BLASTX nr result
ID: Panax21_contig00005704
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00005704 (403 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAG80685.1| ribosomal protein L32 [Populus alba] 114 6e-24 ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2... 112 2e-23 ref|XP_002522475.1| conserved hypothetical protein [Ricinus comm... 107 1e-21 ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis] 104 9e-21 >dbj|BAG80685.1| ribosomal protein L32 [Populus alba] Length = 138 Score = 114 bits (286), Expect = 6e-24 Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 5/102 (4%) Frame = -2 Query: 291 EGNTGCSPLVLVRWTHSIVKPSPLDSVFSNTVVSPQFVLPESDRSSDTN----GFGFSCL 124 EGN GC L + +WTH + PLD +++ +PQF LPE D + DT+ FGF+ Sbjct: 13 EGNNGCR-LGIRKWTHVVAMAPPLDGALESSIAAPQFTLPEFDANQDTSKNSSDFGFTFP 71 Query: 123 PFG-GGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCK 1 F GGSMELMAVP++KV+ HKRGIRNGPKALKP+PVIIRCK Sbjct: 72 GFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCK 113 >ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|224112197|ref|XP_002316116.1| predicted protein [Populus trichocarpa] gi|222865152|gb|EEF02283.1| predicted protein [Populus trichocarpa] gi|222865156|gb|EEF02287.1| predicted protein [Populus trichocarpa] Length = 138 Score = 112 bits (281), Expect = 2e-23 Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 5/102 (4%) Frame = -2 Query: 291 EGNTGCSPLVLVRWTHSIVKPSPLDSVFSNTVVSPQFVLPESDRSSDTNG----FGFSCL 124 E N GC L + +WTH + PLD +++ SPQF LPE D + DT+ FGF+ Sbjct: 13 EANNGCR-LGIRKWTHVVAMAPPLDGALESSIASPQFTLPEFDANQDTSNNSSDFGFTFP 71 Query: 123 PFG-GGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCK 1 F GGSMELMAVP++KV+ HKRGIRNGPKALKP PVIIRCK Sbjct: 72 GFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCK 113 >ref|XP_002522475.1| conserved hypothetical protein [Ricinus communis] gi|223538360|gb|EEF39967.1| conserved hypothetical protein [Ricinus communis] Length = 140 Score = 107 bits (267), Expect = 1e-21 Identities = 59/104 (56%), Positives = 67/104 (64%), Gaps = 8/104 (7%) Frame = -2 Query: 288 GNTGCSPLVLVRWTHSIVKPSPLDSVFSNTVVSPQFVLPE------SDRSSDTNGFGFSC 127 GN G + L +RWTH P PLD +N + PQ VLPE + SS N F Sbjct: 13 GNNGYT-LGFLRWTHVAAMPPPLDGSINNAIAPPQMVLPEFNPNHDNSNSSYDNNLEFGF 71 Query: 126 LPFG--GGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCK 1 LP GGSM+LMAVP+KKVSRHKRGIRNGPKALKP PVIIRC+ Sbjct: 72 LPSFSFGGSMDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCR 115 >ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|222851139|gb|EEE88686.1| predicted protein [Populus trichocarpa] Length = 138 Score = 106 bits (264), Expect = 2e-21 Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 6/102 (5%) Frame = -2 Query: 288 GNTGCSPLVLVRWTHSIVKPSPLDSVFSNTVVSPQFVLPESDRSSDTN------GFGFSC 127 GN+GC + RW H PLD + + SPQ LPE D + DT+ GFG Sbjct: 14 GNSGCRSGIR-RWAHVPAMARPLDGALESYIASPQLTLPELDANQDTSSNSSNSGFGLPG 72 Query: 126 LPFGGGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCK 1 FGG SMELMAVP++KV+ HKRGIRNGPKALKP+PVIIRCK Sbjct: 73 FSFGG-SMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCK 113 >gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis] Length = 139 Score = 104 bits (259), Expect = 9e-21 Identities = 57/104 (54%), Positives = 64/104 (61%), Gaps = 8/104 (7%) Frame = -2 Query: 288 GNTGCSPLVLVRWTHSIVKPSPLDSVFSNTVVSPQFVLPESDRSSDTNG--------FGF 133 G GC+ L L+RW H PSPLD T P VLPE D + D FGF Sbjct: 13 GKYGCT-LSLLRWAHIASMPSPLDGSLQRTTAPPDMVLPEFDTNPDNVNSSYRNNLEFGF 71 Query: 132 SCLPFGGGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCK 1 FGG S+E+MAVP+KKVS HKRGIRNGPKALKP PVIIRC+ Sbjct: 72 PSFSFGG-SIEVMAVPKKKVSPHKRGIRNGPKALKPTPVIIRCR 114