BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005557
         (2134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-li...   623   e-176
ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Rici...   605   e-170
ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) syntha...   597   e-168
ref|XP_002865017.1| nitrogen regulation family protein [Arabidop...   569   e-160
ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis tha...   567   e-159

>ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-like [Vitis vinifera]
          Length = 424

 Score =  623 bits (1606), Expect = e-176
 Identities = 306/389 (78%), Positives = 341/389 (87%), Gaps = 5/389 (1%)
 Frame = -1

Query: 1444 NDQLCSETAQFPIENYEEEQSCYLGSPGISPIAIPNGHLSGESRIERAWAHWKKLGEPKL 1265
            +D +CSE         +E Q C   S        P+  L+GESRIERAWAHWKKLG+PKL
Sbjct: 48   DDHICSEQ--------QEHQECQSSSADW-----PSRCLTGESRIERAWAHWKKLGQPKL 94

Query: 1264 IVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSQEFTTCKEDRPLFVQFC 1085
            IVAPMVDNSELPFR+LCRKYGA+AAYTPMLHSRIF+ENEKYRSQEFTTCKEDRPLFVQFC
Sbjct: 95   IVAPMVDNSELPFRMLCRKYGAQAAYTPMLHSRIFSENEKYRSQEFTTCKEDRPLFVQFC 154

Query: 1084 ANDPDTLLEAAQRVAPYCDYVDINLGCPQRIARRGNYGAFLMNNLPLVKSLVEKLALNLS 905
            ANDPDTLLEAAQRV PYCDYVDINLGCPQRIARRGNYGAFLM+NLPLVKSLVEKLALNL 
Sbjct: 155  ANDPDTLLEAAQRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLH 214

Query: 904  VPVSCKIRVFPDLHDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKRIRANWNAIRAVKNAI 725
            VPVSCKIRVFP+L DT+NYA+MLEDAGCSLLAVHGRTRDEKDGK+ RA+WNAI+AVKNA+
Sbjct: 215  VPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAV 274

Query: 724  RIPVLANGNVRHVDDVHSCLEETGADGVLSAESLLENPALFAGFRTAE-----EYSNEDG 560
             IPVLANG++RH+DDV  CLEETGADGVLSAESLLENPALFAGF+TAE     E  N+DG
Sbjct: 275  SIPVLANGDIRHMDDVQRCLEETGADGVLSAESLLENPALFAGFQTAEWALGGEEGNKDG 334

Query: 559  KLDQANLLIEYLKLCEQYPVPWRIIRAHVHKMLGEWFRIHPHVRDDFNAQFKLTFKFLYD 380
            +LDQANLL+EYLKLCE+YPVPWR+IR+HVHK+LGEWFRI P VRDD N+Q KLTF+FLY+
Sbjct: 335  ELDQANLLVEYLKLCEKYPVPWRMIRSHVHKLLGEWFRIQPQVRDDLNSQSKLTFEFLYN 394

Query: 379  MVSQLRDLGVKKPLYVKNTPIGRTSANGV 293
            MV QLR+LGV+ PLY K+TP GRTS NG+
Sbjct: 395  MVDQLRELGVRIPLYTKDTPAGRTS-NGI 422


>ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
            gi|223526922|gb|EEF29128.1| tRNA-dihydrouridine synthase,
            putative [Ricinus communis]
          Length = 426

 Score =  605 bits (1561), Expect = e-170
 Identities = 299/408 (73%), Positives = 347/408 (85%), Gaps = 9/408 (2%)
 Frame = -1

Query: 1483 MAQTFTLSEKLDDNDQLCSETAQ----FPIENYEEEQSCYLGSPGISPIAIPNGHLSGES 1316
            + +T  + +  DD++ LCS   Q    F         SC LGS      A P+ +L+GES
Sbjct: 24   LTRTVAIDQDNDDDEVLCSSAHQEHTSFSTLPDTVSSSC-LGS------ATPSCYLNGES 76

Query: 1315 RIERAWAHWKKLGEPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRS 1136
            R++RAWAHW K+G+PKL+VAPMVDNSELPFR+LCRKYGA+AAYTPMLHSRIFTENEKYR+
Sbjct: 77   RVDRAWAHWNKIGKPKLLVAPMVDNSELPFRMLCRKYGADAAYTPMLHSRIFTENEKYRT 136

Query: 1135 QEFTTCKEDRPLFVQFCANDPDTLLEAAQRVAPYCDYVDINLGCPQRIARRGNYGAFLMN 956
            QEFTTC EDRPLFVQFCANDPD LLEAA++V PYCDYVDINLGCPQRIARRGNYGAFLM+
Sbjct: 137  QEFTTCNEDRPLFVQFCANDPDILLEAARKVEPYCDYVDINLGCPQRIARRGNYGAFLMD 196

Query: 955  NLPLVKSLVEKLALNLSVPVSCKIRVFPDLHDTLNYAKMLEDAGCSLLAVHGRTRDEKDG 776
            NLPLVKSLVEKLALNL+VPVSCKIR+FP L DT++YA+MLE+AGCSLLAVHGRTRDEKDG
Sbjct: 197  NLPLVKSLVEKLALNLNVPVSCKIRLFPKLDDTISYARMLEEAGCSLLAVHGRTRDEKDG 256

Query: 775  KRIRANWNAIRAVKNAIRIPVLANGNVRHVDDVHSCLEETGADGVLSAESLLENPALFAG 596
            K+ RA+W AI+AV+NA++IP+LANGNVRH+DDV +CLEETGADGVLSAESLLENPALFAG
Sbjct: 257  KKFRADWKAIKAVRNAVKIPLLANGNVRHMDDVRNCLEETGADGVLSAESLLENPALFAG 316

Query: 595  FRTAE-----EYSNEDGKLDQANLLIEYLKLCEQYPVPWRIIRAHVHKMLGEWFRIHPHV 431
            FRTAE     E S  DGKLDQA+LL+EYLKLCE+YPVPWR+IRAHVHKMLG+WFRIHPHV
Sbjct: 317  FRTAEWVVGDEESTRDGKLDQADLLVEYLKLCEEYPVPWRMIRAHVHKMLGDWFRIHPHV 376

Query: 430  RDDFNAQFKLTFKFLYDMVSQLRDLGVKKPLYVKNTPIGRTSANGVGA 287
            R++ NAQ +LTF+FLY++V QLR LGV+ PLYVK+     TSA GV A
Sbjct: 377  REELNAQSRLTFEFLYNVVDQLRALGVRIPLYVKDLD---TSATGVAA 421


>ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
            [Cucumis sativus] gi|449484028|ref|XP_004156763.1|
            PREDICTED: tRNA-dihydrouridine(16/17) synthase
            [NAD(P)(+)]-like [Cucumis sativus]
          Length = 426

 Score =  597 bits (1539), Expect = e-168
 Identities = 288/390 (73%), Positives = 336/390 (86%), Gaps = 6/390 (1%)
 Frame = -1

Query: 1450 DDNDQLCSETAQFPIENYEEEQSCYLGSPGISPI-AIPNGHLSGESRIERAWAHWKKLGE 1274
            D +D LCS + + P   +E        S   +P+   P G+LS ESRIERAWAHW KLG 
Sbjct: 38   DLDDLLCSPSHKQP--QHESSSLTNSTSNDSTPLLGSPTGYLSRESRIERAWAHWTKLGR 95

Query: 1273 PKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSQEFTTCKEDRPLFV 1094
            PKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYR+ EFTTC+EDRPLFV
Sbjct: 96   PKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFV 155

Query: 1093 QFCANDPDTLLEAAQRVAPYCDYVDINLGCPQRIARRGNYGAFLMNNLPLVKSLVEKLAL 914
            QFCANDPD LLEAA+RV PYCDYVD+NLGCPQRIARRGNYGAFLM+NLPLVK++VEKLA 
Sbjct: 156  QFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLAS 215

Query: 913  NLSVPVSCKIRVFPDLHDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKRIRANWNAIRAVK 734
            NL VPVSCKIR+FP+L DT+NYA+MLEDAGCSLLAVHGRTRDEKDGK+ RANW+AI AVK
Sbjct: 216  NLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVK 275

Query: 733  NAIRIPVLANGNVRHVDDVHSCLEETGADGVLSAESLLENPALFAGFRTAE-----EYSN 569
            NA+RIPVLANGN+RH++DV+ CL+ETG +GVLSAE+LLENPALFAGFRTAE     E + 
Sbjct: 276  NAVRIPVLANGNIRHMEDVNDCLQETGVEGVLSAETLLENPALFAGFRTAEWIEGHEENT 335

Query: 568  EDGKLDQANLLIEYLKLCEQYPVPWRIIRAHVHKMLGEWFRIHPHVRDDFNAQFKLTFKF 389
             DG LDQA+LL++YLKLCE+YPVPWR+IR+HVHK+LG+WF+IHPH+R+DFNAQ KLTF+F
Sbjct: 336  RDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEF 395

Query: 388  LYDMVSQLRDLGVKKPLYVKNTPIGRTSAN 299
            LY+MV +LR+L VK PLY+K++     S+N
Sbjct: 396  LYNMVERLRELQVKMPLYIKDSHALAISSN 425


>ref|XP_002865017.1| nitrogen regulation family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297310852|gb|EFH41276.1| nitrogen regulation family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score =  569 bits (1467), Expect = e-160
 Identities = 283/400 (70%), Positives = 328/400 (82%), Gaps = 14/400 (3%)
 Frame = -1

Query: 1486 FMAQTFTLSEKLDD--------NDQLCSETAQFPIENYEEEQSCYLGSPGISPIAIPNGH 1331
            F++QT  +++  D         +D LCSE     IE   +  +  LGSP        +  
Sbjct: 17   FISQTRAMTQNPDPKPDPSKVIDDLLCSEQRDGQIEETVDAVAASLGSP--------SRV 68

Query: 1330 LSGESRIERAWAHWKKLGEPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTEN 1151
            LS ++R+ERAWAHWKKLG PK IVAPMVDNSELPFRLLC+KYGA+AAYTPMLHSRIFTE 
Sbjct: 69   LSIDTRVERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTET 128

Query: 1150 EKYRSQEFTTCKEDRPLFVQFCANDPDTLLEAAQRVAPYCDYVDINLGCPQRIARRGNYG 971
            EKYR+QEFTTCKEDRPLFVQFCANDPDTLLEAA+RV PYCDYVDINLGCPQRIARRGNYG
Sbjct: 129  EKYRNQEFTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYG 188

Query: 970  AFLMNNLPLVKSLVEKLALNLSVPVSCKIRVFPDLHDTLNYAKMLEDAGCSLLAVHGRTR 791
            AFLM+NLPLVKSLVEKLA NL+VPVSCKIR+FP+L DTL YAKMLEDAGCSLLAVHGRTR
Sbjct: 189  AFLMDNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLQDTLKYAKMLEDAGCSLLAVHGRTR 248

Query: 790  DEKDGKRIRANWNAIRAVKNAIRIPVLANGNVRHVDDVHSCLEETGADGVLSAESLLENP 611
            DEKDGK++RA+W+AI+ VKNA+RIPVL NGNVR ++DV +C++ETG +GVLSAE+LLENP
Sbjct: 249  DEKDGKKLRADWSAIKEVKNALRIPVLGNGNVRCIEDVDNCIKETGVEGVLSAETLLENP 308

Query: 610  ALFAGFRTAEEYSNE------DGKLDQANLLIEYLKLCEQYPVPWRIIRAHVHKMLGEWF 449
            A FAGFRTAE  S        DG LDQ +L++EYLKLCE++PVPWR+IR+HVHKMLGEWF
Sbjct: 309  AAFAGFRTAEWVSENEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWF 368

Query: 448  RIHPHVRDDFNAQFKLTFKFLYDMVSQLRDLGVKKPLYVK 329
            RIHP VR+  NAQ  LTF+FLY +V QLR+LG + PLY K
Sbjct: 369  RIHPQVREQLNAQNILTFEFLYGLVDQLRELGGRVPLYKK 408


>ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
            gi|10177609|dbj|BAB10956.1| unnamed protein product
            [Arabidopsis thaliana] gi|15146316|gb|AAK83641.1|
            AT5g67220/K21H1_18 [Arabidopsis thaliana]
            gi|20908082|gb|AAM26724.1| AT5g67220/K21H1_18
            [Arabidopsis thaliana] gi|332010932|gb|AED98315.1|
            tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
          Length = 423

 Score =  567 bits (1461), Expect = e-159
 Identities = 280/378 (74%), Positives = 318/378 (84%), Gaps = 6/378 (1%)
 Frame = -1

Query: 1444 NDQLCSETAQFPIENYEEEQSCYLGSPGISPIAIPNGHLSGESRIERAWAHWKKLGEPKL 1265
            +D LCSE     IE   +     LGSP        +  LS ++R+ERAWAHWKKLG PK 
Sbjct: 39   DDILCSEQRDGQIEETVDTAPASLGSP--------SRVLSIDTRVERAWAHWKKLGRPKY 90

Query: 1264 IVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSQEFTTCKEDRPLFVQFC 1085
            IVAPMVDNSELPFRLLC+KYGA+AAYTPMLHSRIFTE EKYR+QEFTTCKEDRPLFVQFC
Sbjct: 91   IVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFTTCKEDRPLFVQFC 150

Query: 1084 ANDPDTLLEAAQRVAPYCDYVDINLGCPQRIARRGNYGAFLMNNLPLVKSLVEKLALNLS 905
            ANDPDTLLEAA+RV PYCDYVDINLGCPQRIARRGNYGAFLM+NLPLVKSLVEKLA NL+
Sbjct: 151  ANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNLN 210

Query: 904  VPVSCKIRVFPDLHDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKRIRANWNAIRAVKNAI 725
            VPVSCKIR+FP+L DTL YAKMLEDAGCSLLAVHGRTRDEKDGK+ RA+W+AI+ VKNA+
Sbjct: 211  VPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAM 270

Query: 724  RIPVLANGNVRHVDDVHSCLEETGADGVLSAESLLENPALFAGFRTA------EEYSNED 563
            RIPVLANGNVR ++DV +C++ETG +GVLSAE+LLENPA FAGFRTA      EE    D
Sbjct: 271  RIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTAEWAKDNEEEGFVD 330

Query: 562  GKLDQANLLIEYLKLCEQYPVPWRIIRAHVHKMLGEWFRIHPHVRDDFNAQFKLTFKFLY 383
            G LDQ +L++EYLKLCE++PVPWR+IR+HVHKMLGEWFRIHP VR+  NAQ  LTF+FLY
Sbjct: 331  GGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVREQLNAQNILTFEFLY 390

Query: 382  DMVSQLRDLGVKKPLYVK 329
             +V QLR+LG + PLY K
Sbjct: 391  GLVDQLRELGGRVPLYKK 408