BLASTX nr result

ID: Panax21_contig00005499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005499
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269494.1| PREDICTED: uncharacterized protein LOC100250...   124   8e-27
gb|ABK96719.1| unknown [Populus trichocarpa x Populus deltoides]      119   3e-25
ref|XP_002309012.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
gb|ADB08056.1| microtubule-associated protein [Nicotiana bentham...   113   1e-23
ref|XP_002527807.1| conserved hypothetical protein [Ricinus comm...   109   2e-22

>ref|XP_002269494.1| PREDICTED: uncharacterized protein LOC100250355 [Vitis vinifera]
          Length = 830

 Score =  124 bits (311), Expect = 8e-27
 Identities = 67/95 (70%), Positives = 77/95 (81%)
 Frame = +2

Query: 11   QHNEIGSSTTDSFDNSSVISKGDTMDQNVMVTFRNLGQSMLENIQVIESAFQQDWGQAGT 190
            Q +  G+ST+D F NSSV SKGD  DQ +M T +NLGQSMLENIQVIES FQQD GQ G+
Sbjct: 737  QGDTSGASTSDEFSNSSVNSKGDAADQIMMSTLKNLGQSMLENIQVIESVFQQDRGQGGS 796

Query: 191  SENYSKNGLVGRGQVTAVTALKELRKISNILLSEM 295
             EN+SKN +VG+GQVTA+ ALKELRKISN LLSEM
Sbjct: 797  LENFSKNVIVGKGQVTAMAALKELRKISN-LLSEM 830


>gb|ABK96719.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 823

 Score =  119 bits (297), Expect = 3e-25
 Identities = 64/95 (67%), Positives = 75/95 (78%)
 Frame = +2

Query: 11   QHNEIGSSTTDSFDNSSVISKGDTMDQNVMVTFRNLGQSMLENIQVIESAFQQDWGQAGT 190
            Q N IGSS+ +   N    SKG+++DQNVM T RN GQSMLE+IQ+IES FQQD GQ G+
Sbjct: 730  QINSIGSSSVNGSCNPYASSKGESVDQNVMGTLRNFGQSMLEHIQIIESVFQQDRGQVGS 789

Query: 191  SENYSKNGLVGRGQVTAVTALKELRKISNILLSEM 295
             EN+SK  LVG+GQVTA+TALKELRKISN LLSEM
Sbjct: 790  LENFSKTALVGKGQVTAMTALKELRKISN-LLSEM 823


>ref|XP_002309012.1| predicted protein [Populus trichocarpa] gi|222854988|gb|EEE92535.1|
           predicted protein [Populus trichocarpa]
          Length = 804

 Score =  118 bits (296), Expect = 4e-25
 Identities = 64/95 (67%), Positives = 78/95 (82%)
 Frame = +2

Query: 11  QHNEIGSSTTDSFDNSSVISKGDTMDQNVMVTFRNLGQSMLENIQVIESAFQQDWGQAGT 190
           Q N IGSS+ +   NS   S+G+++DQNVM T RNLGQSMLE+IQVIES FQQD GQ G+
Sbjct: 711 QINSIGSSSVNGSCNSYASSEGESVDQNVMGTLRNLGQSMLEHIQVIESVFQQDRGQVGS 770

Query: 191 SENYSKNGLVGRGQVTAVTALKELRKISNILLSEM 295
            EN+SK+ +VG+GQVTA+TALKELRKISN LL+EM
Sbjct: 771 LENFSKSVIVGKGQVTALTALKELRKISN-LLTEM 804


>gb|ADB08056.1| microtubule-associated protein [Nicotiana benthamiana]
          Length = 813

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/81 (75%), Positives = 70/81 (86%)
 Frame = +2

Query: 53  NSSVISKGDTMDQNVMVTFRNLGQSMLENIQVIESAFQQDWGQAGTSENYSKNGLVGRGQ 232
           N+S ISKG+++DQN+MV+ RNLGQSMLENIQVIES FQQD  Q GT EN SKN +VG+GQ
Sbjct: 734 NNSGISKGESVDQNLMVSLRNLGQSMLENIQVIESLFQQDRDQVGTLENLSKNVIVGKGQ 793

Query: 233 VTAVTALKELRKISNILLSEM 295
           VTA+ ALKELRKISN LLSEM
Sbjct: 794 VTAMAALKELRKISN-LLSEM 813


>ref|XP_002527807.1| conserved hypothetical protein [Ricinus communis]
           gi|223532803|gb|EEF34579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 825

 Score =  109 bits (273), Expect = 2e-22
 Identities = 60/88 (68%), Positives = 68/88 (77%)
 Frame = +2

Query: 32  STTDSFDNSSVISKGDTMDQNVMVTFRNLGQSMLENIQVIESAFQQDWGQAGTSENYSKN 211
           ++ D   N     KGD +DQNVM T RNLG SMLE+IQVIES FQQD  Q G+ EN+SKN
Sbjct: 739 TSADGSSNLYTSGKGDVLDQNVMGTLRNLGHSMLEHIQVIESVFQQDRVQMGSLENFSKN 798

Query: 212 GLVGRGQVTAVTALKELRKISNILLSEM 295
            +VG+GQVTAVTALKELRKISN LLSEM
Sbjct: 799 VIVGKGQVTAVTALKELRKISN-LLSEM 825


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