSD 388
            LL   D
Sbjct: 146 RLLTNDD 152


>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
           gi|355509000|gb|AES90142.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1651

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/60 (55%), Positives = 41/60 (68%)
 Frame = +2

Query: 197 YWDIGDPIWECSSCNALMWYHERISKNQKSKNPEFSMCCAGGKVQLPLLKEPPHILKALL 376
           Y DIGDP +EC  C A MWY ER  K+++S NPEF MCC  GK+Q+P L  PP +L  L+
Sbjct: 264 YSDIGDPSFECRKCGACMWYQERRRKSRESSNPEFGMCCGNGKIQIPFLPTPPPLLNDLM 323