BLASTX nr result
ID: Panax21_contig00005532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00005532
(2142 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320271.1| predicted protein [Populus trichocarpa] gi|2... 154 2e-58
ref|XP_002515219.1| Polygalacturonase precursor, putative [Ricin... 154 8e-58
emb|CBI37004.3| unnamed protein product [Vitis vinifera] 150 1e-55
ref|XP_002272733.2| PREDICTED: polygalacturonase At1g48100-like ... 150 1e-55
ref|XP_003553676.1| PREDICTED: polygalacturonase At1g48100-like ... 144 2e-54
>ref|XP_002320271.1| predicted protein [Populus trichocarpa] gi|222861044|gb|EEE98586.1|
predicted protein [Populus trichocarpa]
Length = 438
Score = 154 bits (389), Expect(3) = 2e-58
Identities = 63/79 (79%), Positives = 71/79 (89%)
Frame = -3
Query: 1462 CQGGLVFQVDGTLMPPDGPEYWPEKYIKHQWLVFYRVNEMSLQGAGQIDGRGEPWWNLPC 1283
CQGGLVFQVDGTLMPPDGPE WP+K + QWLVFYR+NEMSL G G IDGRGE WW+LPC
Sbjct: 97 CQGGLVFQVDGTLMPPDGPESWPQKNSRRQWLVFYRINEMSLLGGGVIDGRGEKWWDLPC 156
Query: 1282 KPHRGVNGTTLPGPCDSPV 1226
KPH+G+NGTT+PGPCDSP+
Sbjct: 157 KPHKGINGTTMPGPCDSPI 175
Score = 70.5 bits (171), Expect(3) = 2e-58
Identities = 31/36 (86%), Positives = 36/36 (100%)
Frame = -2
Query: 1115 MSSNLTVQGLKIKDSPQFHFRFDSCRNVHIESIHIT 1008
MSSNLTVQGLKIK+SPQF+FRFD+C+NVH+ESIHIT
Sbjct: 181 MSSNLTVQGLKIKNSPQFNFRFDNCKNVHVESIHIT 216
Score = 50.8 bits (120), Expect(3) = 2e-58
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1
Query: 918 SIGSGCYDVDIRNITCGPGHGI 853
SIGSGCYDVDIRNITCGP HGI
Sbjct: 250 SIGSGCYDVDIRNITCGPSHGI 271
>ref|XP_002515219.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223545699|gb|EEF47203.1| Polygalacturonase precursor,
putative [Ricinus communis]
Length = 537
Score = 154 bits (388), Expect(3) = 8e-58
Identities = 62/79 (78%), Positives = 71/79 (89%)
Frame = -3
Query: 1462 CQGGLVFQVDGTLMPPDGPEYWPEKYIKHQWLVFYRVNEMSLQGAGQIDGRGEPWWNLPC 1283
CQGG+VFQVDGT+MPPDGPE WP+K K QWLVFYR+NE+SL G G IDGRGE WW+LPC
Sbjct: 196 CQGGIVFQVDGTIMPPDGPESWPQKNSKRQWLVFYRINELSLLGGGTIDGRGEKWWDLPC 255
Query: 1282 KPHRGVNGTTLPGPCDSPV 1226
KPH+G+NGTTLPGPCDSP+
Sbjct: 256 KPHKGINGTTLPGPCDSPI 274
Score = 68.9 bits (167), Expect(3) = 8e-58
Identities = 30/36 (83%), Positives = 36/36 (100%)
Frame = -2
Query: 1115 MSSNLTVQGLKIKDSPQFHFRFDSCRNVHIESIHIT 1008
MSSNLTVQG++IK+SPQF+FRFD+CRNVHI+SIHIT
Sbjct: 280 MSSNLTVQGIRIKNSPQFNFRFDNCRNVHIDSIHIT 315
Score = 50.8 bits (120), Expect(3) = 8e-58
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1
Query: 918 SIGSGCYDVDIRNITCGPGHGI 853
SIGSGCYDVDIRNITCGP HGI
Sbjct: 349 SIGSGCYDVDIRNITCGPSHGI 370
>emb|CBI37004.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 150 bits (379), Expect(3) = 1e-55
Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Frame = -3
Query: 1525 SSSLFSPVDFMSNFMESNLIS--CQGGLVFQVDGTLMPPDGPEYWPEKYIKHQWLVFYRV 1352
S+ +F P + S ++S + + CQ LVFQVDGTL PPDGP+ WP+ K QWLVFYR+
Sbjct: 121 SAIVFVPYGY-SFMIQSTIFTGPCQSRLVFQVDGTLTPPDGPDSWPQNNSKRQWLVFYRI 179
Query: 1351 NEMSLQGAGQIDGRGEPWWNLPCKPHRGVNGTTLPGPCDSPV 1226
NEMSLQG G IDGRGE WWNLPCKPH+G+NGTTLPGPCDSP+
Sbjct: 180 NEMSLQGGGLIDGRGENWWNLPCKPHKGINGTTLPGPCDSPI 221
Score = 66.6 bits (161), Expect(3) = 1e-55
Identities = 30/36 (83%), Positives = 36/36 (100%)
Frame = -2
Query: 1115 MSSNLTVQGLKIKDSPQFHFRFDSCRNVHIESIHIT 1008
MSSNLTVQGL+IK+SPQF+FRFD+CR+VHIESI+IT
Sbjct: 227 MSSNLTVQGLRIKNSPQFNFRFDNCRDVHIESIYIT 262
Score = 49.7 bits (117), Expect(3) = 1e-55
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -1
Query: 918 SIGSGCYDVDIRNITCGPGHGI 853
SIGSGCYDVDI+NITCGP HGI
Sbjct: 296 SIGSGCYDVDIKNITCGPSHGI 317
>ref|XP_002272733.2| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 465
Score = 150 bits (379), Expect(3) = 1e-55
Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Frame = -3
Query: 1525 SSSLFSPVDFMSNFMESNLIS--CQGGLVFQVDGTLMPPDGPEYWPEKYIKHQWLVFYRV 1352
S+ +F P + S ++S + + CQ LVFQVDGTL PPDGP+ WP+ K QWLVFYR+
Sbjct: 102 SAIVFVPYGY-SFMIQSTIFTGPCQSRLVFQVDGTLTPPDGPDSWPQNNSKRQWLVFYRI 160
Query: 1351 NEMSLQGAGQIDGRGEPWWNLPCKPHRGVNGTTLPGPCDSPV 1226
NEMSLQG G IDGRGE WWNLPCKPH+G+NGTTLPGPCDSP+
Sbjct: 161 NEMSLQGGGLIDGRGENWWNLPCKPHKGINGTTLPGPCDSPI 202
Score = 66.6 bits (161), Expect(3) = 1e-55
Identities = 30/36 (83%), Positives = 36/36 (100%)
Frame = -2
Query: 1115 MSSNLTVQGLKIKDSPQFHFRFDSCRNVHIESIHIT 1008
MSSNLTVQGL+IK+SPQF+FRFD+CR+VHIESI+IT
Sbjct: 208 MSSNLTVQGLRIKNSPQFNFRFDNCRDVHIESIYIT 243
Score = 49.7 bits (117), Expect(3) = 1e-55
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -1
Query: 918 SIGSGCYDVDIRNITCGPGHGI 853
SIGSGCYDVDI+NITCGP HGI
Sbjct: 277 SIGSGCYDVDIKNITCGPSHGI 298
>ref|XP_003553676.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 462
Score = 144 bits (362), Expect(3) = 2e-54
Identities = 59/79 (74%), Positives = 69/79 (87%)
Frame = -3
Query: 1462 CQGGLVFQVDGTLMPPDGPEYWPEKYIKHQWLVFYRVNEMSLQGAGQIDGRGEPWWNLPC 1283
CQG LV +VDGTLMPPDGPE WP+ +HQWLVFYR+N MSL+G+G IDGRGE WW+LPC
Sbjct: 121 CQGVLVLKVDGTLMPPDGPESWPKNNSRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPC 180
Query: 1282 KPHRGVNGTTLPGPCDSPV 1226
KPH+G +GTTLPGPCDSP+
Sbjct: 181 KPHKGPHGTTLPGPCDSPI 199
Score = 69.7 bits (169), Expect(3) = 2e-54
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = -2
Query: 1115 MSSNLTVQGLKIKDSPQFHFRFDSCRNVHIESIHIT 1008
MSSNLTVQGL+IK+SPQFHFRFD C+NVHIESI+IT
Sbjct: 205 MSSNLTVQGLRIKNSPQFHFRFDGCKNVHIESIYIT 240
Score = 48.5 bits (114), Expect(3) = 2e-54
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -1
Query: 918 SIGSGCYDVDIRNITCGPGHGI 853
SIGSGC DVDI+NITCGPGHGI
Sbjct: 274 SIGSGCNDVDIKNITCGPGHGI 295