BLASTX nr result

ID: Panax21_contig00005571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005571
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152174.1| PREDICTED: DCN1-like protein 4-like [Cucumis...    67   2e-09
ref|XP_002527318.1| Defective in cullin neddylation protein, put...    64   1e-08
ref|XP_002303837.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_003549694.1| PREDICTED: DCN1-like protein 5-like [Glycine...    60   1e-07
gb|AFK41487.1| unknown [Lotus japonicus]                               60   2e-07

>ref|XP_004152174.1| PREDICTED: DCN1-like protein 4-like [Cucumis sativus]
           gi|449527597|ref|XP_004170796.1| PREDICTED: DCN1-like
           protein 4-like [Cucumis sativus]
          Length = 230

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/60 (58%), Positives = 42/60 (70%)
 Frame = +3

Query: 327 MPRACKRKADPPNSTPAKSAWVDSARSASKKAVTKEVERIDNLFNSYANKSLDMIDPEGI 506
           M R+  RK   PNST   S+ VD  RSAS +A +KE+ERID+LF SYAN S  +IDPEGI
Sbjct: 1   MRRSATRKTGQPNSTSVNSSAVDLFRSASSRASSKELERIDSLFYSYANPSSGLIDPEGI 60


>ref|XP_002527318.1| Defective in cullin neddylation protein, putative [Ricinus
           communis] gi|223533318|gb|EEF35070.1| Defective in
           cullin neddylation protein, putative [Ricinus communis]
          Length = 231

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/61 (59%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +3

Query: 327 MPRACKRKADPPNST-PAKSAWVDSARSASKKAVTKEVERIDNLFNSYANKSLDMIDPEG 503
           M R+  RK    NST P  S+ VD  RSAS KA +KE+ERID+LF SYAN+S  +IDPEG
Sbjct: 1   MRRSATRKTGQSNSTAPITSSAVDLFRSASSKASSKEMERIDSLFYSYANRSSSLIDPEG 60

Query: 504 I 506
           I
Sbjct: 61  I 61


>ref|XP_002303837.1| predicted protein [Populus trichocarpa] gi|222841269|gb|EEE78816.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = +3

Query: 327 MPRACKRKADPPNSTPAK--SAWVDSARSASKKAVTKEVERIDNLFNSYANKSLDMIDPE 500
           M R+  +K    NST A   S+  D  RS+S KA +KE+ERIDNLF SYAN+S  MIDPE
Sbjct: 1   MRRSASKKTGQSNSTTASITSSATDLFRSSSSKASSKEMERIDNLFYSYANRSSGMIDPE 60

Query: 501 GI 506
           GI
Sbjct: 61  GI 62


>ref|XP_003549694.1| PREDICTED: DCN1-like protein 5-like [Glycine max]
          Length = 228

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = +3

Query: 327 MPRACKRKADPPNSTPAKSAWVDSA-RSASKKAVTKEVERIDNLFNSYANKSLDMIDPEG 503
           MPR  KRKA PP +    S+ VDS+ R+  KK+ TK+ +RIDNLF SYANKSL +IDP+G
Sbjct: 1   MPRP-KRKAAPPIT----SSDVDSSLRTEPKKSTTKQFDRIDNLFESYANKSLGLIDPDG 55

Query: 504 I 506
           I
Sbjct: 56  I 56


>gb|AFK41487.1| unknown [Lotus japonicus]
          Length = 231

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = +3

Query: 327 MPRACKRKADPPNSTPA-KSAWVDSARSASKKAVTKEVERIDNLFNSYANKSLDMIDPEG 503
           M R+  +K    NSTP+  S+  D  RSAS KA +KE ERID+LF SYAN S  +IDPEG
Sbjct: 1   MRRSAAKKTGQSNSTPSVNSSAADLFRSASSKASSKESERIDSLFYSYANGSSSLIDPEG 60

Query: 504 I 506
           I
Sbjct: 61  I 61


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