BLASTX nr result

ID: Panax21_contig00005686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005686
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremu...   415   e-113
ref|XP_002315043.1| hypothetical protein POPTRDRAFT_659295 [Popu...   414   e-113
ref|XP_002312253.1| hypothetical protein POPTRDRAFT_656451 [Popu...   413   e-113
gb|ACK43223.1| alpha-expansin [Ziziphus jujuba]                       412   e-112
gb|AFZ78600.1| expansin protein [Populus tomentosa]                   410   e-112

>gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremuloides]
          Length = 249

 Score =  415 bits (1066), Expect = e-113
 Identities = 195/248 (78%), Positives = 210/248 (84%)
 Frame = -2

Query: 1419 MSTCGILLVGFLAMASSVNGYSAGGWTNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 1240
            M+  GI LVGFLAM SSV GY  GGW NAHATFY             GYGNLYSQGYGTN
Sbjct: 1    MALAGIFLVGFLAMVSSVYGYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 1239 TAALSTALFNNGLSCGSCYEIKCVNDGRWCLPGSILVTATNFCXXXXXXXXXAGGWCNPP 1060
            TAALSTALFN+GLSCGSC+EI+CVND +WCLPGSI++TATNFC         AGGWCNPP
Sbjct: 61   TAALSTALFNSGLSCGSCFEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGWCNPP 120

Query: 1059 QQHFDLSQPIFQKIAQYKAGIVPVSYRRVPCSRRGGIRFQINGHSYFNLVLITNVGGAGD 880
            Q HFDLSQP+FQ IAQY+AGIVPVSYRRVPC RRGGIRF +NGHSYFNLVLITNVGGAGD
Sbjct: 121  QHHFDLSQPVFQHIAQYRAGIVPVSYRRVPCRRRGGIRFTVNGHSYFNLVLITNVGGAGD 180

Query: 879  VHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQTLSFKVTTSDGHTVVSNNVAPAGWSFG 700
            VHSVSIKGSRTGWQPMSRNWGQNWQSN+YLNGQ+LSFKVTTSDG TVVS NVAP+ WSFG
Sbjct: 181  VHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFG 240

Query: 699  QTYNGAQF 676
            QT++GAQF
Sbjct: 241  QTFSGAQF 248


>ref|XP_002315043.1| hypothetical protein POPTRDRAFT_659295 [Populus trichocarpa]
            gi|118488547|gb|ABK96086.1| unknown [Populus trichocarpa]
            gi|222864083|gb|EEF01214.1| hypothetical protein
            POPTRDRAFT_659295 [Populus trichocarpa]
          Length = 249

 Score =  414 bits (1063), Expect = e-113
 Identities = 195/248 (78%), Positives = 209/248 (84%)
 Frame = -2

Query: 1419 MSTCGILLVGFLAMASSVNGYSAGGWTNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 1240
            M+  GI LVGFLAM SSV GY  GGW NAHATFY             GYGNLYSQGYGTN
Sbjct: 1    MALAGIFLVGFLAMVSSVYGYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 1239 TAALSTALFNNGLSCGSCYEIKCVNDGRWCLPGSILVTATNFCXXXXXXXXXAGGWCNPP 1060
            TAALSTALFN+GLSCGSCYEI+CVND +WCLPGSI++TATNFC         AGGWCNPP
Sbjct: 61   TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGWCNPP 120

Query: 1059 QQHFDLSQPIFQKIAQYKAGIVPVSYRRVPCSRRGGIRFQINGHSYFNLVLITNVGGAGD 880
            Q HFDLSQP+FQ IAQ++AGIVPVSYRRVPC RRGGIRF INGHSYFNLVLITNVGGAGD
Sbjct: 121  QHHFDLSQPVFQHIAQFRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 879  VHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQTLSFKVTTSDGHTVVSNNVAPAGWSFG 700
            VHSVSIKGSRTGWQPMSRNWGQNWQSN+YLNGQ+LSFKVTTSDG TVVS N AP+ WSFG
Sbjct: 181  VHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFG 240

Query: 699  QTYNGAQF 676
            QT++GAQF
Sbjct: 241  QTFSGAQF 248


>ref|XP_002312253.1| hypothetical protein POPTRDRAFT_656451 [Populus trichocarpa]
            gi|222852073|gb|EEE89620.1| hypothetical protein
            POPTRDRAFT_656451 [Populus trichocarpa]
          Length = 251

 Score =  413 bits (1062), Expect = e-113
 Identities = 194/250 (77%), Positives = 209/250 (83%)
 Frame = -2

Query: 1425 MKMSTCGILLVGFLAMASSVNGYSAGGWTNAHATFYXXXXXXXXXXXXXGYGNLYSQGYG 1246
            MKM+  G +LVG LAM SSVNGY  GGW NA ATFY             GYGNLYSQGYG
Sbjct: 1    MKMALAGFILVGLLAMVSSVNGYGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYG 60

Query: 1245 TNTAALSTALFNNGLSCGSCYEIKCVNDGRWCLPGSILVTATNFCXXXXXXXXXAGGWCN 1066
            TNTAALSTALFN+GLSCGSCYEI+CVND +WCLPGSILVTATNFC         AGGWCN
Sbjct: 61   TNTAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSILVTATNFCPPNNALPNNAGGWCN 120

Query: 1065 PPQQHFDLSQPIFQKIAQYKAGIVPVSYRRVPCSRRGGIRFQINGHSYFNLVLITNVGGA 886
            PPQ HFDLSQP+FQ IA+Y AG+VPVSYRRVPC RRGGIRF INGHSYFNLVLITNVGGA
Sbjct: 121  PPQHHFDLSQPVFQHIARYSAGVVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGA 180

Query: 885  GDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQTLSFKVTTSDGHTVVSNNVAPAGWS 706
            GDVH+VS+KGSRTGWQPMSRNWGQNWQSN+YLNGQ+LSFKVTTSDG TVVS N AP+ WS
Sbjct: 181  GDVHAVSVKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWS 240

Query: 705  FGQTYNGAQF 676
            FGQT++GAQF
Sbjct: 241  FGQTFSGAQF 250


>gb|ACK43223.1| alpha-expansin [Ziziphus jujuba]
          Length = 250

 Score =  412 bits (1059), Expect = e-112
 Identities = 198/250 (79%), Positives = 209/250 (83%)
 Frame = -2

Query: 1425 MKMSTCGILLVGFLAMASSVNGYSAGGWTNAHATFYXXXXXXXXXXXXXGYGNLYSQGYG 1246
            MKM+  G  LVGFL M SSV GY  GGW NAHATFY             GYGNLYSQGYG
Sbjct: 1    MKMALAGFFLVGFLGMFSSVCGYG-GGWINAHATFYGGGDASGTMGGACGYGNLYSQGYG 59

Query: 1245 TNTAALSTALFNNGLSCGSCYEIKCVNDGRWCLPGSILVTATNFCXXXXXXXXXAGGWCN 1066
            TNTAALSTALFNNGL CGSCYEI+CVND +WCLPGSI+VTATNFC         AGGWCN
Sbjct: 60   TNTAALSTALFNNGLGCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCN 119

Query: 1065 PPQQHFDLSQPIFQKIAQYKAGIVPVSYRRVPCSRRGGIRFQINGHSYFNLVLITNVGGA 886
            PPQ HFDLSQP+FQ IAQYKAGIVPVSYRRVPC RRGGIRF INGHSYFNLVLITNVGGA
Sbjct: 120  PPQHHFDLSQPVFQHIAQYKAGIVPVSYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGA 179

Query: 885  GDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQTLSFKVTTSDGHTVVSNNVAPAGWS 706
            GDVH+V+IKGSRT WQ MSRNWGQNWQSN+YLNGQ+LSFKVTTSDG +VVSNNVAPAGWS
Sbjct: 180  GDVHAVAIKGSRTRWQAMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRSVVSNNVAPAGWS 239

Query: 705  FGQTYNGAQF 676
            FGQTY+GAQF
Sbjct: 240  FGQTYSGAQF 249


>gb|AFZ78600.1| expansin protein [Populus tomentosa]
          Length = 249

 Score =  410 bits (1053), Expect = e-112
 Identities = 194/248 (78%), Positives = 206/248 (83%)
 Frame = -2

Query: 1419 MSTCGILLVGFLAMASSVNGYSAGGWTNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 1240
            M   G  LVG LAM SSVNGY  GGW NA ATFY             GYGNLYSQGYGTN
Sbjct: 1    MVLAGFFLVGLLAMVSSVNGYGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 1239 TAALSTALFNNGLSCGSCYEIKCVNDGRWCLPGSILVTATNFCXXXXXXXXXAGGWCNPP 1060
            TAALSTALFN+GLSCGSCYEI+CVND +WCLPGSILVTATNFC         AGGWCNPP
Sbjct: 61   TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSILVTATNFCPPNNALPNNAGGWCNPP 120

Query: 1059 QQHFDLSQPIFQKIAQYKAGIVPVSYRRVPCSRRGGIRFQINGHSYFNLVLITNVGGAGD 880
            QQHFDLSQP+FQ IA+Y AGIVPVSYRRVPC RRGGIRF INGHSYFNLVLITNVGGAGD
Sbjct: 121  QQHFDLSQPVFQHIARYSAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 879  VHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQTLSFKVTTSDGHTVVSNNVAPAGWSFG 700
            VH+VS+KGSRTGWQPMSRNWGQNWQSN+YLNGQ+LSFKVTTSDG TVVS N AP+ WSFG
Sbjct: 181  VHAVSVKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFG 240

Query: 699  QTYNGAQF 676
            QT++GAQF
Sbjct: 241  QTFSGAQF 248


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