BLASTX nr result

ID: Panax21_contig00005538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005538
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171068.1| PREDICTED: WD repeat domain-containing prote...   246   1e-63
ref|XP_004151629.1| PREDICTED: WD repeat domain-containing prote...   246   1e-63
ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote...   246   1e-63
ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote...   242   3e-62
gb|ACR33097.1| WD-repeat protein [Carica papaya]                      241   4e-62

>ref|XP_004171068.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 177

 Score =  246 bits (628), Expect = 1e-63
 Identities = 114/122 (93%), Positives = 118/122 (96%)
 Frame = +1

Query: 1   ELPTTEATVLKGHEGAVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 180
           ELPT E+ VLKGHEG VLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR
Sbjct: 5   ELPTKESNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64

Query: 181 DVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDSEVNAVKFNEYAAVVVSAGYDR 360
           DVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRGHD EVNAVKFNEYA+VVVSAGYD+
Sbjct: 65  DVHVTPDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKFNEYASVVVSAGYDQ 124

Query: 361 SL 366
           SL
Sbjct: 125 SL 126


>ref|XP_004151629.1| PREDICTED: WD repeat domain-containing protein 83-like, partial
           [Cucumis sativus]
          Length = 212

 Score =  246 bits (628), Expect = 1e-63
 Identities = 114/122 (93%), Positives = 118/122 (96%)
 Frame = +1

Query: 1   ELPTTEATVLKGHEGAVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 180
           ELPT E+ VLKGHEG VLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR
Sbjct: 5   ELPTKESNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64

Query: 181 DVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDSEVNAVKFNEYAAVVVSAGYDR 360
           DVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRGHD EVNAVKFNEYA+VVVSAGYD+
Sbjct: 65  DVHVTPDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKFNEYASVVVSAGYDQ 124

Query: 361 SL 366
           SL
Sbjct: 125 SL 126


>ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 299

 Score =  246 bits (628), Expect = 1e-63
 Identities = 114/122 (93%), Positives = 118/122 (96%)
 Frame = +1

Query: 1   ELPTTEATVLKGHEGAVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 180
           ELPT E+ VLKGHEG VLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR
Sbjct: 5   ELPTKESNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64

Query: 181 DVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDSEVNAVKFNEYAAVVVSAGYDR 360
           DVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRGHD EVNAVKFNEYA+VVVSAGYD+
Sbjct: 65  DVHVTPDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKFNEYASVVVSAGYDQ 124

Query: 361 SL 366
           SL
Sbjct: 125 SL 126


>ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera]
           gi|297743030|emb|CBI35897.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  242 bits (617), Expect = 3e-62
 Identities = 112/121 (92%), Positives = 116/121 (95%)
 Frame = +1

Query: 4   LPTTEATVLKGHEGAVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 183
           LP  EA VL+GHEGAVLAARFN DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD
Sbjct: 6   LPKKEANVLRGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65

Query: 184 VHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDSEVNAVKFNEYAAVVVSAGYDRS 363
           VHV PDNSKLCSCGGDRQ+FYWDV+TGRVIRKFRGHDSEVNAVKFNEYA+VVVSAGYDRS
Sbjct: 66  VHVAPDNSKLCSCGGDRQLFYWDVSTGRVIRKFRGHDSEVNAVKFNEYASVVVSAGYDRS 125

Query: 364 L 366
           L
Sbjct: 126 L 126


>gb|ACR33097.1| WD-repeat protein [Carica papaya]
          Length = 259

 Score =  241 bits (615), Expect = 4e-62
 Identities = 112/122 (91%), Positives = 115/122 (94%)
 Frame = +1

Query: 1   ELPTTEATVLKGHEGAVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 180
           ELP  EA VLKGHEGAVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR
Sbjct: 7   ELPRKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 66

Query: 181 DVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDSEVNAVKFNEYAAVVVSAGYDR 360
           DVHVT DNSK CSCGGDRQ+FYWDVATGRVIRKFRGHD EVNAVKFNEYA VVVSAGYD+
Sbjct: 67  DVHVTSDNSKFCSCGGDRQIFYWDVATGRVIRKFRGHDGEVNAVKFNEYAGVVVSAGYDQ 126

Query: 361 SL 366
           SL
Sbjct: 127 SL 128


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