BLASTX nr result

ID: Panax21_contig00005647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005647
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273184.2| PREDICTED: transcription factor ILR3-like [V...   296   5e-78
ref|XP_002316706.1| predicted protein [Populus trichocarpa] gi|2...   279   6e-73
ref|XP_002518568.1| DNA binding protein, putative [Ricinus commu...   278   1e-72
ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [V...   275   9e-72
ref|XP_002282727.1| PREDICTED: transcription factor ILR3 [Vitis ...   267   2e-69

>ref|XP_002273184.2| PREDICTED: transcription factor ILR3-like [Vitis vinifera]
          Length = 232

 Score =  296 bits (757), Expect = 5e-78
 Identities = 150/237 (63%), Positives = 175/237 (73%), Gaps = 2/237 (0%)
 Frame = +3

Query: 117 MVSPENNSNWVFDYGLLDDIPVPGGDLPPLEPGFQWPTNAFPASTGPSAEFVDPFVTSDG 296
           MVSPE + NW+FDYGL+DD+PVP      L+  F WP++ F AS     EF D  V  D 
Sbjct: 1   MVSPEEDPNWIFDYGLIDDVPVPS-----LQATFNWPSHDFTASAALGVEFDDSPVNLDD 55

Query: 297 IKEYGSRKRIKSGSCSASDSKACREKMRRDRLNDRFQELSSILEPGRPPKMDKAVILSDA 476
           +KE  SRKR++SG CSAS SKACREK+RRDRLNDRF EL SILEPGRPPKMDKAVILSDA
Sbjct: 56  VKENHSRKRMRSGLCSASGSKACREKVRRDRLNDRFLELGSILEPGRPPKMDKAVILSDA 115

Query: 477 VRMVNQLRDEAKKLKESHEVLQDKINELKAEKNELRDXXXXXXXXXXXXXHQMKTVHTQS 656
           +RM+ QLR E +KLK+S E LQ+KINELKAEKNELRD              Q+K + +Q+
Sbjct: 116 LRMMTQLRSEGQKLKKSCEDLQEKINELKAEKNELRDEKQRLKTEKENIVQQIKALSSQA 175

Query: 657 GFL--PSAVPAPFAGPGQVFGGKMVPFMGYPGVPMWQFTPPATVDTTQDHVFHSPVA 821
           GFL  PSA+PAPFA PGQV G K++PF+GYPGV MWQF PPA VDT+QDHV   PVA
Sbjct: 176 GFLPHPSAIPAPFAAPGQVVGSKLMPFIGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 232


>ref|XP_002316706.1| predicted protein [Populus trichocarpa] gi|222859771|gb|EEE97318.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  279 bits (713), Expect = 6e-73
 Identities = 143/243 (58%), Positives = 172/243 (70%), Gaps = 8/243 (3%)
 Frame = +3

Query: 117 MVSPENNSNWVFDYGLLDDIPVPGGDLPPLEP------GFQWPTNAFPASTGPSAEFVDP 278
           MVSP  N NWVFD GL++DI VPGGDL  LE       G  W ++ F  S   S EF + 
Sbjct: 1   MVSPNENDNWVFDCGLIEDISVPGGDLLGLESLDETPNGSLWSSHNFTDSAFLSVEFNNS 60

Query: 279 FVTSDGIKEYGSRKRIKSGSCSASDSKACREKMRRDRLNDRFQELSSILEPGRPPKMDKA 458
           +  SDG KE GSRKR++ GS +A+ SKACREKMRRDRLNDRF EL ++L+PGRPPK+DK+
Sbjct: 61  YENSDGHKESGSRKRVRPGSSNATGSKACREKMRRDRLNDRFTELGALLDPGRPPKVDKS 120

Query: 459 VILSDAVRMVNQLRDEAKKLKESHEVLQDKINELKAEKNELRDXXXXXXXXXXXXXHQMK 638
            IL DA RMV QLRDE++KLKES+  LQ+KI+ELKAEKNELRD              Q+K
Sbjct: 121 AILVDAARMVTQLRDESQKLKESNVSLQEKIDELKAEKNELRDEKQRLKTEKENLERQVK 180

Query: 639 TVHTQSGFL--PSAVPAPFAGPGQVFGGKMVPFMGYPGVPMWQFTPPATVDTTQDHVFHS 812
            + T   FL  PSA+PAPF+ PGQV G K++PF+GYPG+ MWQF PPA VDT+QDHV   
Sbjct: 181 ALSTPPNFLPHPSAIPAPFSAPGQVVGSKLMPFVGYPGISMWQFMPPAVVDTSQDHVLRP 240

Query: 813 PVA 821
           PVA
Sbjct: 241 PVA 243


>ref|XP_002518568.1| DNA binding protein, putative [Ricinus communis]
           gi|223542413|gb|EEF43955.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 229

 Score =  278 bits (711), Expect = 1e-72
 Identities = 138/237 (58%), Positives = 171/237 (72%), Gaps = 2/237 (0%)
 Frame = +3

Query: 117 MVSPENNSNWVFDYGLLDDIPVPGGDLPPLEPGFQWPTNAFPASTGPSAEFVDPFVTSDG 296
           MVSP +N+NW FDYGL++DIPVPGGDLP L+P +  P+         S EF D   +S  
Sbjct: 1   MVSPSDNANWAFDYGLIEDIPVPGGDLPSLDPLWSSPSL--------SVEFDDSLGSSQC 52

Query: 297 IKEYGSRKRIKSGSCSASDSKACREKMRRDRLNDRFQELSSILEPGRPPKMDKAVILSDA 476
           +++ GSRKR++ GSCS   SKACREKMRRD+LNDRF EL ++L+PGRPPKMDK+VIL+DA
Sbjct: 53  LRDNGSRKRVRPGSCSGLGSKACREKMRRDKLNDRFMELGALLDPGRPPKMDKSVILADA 112

Query: 477 VRMVNQLRDEAKKLKESHEVLQDKINELKAEKNELRDXXXXXXXXXXXXXHQMKTVHTQS 656
           ++MVNQLR EA+KLKES+E LQ+K+NELK EKNELRD              Q+  +   +
Sbjct: 113 MKMVNQLRAEAQKLKESNENLQEKVNELKVEKNELRDEKQRLKTEKESIERQVNALSASA 172

Query: 657 GFLP--SAVPAPFAGPGQVFGGKMVPFMGYPGVPMWQFTPPATVDTTQDHVFHSPVA 821
            FLP   A+PAPF+ P QV G K+VP +GYPGVPMWQ  PPATVDT+QD V  SP A
Sbjct: 173 RFLPHLPAIPAPFSSPSQVIGSKLVPIVGYPGVPMWQLMPPATVDTSQDPVLRSPAA 229


>ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [Vitis vinifera]
          Length = 240

 Score =  275 bits (703), Expect = 9e-72
 Identities = 141/233 (60%), Positives = 165/233 (70%), Gaps = 4/233 (1%)
 Frame = +3

Query: 135 NSNWVFDYGLLDDIPVPGGDLPPLEPG--FQWPTNAFPASTGPSAEFVDPFVTSDGIKEY 308
           NSNW+FDYGL++DI VPGG+ P   PG  F WP+ A  +S+  S E    F  SDG+KE 
Sbjct: 8   NSNWLFDYGLMEDITVPGGEFPEPTPGTGFSWPSQALKSSSSVSLEADCSFGDSDGLKEL 67

Query: 309 GSRKRIKSGSCSASDSKACREKMRRDRLNDRFQELSSILEPGRPPKMDKAVILSDAVRMV 488
           G RKR+K  SC A+ +KACREK+RRDRLN+RF EL SILEPGRPPK DKA ILSDAVRMV
Sbjct: 68  GPRKRLKHESCGATGTKACREKLRRDRLNERFLELGSILEPGRPPKTDKAAILSDAVRMV 127

Query: 489 NQLRDEAKKLKESHEVLQDKINELKAEKNELRDXXXXXXXXXXXXXHQMKTVHTQSGFL- 665
            QLR EA+KLKES+  LQ+KI ELKAEKNELRD              Q+K +  Q GFL 
Sbjct: 128 TQLRSEAQKLKESNGDLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQVKAISAQPGFLP 187

Query: 666 -PSAVPAPFAGPGQVFGGKMVPFMGYPGVPMWQFTPPATVDTTQDHVFHSPVA 821
            PSA+PA FA  G+  G K++PF+GYP V MWQF PPA VDT+QDHV   PVA
Sbjct: 188 HPSAMPAAFAAQGRAPGNKLMPFIGYPSVAMWQFMPPAAVDTSQDHVLRPPVA 240


>ref|XP_002282727.1| PREDICTED: transcription factor ILR3 [Vitis vinifera]
           gi|302143204|emb|CBI20499.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score =  267 bits (683), Expect = 2e-69
 Identities = 138/238 (57%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
 Frame = +3

Query: 117 MVSPENNSNWVFDYGLLDDIPVPGGDLPPLEPGFQW-PTNAFPASTGPSAEFVDPFVTSD 293
           MVSPE  +NW+++YGL++DIPVP  +      GF W P  A   S   S E    F  SD
Sbjct: 1   MVSPEA-TNWLYEYGLIEDIPVPDSNFANTNSGFAWTPVQALNTSANVSGEIDGSFGDSD 59

Query: 294 GIKEYGSRKRIKSGSCSASDSKACREKMRRDRLNDRFQELSSILEPGRPPKMDKAVILSD 473
           GIKE GS+KR++S SC AS SKACREK+RRDRLND+F EL SILEPGRPPK DK+ IL D
Sbjct: 60  GIKETGSKKRVRSESCGASSSKACREKLRRDRLNDKFMELGSILEPGRPPKTDKSSILID 119

Query: 474 AVRMVNQLRDEAKKLKESHEVLQDKINELKAEKNELRDXXXXXXXXXXXXXHQMKTVHTQ 653
           AVRMV QLR E++KLK+S+  LQ+KI ELKAEKNELRD              Q+K ++ Q
Sbjct: 120 AVRMVTQLRGESQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKAMNAQ 179

Query: 654 SGFLP--SAVPAPFAGPGQVFGGKMVPFMGYPGVPMWQFTPPATVDTTQDHVFHSPVA 821
             FLP   ++PA FA  GQ  G K+VPF+GYPGV MWQF PPA VDT+QDHV   PVA
Sbjct: 180 PSFLPPVPSIPAAFAAQGQAGGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 237


Top