BLASTX nr result

ID: Panax21_contig00005662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005662
         (1548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l...   601   e-169
ref|XP_004156430.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik...   598   e-168
ref|XP_004139195.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik...   598   e-168
ref|XP_002322045.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166
ref|XP_004157698.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   588   e-165

>ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Vitis vinifera]
          Length = 537

 Score =  601 bits (1549), Expect = e-169
 Identities = 299/381 (78%), Positives = 320/381 (83%), Gaps = 1/381 (0%)
 Frame = +3

Query: 273  MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 452
            MATASVAFKSREDHRKQ+ELEEARKAGLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQLELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 453  SLKHQRKWKQDPNYTRAWYDRGAIIGQADKYRKGACENCGAMTHNAKSCLERPRKLGAKW 632
            SLKHQRKWK DPNYT+AWYDRGA I QADKYRKGACENCGAMTHNAK+C+ERPR+ GAKW
Sbjct: 61   SLKHQRKWKSDPNYTKAWYDRGAKIFQADKYRKGACENCGAMTHNAKTCMERPRQKGAKW 120

Query: 633  TSKNIAPDEKIESFELDYDGKRDRYNGYEAASYTHVIERYEARDEARRKY-XXXXXXXXX 809
            TS +IAPDEKIE+FELDYDGKRDR+NGY+AA+Y  VIERYEARDEARRKY          
Sbjct: 121  TSMHIAPDEKIETFELDYDGKRDRWNGYDAATYARVIERYEARDEARRKYLKEQQLKKLE 180

Query: 810  XXXXXXXXXXXXXXXXXXXXXXXXXXXAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLR 989
                                       AKVDESKQMDFAKVEKRVR         VRNLR
Sbjct: 181  EKNNKQNGEEEVSDEEEDDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLR 240

Query: 990  IREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLN 1169
            IREDTAKYLLNLDVNSAHYDPKTRSMREDPLPD DPNEKFY GDNQ RVSGQALEFKQLN
Sbjct: 241  IREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYGGDNQYRVSGQALEFKQLN 300

Query: 1170 IHAWEAFEKGNDVHMQAAPSQAELLYKSFKVNKEKLKSEVKETIMEKYGNAATEEPLPKE 1349
            IHAWEAF+KG D+HMQAAPSQAELL+K++KV KEKLKS +K+TIM+KYGNAA EE LP+E
Sbjct: 301  IHAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSRMKDTIMDKYGNAAAEEELPRE 360

Query: 1350 LLLGQSEREVEYDRAGRIIKG 1412
            LLLGQSER+VEYDRAGRIIKG
Sbjct: 361  LLLGQSERQVEYDRAGRIIKG 381


>ref|XP_004156430.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Cucumis sativus]
          Length = 536

 Score =  598 bits (1541), Expect = e-168
 Identities = 292/380 (76%), Positives = 319/380 (83%)
 Frame = +3

Query: 273  MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 452
            MATASVAFKSREDHRKQ+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 453  SLKHQRKWKQDPNYTRAWYDRGAIIGQADKYRKGACENCGAMTHNAKSCLERPRKLGAKW 632
            SLKHQRKWK DPNYT++WYDRGA I QADKYRKGACENCGAMTH++KSC+ERPRK+GAKW
Sbjct: 61   SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGAMTHDSKSCMERPRKVGAKW 120

Query: 633  TSKNIAPDEKIESFELDYDGKRDRYNGYEAASYTHVIERYEARDEARRKYXXXXXXXXXX 812
            T+ +IAPDEKIE+FELDYDGKRDR+NGY+ A+Y  VIERYEARDEARRK+          
Sbjct: 121  TNMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERYEARDEARRKFLKEQQLKKLE 180

Query: 813  XXXXXXXXXXXXXXXXXXXXXXXXXXAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLRI 992
                                      AKVDESKQMDFAKVEKRVR         VRNLRI
Sbjct: 181  EKNTKQNEDDEVSAEDEDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI 240

Query: 993  REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI 1172
            REDTAKYLLNLDVNSA+YDPKTRSMREDPLPD+DPNEKFY GDNQ R+SGQAL+FKQLN+
Sbjct: 241  REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDVDPNEKFYEGDNQYRISGQALDFKQLNV 300

Query: 1173 HAWEAFEKGNDVHMQAAPSQAELLYKSFKVNKEKLKSEVKETIMEKYGNAATEEPLPKEL 1352
            HAWEAF+KG D+HMQAAPSQAELLYK++KV KEKLKS  K+ IMEKYGNAA EE LP+EL
Sbjct: 301  HAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSHTKDAIMEKYGNAADEEQLPREL 360

Query: 1353 LLGQSEREVEYDRAGRIIKG 1412
            LLGQSER+VEYDRAGRI+KG
Sbjct: 361  LLGQSERQVEYDRAGRIVKG 380


>ref|XP_004139195.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Cucumis sativus]
          Length = 536

 Score =  598 bits (1541), Expect = e-168
 Identities = 292/380 (76%), Positives = 319/380 (83%)
 Frame = +3

Query: 273  MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 452
            MATASVAFKSREDHRKQ+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 453  SLKHQRKWKQDPNYTRAWYDRGAIIGQADKYRKGACENCGAMTHNAKSCLERPRKLGAKW 632
            SLKHQRKWK DPNYT++WYDRGA I QADKYRKGACENCGAMTH+AK+C+ERPRK+GAKW
Sbjct: 61   SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGAMTHDAKACMERPRKVGAKW 120

Query: 633  TSKNIAPDEKIESFELDYDGKRDRYNGYEAASYTHVIERYEARDEARRKYXXXXXXXXXX 812
            T+ +IAPDEKIE+FELDYDGKRDR+NGY+ A+Y  VIERYEARDEARRK+          
Sbjct: 121  TNMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERYEARDEARRKFLKEQQLKKLE 180

Query: 813  XXXXXXXXXXXXXXXXXXXXXXXXXXAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLRI 992
                                      AKVDESKQMDFAKVEKRVR         VRNLRI
Sbjct: 181  EKNTKQNEDDEVSAEDEDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI 240

Query: 993  REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI 1172
            REDTAKYLLNLDVNSA+YDPKTRSMREDPLPD+DPNEKFY GDNQ R+SGQAL+FKQLN+
Sbjct: 241  REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDVDPNEKFYEGDNQYRISGQALDFKQLNV 300

Query: 1173 HAWEAFEKGNDVHMQAAPSQAELLYKSFKVNKEKLKSEVKETIMEKYGNAATEEPLPKEL 1352
            HAWEAF+KG D+HMQAAPSQAELLYK++KV KEKLKS  K+ IMEKYGNAA EE LP+EL
Sbjct: 301  HAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSHTKDAIMEKYGNAADEEQLPREL 360

Query: 1353 LLGQSEREVEYDRAGRIIKG 1412
            LLGQSER+VEYDRAGRI+KG
Sbjct: 361  LLGQSERQVEYDRAGRIVKG 380


>ref|XP_002322045.1| predicted protein [Populus trichocarpa] gi|222869041|gb|EEF06172.1|
            predicted protein [Populus trichocarpa]
          Length = 536

 Score =  589 bits (1519), Expect = e-166
 Identities = 291/380 (76%), Positives = 315/380 (82%)
 Frame = +3

Query: 273  MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 452
            MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAE+P
Sbjct: 1    MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKP 60

Query: 453  SLKHQRKWKQDPNYTRAWYDRGAIIGQADKYRKGACENCGAMTHNAKSCLERPRKLGAKW 632
            SLKHQRKWK DPNYT++WYDRGA + QA+KYRKGAC NCGAMTH AKSC+ERPRK+GAKW
Sbjct: 61   SLKHQRKWKSDPNYTKSWYDRGAKVFQAEKYRKGACLNCGAMTHAAKSCVERPRKVGAKW 120

Query: 633  TSKNIAPDEKIESFELDYDGKRDRYNGYEAASYTHVIERYEARDEARRKYXXXXXXXXXX 812
            T+ +IAPDEKIE+ ELDYDGKRDR+NGY+ +SY+HV+ERYEARD ARRKY          
Sbjct: 121  TNIHIAPDEKIETIELDYDGKRDRWNGYDPSSYSHVVERYEARDAARRKYVKEQQLKKLE 180

Query: 813  XXXXXXXXXXXXXXXXXXXXXXXXXXAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLRI 992
                                      AKVDESKQMDFAKVEKRVR         VRNLRI
Sbjct: 181  EKNGNQNAEDGVNDVDNDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI 240

Query: 993  REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI 1172
            REDTAKYLLNLDVNSAHYDPKTRSMREDPLPD DPNEKFY GDNQ R SGQALEFK LNI
Sbjct: 241  REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYEGDNQYRNSGQALEFKHLNI 300

Query: 1173 HAWEAFEKGNDVHMQAAPSQAELLYKSFKVNKEKLKSEVKETIMEKYGNAATEEPLPKEL 1352
            HAWEAF+KG D+HMQAAPSQAELLYK+ KV KEKLK+  K+TIMEKYGNAA+EE +P+EL
Sbjct: 301  HAWEAFDKGQDIHMQAAPSQAELLYKNHKVIKEKLKTRTKDTIMEKYGNAASEEEIPREL 360

Query: 1353 LLGQSEREVEYDRAGRIIKG 1412
            LLGQSER+VEYDRAGRIIKG
Sbjct: 361  LLGQSERQVEYDRAGRIIKG 380


>ref|XP_004157698.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SLU7-like
            [Cucumis sativus]
          Length = 539

 Score =  588 bits (1515), Expect = e-165
 Identities = 289/384 (75%), Positives = 316/384 (82%), Gaps = 4/384 (1%)
 Frame = +3

Query: 273  MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 452
            MATASVAFKSREDHRKQ+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 453  SLKHQRKWKQDPNYTRAWYDRGAIIGQADKYRKGACENCGAMTHNAKSCLERPRKLGAKW 632
            SLKHQ  WK DPNYT++WYDRGA I QADKYRKGACENCGAMTH+AK+C+ERPRK+GAKW
Sbjct: 61   SLKHQEXWKSDPNYTKSWYDRGAKIXQADKYRKGACENCGAMTHDAKACMERPRKVGAKW 120

Query: 633  TSKNIAPDEKIESFELDYDGKRDRYNGYEAASYTHVIERYEARDEARRKY----XXXXXX 800
            T+ +IAPDEKIE+FELDYDGKRDR+NGY+ A+Y  VIERYEARDEARRK+          
Sbjct: 121  TNMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERYEARDEARRKFLKEQQLKKLE 180

Query: 801  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVDESKQMDFAKVEKRVRXXXXXXXXXVR 980
                                          AKVDESKQMDFAKVEKRVR         VR
Sbjct: 181  EKNNKQTEDDEVSDEDEDEDEDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVR 240

Query: 981  NLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFK 1160
            NLRIREDTAKYLLNLDVNSA+YDPKTRSMREDPLPD DPNEKFY GDNQNR+SGQAL+FK
Sbjct: 241  NLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQNRISGQALDFK 300

Query: 1161 QLNIHAWEAFEKGNDVHMQAAPSQAELLYKSFKVNKEKLKSEVKETIMEKYGNAATEEPL 1340
            QLN+HAWEAF+KG D+H+QAAPSQAELLYK++ V KEKLKS  K+ IMEKYGNAA EE L
Sbjct: 301  QLNVHAWEAFDKGQDIHLQAAPSQAELLYKNYTVIKEKLKSHTKDAIMEKYGNAAAEEKL 360

Query: 1341 PKELLLGQSEREVEYDRAGRIIKG 1412
            P+ELLLGQSER+VEYDRAGRI+KG
Sbjct: 361  PRELLLGQSERQVEYDRAGRIVKG 384


Top