BLASTX nr result

ID: Panax21_contig00005549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005549
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   186   2e-45
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   172   3e-41
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   168   5e-40

>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/136 (67%), Positives = 106/136 (77%)
 Frame = +2

Query: 41   VLQYLLDDVSEFLTTQKTVIEGKRDTTAEDRGCANALKSFIDYISERESQNFRSRRHDNE 220
            VLQYLLDDVS+FL+T+ T  + + D   ++ GC + LK+FID+ISERE +NFRSRRHDNE
Sbjct: 751  VLQYLLDDVSDFLSTKFTASKEESDIIVKEGGCGHVLKAFIDFISERERENFRSRRHDNE 810

Query: 221  HSVTLTIIHQSKGLEWDTVFIVKANESEIPLLHEYNGVAKXXXXXXXXXXXXXYVAITHA 400
             SVTLT IHQSKGLEWDTVFIVKANESEIPLLHE+NGV K             YV +T A
Sbjct: 811  ESVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGVVKENGTSIEEERRLLYVGMTRA 870

Query: 401  RKKLFILYVLMDSNWQ 448
            RKKLFILYVLMDS+WQ
Sbjct: 871  RKKLFILYVLMDSSWQ 886


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/136 (67%), Positives = 106/136 (77%)
 Frame = +2

Query: 41  VLQYLLDDVSEFLTTQKTVIEGKRDTTAEDRGCANALKSFIDYISERESQNFRSRRHDNE 220
           VLQYLLDDVS+FL+T+ T  + + D   ++ GC + LK+FID+ISERE +NFRSRRHDNE
Sbjct: 549 VLQYLLDDVSDFLSTKFTASKEESDIIVKEGGCGHVLKAFIDFISERERENFRSRRHDNE 608

Query: 221 HSVTLTIIHQSKGLEWDTVFIVKANESEIPLLHEYNGVAKXXXXXXXXXXXXXYVAITHA 400
            SVTLT IHQSKGLEWDTVFIVKANESEIPLLHE+NGV K             YV +T A
Sbjct: 609 ESVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGVVKENGTSIEEERRLLYVGMTRA 668

Query: 401 RKKLFILYVLMDSNWQ 448
           RKKLFILYVLMDS+WQ
Sbjct: 669 RKKLFILYVLMDSSWQ 684


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
            predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  179 bits (455), Expect = 2e-43
 Identities = 92/136 (67%), Positives = 103/136 (75%)
 Frame = +2

Query: 41   VLQYLLDDVSEFLTTQKTVIEGKRDTTAEDRGCANALKSFIDYISERESQNFRSRRHDNE 220
            VLQYLLDDVS+ L+ Q    EG+ D   E +GC + LK FIDYI+ERE +NFRSRRH+NE
Sbjct: 695  VLQYLLDDVSDVLSMQVASKEGESDVQ-EQKGCVSLLKEFIDYITEREKENFRSRRHNNE 753

Query: 221  HSVTLTIIHQSKGLEWDTVFIVKANESEIPLLHEYNGVAKXXXXXXXXXXXXXYVAITHA 400
            +SVTLT IHQSKGLEWDTVFIVKANESEIPLLHE+NG AK             YVA+T A
Sbjct: 754  NSVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGSAKENGNSIEEERRLFYVAMTRA 813

Query: 401  RKKLFILYVLMDSNWQ 448
            RKKLFI YV MDSNWQ
Sbjct: 814  RKKLFITYVAMDSNWQ 829


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
            gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
            pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  172 bits (436), Expect = 3e-41
 Identities = 87/136 (63%), Positives = 100/136 (73%)
 Frame = +2

Query: 41   VLQYLLDDVSEFLTTQKTVIEGKRDTTAEDRGCANALKSFIDYISERESQNFRSRRHDNE 220
            VLQYLLDDVS+FL+ Q   I+       E+RGC   LK FIDYI+ERE +NFRS RH+NE
Sbjct: 728  VLQYLLDDVSDFLSMQ-CAIKDVGAVREEERGCITTLKDFIDYITEREKENFRSWRHENE 786

Query: 221  HSVTLTIIHQSKGLEWDTVFIVKANESEIPLLHEYNGVAKXXXXXXXXXXXXXYVAITHA 400
            +SVTLT IHQSKGLEWD VFI+KANESEIPLLHE+NG+ K             YVA+T A
Sbjct: 787  NSVTLTTIHQSKGLEWDIVFIIKANESEIPLLHEFNGITKENGTSIEEERRLLYVAMTRA 846

Query: 401  RKKLFILYVLMDSNWQ 448
            RKKLFILY  +DSNWQ
Sbjct: 847  RKKLFILYYTLDSNWQ 862


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/136 (61%), Positives = 104/136 (76%)
 Frame = +2

Query: 41   VLQYLLDDVSEFLTTQKTVIEGKRDTTAEDRGCANALKSFIDYISERESQNFRSRRHDNE 220
            VLQYLLDDVSEFL+T+   ++ +R+ + ED+GC   LK+FIDY+ ERE +NF +RR DNE
Sbjct: 760  VLQYLLDDVSEFLSTKLVEVKEEREIS-EDKGCIFVLKAFIDYLLEREKENFGARRKDNE 818

Query: 221  HSVTLTIIHQSKGLEWDTVFIVKANESEIPLLHEYNGVAKXXXXXXXXXXXXXYVAITHA 400
            +SVTLT IHQ+KGLEWD VFIVKAN+SEIPLLH++ G  K             YVA+T A
Sbjct: 819  NSVTLTTIHQAKGLEWDVVFIVKANDSEIPLLHDFKGTVKDTAALLEEERRLLYVAMTRA 878

Query: 401  RKKLFILYVLMDSNWQ 448
            R+KLFIL+V+MDSNWQ
Sbjct: 879  REKLFILHVMMDSNWQ 894


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