BLASTX nr result

ID: Panax21_contig00005476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005476
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256...   478   e-132
emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]   464   e-128
ref|XP_002525329.1| Transmembrane protein, putative [Ricinus com...   452   e-124
ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2...   450   e-124
ref|XP_002883706.1| integral membrane family protein [Arabidopsi...   423   e-116

>ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera]
            gi|297739206|emb|CBI28857.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  478 bits (1229), Expect = e-132
 Identities = 236/334 (70%), Positives = 280/334 (83%)
 Frame = -2

Query: 1004 DSDSGDQITPLLTHSEKPKIDIFSVSYSRRKPNREQVSRLVETETSPIAQSVMWLWGGSR 825
            +S   ++I PLL  SEKPKI+IFSVSYSRRKP REQV++    E +   Q ++W W GSR
Sbjct: 29   NSVGSEEIEPLLAVSEKPKINIFSVSYSRRKP-REQVTK--SAEDASFTQFILWAWSGSR 85

Query: 824  YSGLLCMALSSSIYCIMEILSDVFSAKSIPLFEIAFARCTIMAILSFIWLRKSGQPVFGP 645
             SGLLCMALSS+IYCIME LSD+FSA+SIPLFE AF RCT+  ILS+ WLR+SGQP+FGP
Sbjct: 86   CSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFTRCTVTLILSYFWLRRSGQPIFGP 145

Query: 644  TNVRKLLVSRALVGYVSLMSFVYCIQRLPLSQGIILSFTTPIMASVAARIVLHEKIKIPE 465
            T+VR LLVSRAL+GY+SL+SFVYCIQRLPLSQ ++LSFTTPIMAS+ ARI+LHEK+ I E
Sbjct: 146  THVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLSFTTPIMASIMARIILHEKLNIAE 205

Query: 464  IGGLACSFFGVLFIFRSVLTTQEGMAKTGEARDLNMQGSHHIYAVVIGLFSSIAGGISLC 285
            IGGLACSF GVLFIFR +L  Q G+ K  EA ++ + GS HIYAV++GL SSI+GGIS C
Sbjct: 206  IGGLACSFIGVLFIFRPILAAQGGLPKAEEANNIYVGGSDHIYAVLVGLVSSISGGISYC 265

Query: 284  LIRAGAKASDQPVVTVFSFGILASPAAALCTFAFQEFVMPDLYSFLLMVVLGVLAFFAEI 105
            L RAGAKASDQPV+TVF+FG+L SPAAA+CTFAFQ+FV+P  YSF LMV+L VLAFFAE+
Sbjct: 266  LTRAGAKASDQPVITVFAFGMLGSPAAAICTFAFQDFVLPSFYSFFLMVILAVLAFFAEV 325

Query: 104  FLARGLQLEKTSKVANIQYLEAALSQFWGMASSR 3
            FLARGLQLEKTSK  NIQY+EAALSQ WG+ SS+
Sbjct: 326  FLARGLQLEKTSKATNIQYIEAALSQLWGLGSSK 359


>emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]
          Length = 413

 Score =  464 bits (1195), Expect = e-128
 Identities = 236/357 (66%), Positives = 280/357 (78%), Gaps = 23/357 (6%)
 Frame = -2

Query: 1004 DSDSGDQITPLLTHSEKPKIDIFSVSYSRRKPNREQVSRLVETETSPIAQSVMWLWGGSR 825
            +S   ++I PLL  SEKPKI+IFSVSYSRRKP REQV++    E +   Q ++W W GSR
Sbjct: 29   NSVGSEEIEPLLAVSEKPKINIFSVSYSRRKP-REQVTK--SAEDASFTQFILWAWSGSR 85

Query: 824  YSGLLCMALSSSIYCIMEILSDVFSAKSIPLFEIAFARCTIMAILSFIWLRKSGQPVFGP 645
             SGLLCMALSS+IYCIME LSD+FSA+SIPLFE AF RCT+  ILS+ WLR+SGQP+FGP
Sbjct: 86   CSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFTRCTVTLILSYFWLRRSGQPIFGP 145

Query: 644  TNVRKLLVSRALVGYVSLMSFVYCIQRLPLSQGIILSFTTPIMASVAARIVLHEKIKIPE 465
            T+VR LLVSRAL+GY+SL+SFVYCIQRLPLSQ ++LSFTTPIMAS+ ARI+LHEK+ I E
Sbjct: 146  THVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLSFTTPIMASIMARIILHEKLNIAE 205

Query: 464  IG-----------------------GLACSFFGVLFIFRSVLTTQEGMAKTGEARDLNMQ 354
            IG                       GLACSF GVLFIFR +L  Q G+ K  EA ++ + 
Sbjct: 206  IGELYTYFCEAGGETDCFVBCIYFPGLACSFIGVLFIFRPILAAQGGLPKAEEANNIYVG 265

Query: 353  GSHHIYAVVIGLFSSIAGGISLCLIRAGAKASDQPVVTVFSFGILASPAAALCTFAFQEF 174
            GS HIYAV++GL SSI+GGIS CL RAGAKASDQPV+TVF+FG+L SPAAA+CTFAFQ+F
Sbjct: 266  GSDHIYAVLVGLVSSISGGISYCLTRAGAKASDQPVITVFAFGMLGSPAAAICTFAFQDF 325

Query: 173  VMPDLYSFLLMVVLGVLAFFAEIFLARGLQLEKTSKVANIQYLEAALSQFWGMASSR 3
            V+P  YSF LMV+L VLAFFAE+FLARGLQLEKTSK  NIQY+EAALSQ WG+ SS+
Sbjct: 326  VLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSKATNIQYIEAALSQLWGLGSSK 382


>ref|XP_002525329.1| Transmembrane protein, putative [Ricinus communis]
            gi|223535388|gb|EEF37062.1| Transmembrane protein,
            putative [Ricinus communis]
          Length = 425

 Score =  452 bits (1162), Expect = e-124
 Identities = 225/329 (68%), Positives = 270/329 (82%)
 Frame = -2

Query: 989  DQITPLLTHSEKPKIDIFSVSYSRRKPNREQVSRLVETETSPIAQSVMWLWGGSRYSGLL 810
            D+ITPLL    KPKI+IFSVS+SRRKP REQV++L ETET P  Q ++W+W GSRYSG+L
Sbjct: 47   DEITPLL----KPKINIFSVSHSRRKP-REQVAKLPETETPPFIQLILWVWSGSRYSGIL 101

Query: 809  CMALSSSIYCIMEILSDVFSAKSIPLFEIAFARCTIMAILSFIWLRKSGQPVFGPTNVRK 630
            CMALSSSIY +MEILS  FS +SIPLFE AF RCTI+ ILS+IWLR+SGQP+FG  + RK
Sbjct: 102  CMALSSSIYFVMEILSHSFSTRSIPLFETAFMRCTIVLILSYIWLRRSGQPIFGAVHARK 161

Query: 629  LLVSRALVGYVSLMSFVYCIQRLPLSQGIILSFTTPIMASVAARIVLHEKIKIPEIGGLA 450
            LL  RAL G++SL+SF+YCIQRLP SQ IIL+FTTPI+AS+ AR++LHEK+KI +IGGL 
Sbjct: 162  LLFLRALTGFLSLLSFIYCIQRLPFSQAIILNFTTPIVASILARLMLHEKLKIADIGGLT 221

Query: 449  CSFFGVLFIFRSVLTTQEGMAKTGEARDLNMQGSHHIYAVVIGLFSSIAGGISLCLIRAG 270
            CSFFGVLFI+R +L TQ      GEA + +  GSHH+YAV+ GL S I GGIS C I+AG
Sbjct: 222  CSFFGVLFIYRQILRTQ-----AGEANNTSASGSHHVYAVLAGLLSLITGGISYCFIKAG 276

Query: 269  AKASDQPVVTVFSFGILASPAAALCTFAFQEFVMPDLYSFLLMVVLGVLAFFAEIFLARG 90
            AKASDQPVVTVFSFG+L+SPAA +C FAF+EFV+PD  SFLLM++LGVLAF  E+ LARG
Sbjct: 277  AKASDQPVVTVFSFGLLSSPAAGICAFAFEEFVVPDFCSFLLMLILGVLAFIVEVLLARG 336

Query: 89   LQLEKTSKVANIQYLEAALSQFWGMASSR 3
            LQLEK SK  N+QY+EAALSQ WG+ SSR
Sbjct: 337  LQLEKISKATNVQYIEAALSQLWGIDSSR 365


>ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  450 bits (1157), Expect = e-124
 Identities = 215/331 (64%), Positives = 274/331 (82%)
 Frame = -2

Query: 995  SGDQITPLLTHSEKPKIDIFSVSYSRRKPNREQVSRLVETETSPIAQSVMWLWGGSRYSG 816
            + ++ITPLL    KPKI+IFSVS+SRRKP REQ +++ + ET P+ Q V+W+WGGSRYSG
Sbjct: 37   ASEEITPLL----KPKINIFSVSHSRRKP-REQGTKIPDIETFPVTQFVLWIWGGSRYSG 91

Query: 815  LLCMALSSSIYCIMEILSDVFSAKSIPLFEIAFARCTIMAILSFIWLRKSGQPVFGPTNV 636
            LLC+A+SS+IY +ME+LSD FSA+SIPLFE AFARCTI  ILS++WLR +GQP+FGP + 
Sbjct: 92   LLCVAISSTIYFVMEVLSDFFSAQSIPLFETAFARCTITLILSYLWLRGNGQPIFGPAHA 151

Query: 635  RKLLVSRALVGYVSLMSFVYCIQRLPLSQGIILSFTTPIMASVAARIVLHEKIKIPEIGG 456
            RK L SRAL G +SL+SF+YCI+RLPLSQ I+LSFTTPIMAS+ ARI+LHEK+KI ++GG
Sbjct: 152  RKFLFSRALTGCLSLLSFIYCIRRLPLSQAIVLSFTTPIMASIVARIILHEKLKIVDVGG 211

Query: 455  LACSFFGVLFIFRSVLTTQEGMAKTGEARDLNMQGSHHIYAVVIGLFSSIAGGISLCLIR 276
            LACSFFGVLFIFR +LTTQ  + + GE   + + G +H+  V++ LFSSI GGIS CL++
Sbjct: 212  LACSFFGVLFIFRQILTTQGALLRVGETNYIAIMGRNHVLTVLVALFSSITGGISYCLVK 271

Query: 275  AGAKASDQPVVTVFSFGILASPAAALCTFAFQEFVMPDLYSFLLMVVLGVLAFFAEIFLA 96
            AGAKASDQP+ TVFSFGILA+PA  +C FAF+EFV+P+ Y+F LM++LG+L+F AE+F A
Sbjct: 272  AGAKASDQPLATVFSFGILATPATGMCAFAFEEFVLPNFYTFFLMLILGLLSFSAEVFFA 331

Query: 95   RGLQLEKTSKVANIQYLEAALSQFWGMASSR 3
            RGLQLEKTSK AN+ Y+E ALSQ WG+ S R
Sbjct: 332  RGLQLEKTSKAANVLYMEVALSQLWGIGSWR 362


>ref|XP_002883706.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329546|gb|EFH59965.1| integral membrane family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 401

 Score =  423 bits (1087), Expect = e-116
 Identities = 206/331 (62%), Positives = 262/331 (79%)
 Frame = -2

Query: 995  SGDQITPLLTHSEKPKIDIFSVSYSRRKPNREQVSRLVETETSPIAQSVMWLWGGSRYSG 816
            S D+I PLL  +++P+I+IFS SY+R KP REQV ++ ETE SP+ Q   W+W GSRYSG
Sbjct: 39   SSDEIIPLLNQNQRPRINIFSASYTRHKP-REQVIKVTETEISPVTQFSSWIWSGSRYSG 97

Query: 815  LLCMALSSSIYCIMEILSDVFSAKSIPLFEIAFARCTIMAILSFIWLRKSGQPVFGPTNV 636
            LLCM LSS++Y IME++SD FS + IPLFE AF RCTI+ ILS++WL++ GQP+FGP + 
Sbjct: 98   LLCMVLSSTLYLIMELVSDTFSVQPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHA 157

Query: 635  RKLLVSRALVGYVSLMSFVYCIQRLPLSQGIILSFTTPIMASVAARIVLHEKIKIPEIGG 456
            RKLLVSRALVGY+SL SF++ IQ LPLSQ I+LSF  PIMAS+AAR+V+HEK+KI +IGG
Sbjct: 158  RKLLVSRALVGYLSLFSFIFSIQMLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGG 217

Query: 455  LACSFFGVLFIFRSVLTTQEGMAKTGEARDLNMQGSHHIYAVVIGLFSSIAGGISLCLIR 276
            LACSFFGVLFIF   LT Q G   T E    N++G+HHIYA  +GLFSSI GGI+ CLI+
Sbjct: 218  LACSFFGVLFIFGPTLTVQVGSEGTNE----NLKGNHHIYAFWLGLFSSITGGITYCLIK 273

Query: 275  AGAKASDQPVVTVFSFGILASPAAALCTFAFQEFVMPDLYSFLLMVVLGVLAFFAEIFLA 96
            A AKAS+QPV+TVFSFG++A PAAA+C F+F+ FV+P   + + M+VLG+LAF AE+ LA
Sbjct: 274  AAAKASEQPVITVFSFGLVACPAAAICMFSFESFVLPAFDTLITMIVLGLLAFCAEVLLA 333

Query: 95   RGLQLEKTSKVANIQYLEAALSQFWGMASSR 3
            RGLQLEK SK ANI Y+E  LSQ W +++ +
Sbjct: 334  RGLQLEKISKAANILYIEVVLSQLWIVSTGK 364


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