BLASTX nr result

ID: Panax21_contig00005525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005525
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535114.1| hypothetical protein RCOM_2156040 [Ricinus c...    74   9e-12
ref|XP_002319244.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10

>ref|XP_002535114.1| hypothetical protein RCOM_2156040 [Ricinus communis]
            gi|223524008|gb|EEF27270.1| hypothetical protein
            RCOM_2156040 [Ricinus communis]
          Length = 1087

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -3

Query: 508  PFLVAKVQKNVNQDHHPGRAAIKAEEDDVXXXXXXXXSFPFPDKDQAVQPVTNTEQLLPE 329
            PF V  V+KN  Q+    +   K EED V        SFPFPDK+Q V+PV+ TEQLLPE
Sbjct: 1011 PFFVGMVEKNNTQNKTSDKVTDKEEEDGVSASLSLSLSFPFPDKEQTVKPVSKTEQLLPE 1070

Query: 328  RRRFNPS-PLFGGFSDK 281
            RR  N S  LFGGF DK
Sbjct: 1071 RRHVNTSLLLFGGFPDK 1087


>ref|XP_002319244.1| predicted protein [Populus trichocarpa] gi|222857620|gb|EEE95167.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -3

Query: 490 VQKNVNQDHHPGRAAIKAEEDDVXXXXXXXXSFPFPDKDQAVQPVTNTEQLLPERRRFNP 311
           V+KN NQ+  P +   K E+D V        SFPFPDK+Q V+PV+ TEQL+PERR  N 
Sbjct: 256 VEKNDNQNKPPDKVLNKEEDDGVSASLSLSLSFPFPDKEQTVKPVSKTEQLVPERRHVNT 315

Query: 310 S-PLFGGFSDK 281
           S  LFG  SDK
Sbjct: 316 SLLLFGDLSDK 326


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