BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005479
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   607   e-171
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   603   e-170
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   599   e-169
ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [S...   591   e-166
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   590   e-166

>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  607 bits (1565), Expect = e-171
 Identities = 299/364 (82%), Positives = 325/364 (89%), Gaps = 4/364 (1%)
 Frame = +2

Query: 206  PKAS----STNRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPGVVLL 373
            PKAS    S NRR  +ADTAA +SL+ +     V PAKSEE LSEWER+ LP+DPGVVLL
Sbjct: 43   PKASLHNSSINRRHFVADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLL 102

Query: 374  DIAFVPDDPSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNCISFKGKEGWI 553
            DIAFVPDD +HGFLLGTRQTI+ETKDGG TWAPRSIPSAE+EDFNYRFN ISFKGKEGWI
Sbjct: 103  DIAFVPDDMNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWI 162

Query: 554  VGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNW 733
            VGKPAILL+TSD G+SWERIPLSA+LPGDMVYIKATGEKSAEMVTDEGAIYVTSN+GYNW
Sbjct: 163  VGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNW 222

Query: 734  RAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNFYLTWKPGQPY 913
            +AAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+G YVAVSSRGNFYLTW+PGQP+
Sbjct: 223  KAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPF 282

Query: 914  WQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEIPVQSRGLGILDVG 1093
            WQPHNRAIARRIQNMGWRAD              SKGTGI+EEFEE+PVQSRG GILDVG
Sbjct: 283  WQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVG 342

Query: 1094 YRSQEEAWAAGGSGVLLKTNNSGKTWTRDRAADNIAANLYSVKFINNKQGFVLGNDGVLL 1273
            YRS+EEAWAAGGSGVLLKT N G++WTRD+AADNIAANLYSVKFIN+K+GFVLGNDGVLL
Sbjct: 343  YRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLL 402

Query: 1274 KYLG 1285
            +YLG
Sbjct: 403  QYLG 406


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  603 bits (1556), Expect = e-170
 Identities = 302/368 (82%), Positives = 328/368 (89%), Gaps = 5/368 (1%)
 Frame = +2

Query: 197  RIVPKAS----STNRRKLIADTAALISLAPAFPGFDVLPAKSEEQL-SEWERVSLPVDPG 361
            R+VP+A     S  RR L+A+TAA IS+AP   G +  PAKSEE L SEWERV LP+DPG
Sbjct: 39   RVVPRACLQKPSLTRRHLLAETAA-ISVAPLILGIEP-PAKSEEPLLSEWERVYLPIDPG 96

Query: 362  VVLLDIAFVPDDPSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNCISFKGK 541
            VVLLDIAFVPDD SHGFLLGTRQTIMETKDGGNTW PRSIPSAEDEDFNYRFN ISFKGK
Sbjct: 97   VVLLDIAFVPDDLSHGFLLGTRQTIMETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGK 156

Query: 542  EGWIVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTSNR 721
            EGWIVGKP+ILL+TSD G+SWERIPLSA+LPGD+VYIKATGEKSAEMVTDEGAIYVTSNR
Sbjct: 157  EGWIVGKPSILLYTSDAGESWERIPLSAQLPGDIVYIKATGEKSAEMVTDEGAIYVTSNR 216

Query: 722  GYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNFYLTWKP 901
            GYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+G+YVAVSSRGNFYLTW+P
Sbjct: 217  GYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEP 276

Query: 902  GQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEIPVQSRGLGI 1081
            GQPYWQPHNRA+ARRIQNMGWRAD              SKGTGI+E+FEEIPVQSRG GI
Sbjct: 277  GQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEDFEEIPVQSRGFGI 336

Query: 1082 LDVGYRSQEEAWAAGGSGVLLKTNNSGKTWTRDRAADNIAANLYSVKFINNKQGFVLGND 1261
            LDVGYRS+EEAWAAGGSGVLL+T N GKTWTRD+AADNIAANLYSVKFI++ +GFVLGND
Sbjct: 337  LDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGND 396

Query: 1262 GVLLKYLG 1285
            GVLL++LG
Sbjct: 397  GVLLRFLG 404


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  599 bits (1545), Expect = e-169
 Identities = 295/374 (78%), Positives = 324/374 (86%), Gaps = 7/374 (1%)
 Frame = +2

Query: 185  SHHHRIVPKASST-------NRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVS 343
            S +  ++ KASS+       +RR+ IA+TAAL    P       L A+SE+ LSEWERV 
Sbjct: 26   SRNRSLIVKASSSEDDFSRSSRRRFIAETAALSVSLPQ------LTARSEDALSEWERVY 79

Query: 344  LPVDPGVVLLDIAFVPDDPSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNC 523
            LP+DPGVVLLDIAFVPDDP+HGFLLGTRQTI+ETKDGGNTWAPRSIPSAEDEDFNYRFN 
Sbjct: 80   LPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNS 139

Query: 524  ISFKGKEGWIVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAI 703
            ISFKGKEGWIVGKP+ILL+TSD GDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAI
Sbjct: 140  ISFKGKEGWIVGKPSILLYTSDAGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAI 199

Query: 704  YVTSNRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNF 883
            YVT+NRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+G YVAVSSRGNF
Sbjct: 200  YVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 259

Query: 884  YLTWKPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEIPVQ 1063
            YLTW+PGQP+WQPHNRA+ARRIQNMGWRAD              SKG G+TEEFEE+PVQ
Sbjct: 260  YLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGKGLTEEFEEVPVQ 319

Query: 1064 SRGLGILDVGYRSQEEAWAAGGSGVLLKTNNSGKTWTRDRAADNIAANLYSVKFINNKQG 1243
            SRG GILDVGYRS +EAWAAGGSG+LL+T N GK+W RD+AADNIAANLYSVKFI+ K+G
Sbjct: 320  SRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDEKKG 379

Query: 1244 FVLGNDGVLLKYLG 1285
            FVLGNDGVLL+YLG
Sbjct: 380  FVLGNDGVLLRYLG 393


>ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [Sorghum bicolor]
            gi|241917298|gb|EER90442.1| hypothetical protein
            SORBIDRAFT_10g031120 [Sorghum bicolor]
          Length = 397

 Score =  591 bits (1524), Expect = e-166
 Identities = 290/374 (77%), Positives = 319/374 (85%), Gaps = 7/374 (1%)
 Frame = +2

Query: 185  SHHHRIVPKASSTNRRKLIADTAALISLAPAFPGFDVLP-------AKSEEQLSEWERVS 343
            +H     P A+S +RR+ IA TAA  +++P      VLP       A     LSEWERV 
Sbjct: 29   AHSESTPPGAASVDRRRFIAHTAAAAAVSPL-----VLPRWTPAARADGAPALSEWERVF 83

Query: 344  LPVDPGVVLLDIAFVPDDPSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNC 523
            LP+DPGVVLLDIAFVPDDPSHGFLLGTRQTI+ETKDGGNTW PRSIPSAEDEDFNYRFN 
Sbjct: 84   LPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNS 143

Query: 524  ISFKGKEGWIVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAI 703
            +SFKGKEGWI+GKPAILLHTSD G+SWERIPLSA+LPG+MVYIKATGE+SAEMVTDEGAI
Sbjct: 144  VSFKGKEGWIIGKPAILLHTSDAGESWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAI 203

Query: 704  YVTSNRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNF 883
            YVTSNRGYNW+AAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+G YVAVSSRGNF
Sbjct: 204  YVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 263

Query: 884  YLTWKPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEIPVQ 1063
            YLTW+PGQP+WQPHNRA+ARRIQNMGWRAD              SKGTGI+E+FEE+ VQ
Sbjct: 264  YLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEDFEEVQVQ 323

Query: 1064 SRGLGILDVGYRSQEEAWAAGGSGVLLKTNNSGKTWTRDRAADNIAANLYSVKFINNKQG 1243
            SRG GILDVGYRSQEEAWAAGGSGVLLKT N GK W RD+AADNIAANLYSVKF+++ +G
Sbjct: 324  SRGFGILDVGYRSQEEAWAAGGSGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLDDSKG 383

Query: 1244 FVLGNDGVLLKYLG 1285
            FVLGNDGVLL+YLG
Sbjct: 384  FVLGNDGVLLRYLG 397


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  590 bits (1522), Expect = e-166
 Identities = 295/377 (78%), Positives = 320/377 (84%), Gaps = 6/377 (1%)
 Frame = +2

Query: 173  RNSQSHHHRIVPKASST---NRRKLIADTAALISL---APAFPGFDVLPAKSEEQLSEWE 334
            R   SH     P+ S     NRR  I+ TA+L SL   +P         A +E+ LSEWE
Sbjct: 18   RPQNSHSPSQQPRLSQRPELNRRHFISQTASLSSLPLLSPLILNPQQANAAAEDSLSEWE 77

Query: 335  RVSLPVDPGVVLLDIAFVPDDPSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYR 514
            RV LP+DPGVVLLDIAFVPDD +HGFLLGTRQTIMETKDGGNTW  RSIPSAEDEDFNYR
Sbjct: 78   RVYLPIDPGVVLLDIAFVPDDTNHGFLLGTRQTIMETKDGGNTWVQRSIPSAEDEDFNYR 137

Query: 515  FNCISFKGKEGWIVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDE 694
            FN ISFKGKEGWIVGKPAILL+T+D G++WERIPLSA+LPGDMVYIKATGEKSAEMVTDE
Sbjct: 138  FNSISFKGKEGWIVGKPAILLYTADSGETWERIPLSAQLPGDMVYIKATGEKSAEMVTDE 197

Query: 695  GAIYVTSNRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSR 874
            GAIY+TSNRGYNWRAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSP GNYVAVSSR
Sbjct: 198  GAIYITSNRGYNWRAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPNGNYVAVSSR 257

Query: 875  GNFYLTWKPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEI 1054
            GNFYLTW+PGQ +WQPHNRAIARRIQNMGWRAD              SKGTGI+EEFEEI
Sbjct: 258  GNFYLTWEPGQAFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEEFEEI 317

Query: 1055 PVQSRGLGILDVGYRSQEEAWAAGGSGVLLKTNNSGKTWTRDRAADNIAANLYSVKFINN 1234
            PVQSRG GILDVGYRS+EEAWAAGGSGVLL+T N GKTWTRD+AADNIAANLYSVKFI++
Sbjct: 318  PVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDD 377

Query: 1235 KQGFVLGNDGVLLKYLG 1285
            K+GFVLGNDGVLL+YLG
Sbjct: 378  KKGFVLGNDGVLLRYLG 394