BLASTX nr result
ID: Panax21_contig00005460
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00005460 (1866 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2... 92 5e-16 emb|CBI16624.3| unnamed protein product [Vitis vinifera] 91 1e-15 ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265... 91 1e-15 ref|XP_002511630.1| structural constituent of nuclear pore, puta... 91 1e-15 emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera] 91 1e-15 >ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1| predicted protein [Populus trichocarpa] Length = 241 Score = 92.0 bits (227), Expect = 5e-16 Identities = 47/52 (90%), Positives = 51/52 (98%), Gaps = 1/52 (1%) Frame = -1 Query: 153 QSMEDEAERIYKDERG-LLDDEAASTRDAMYEQAEFIERELEQMTEQIKSII 1 QS+E+EAERIYKDERG LLDDEAASTRDAMYEQAEFIERE+EQMTEQIKS+I Sbjct: 123 QSIEEEAERIYKDERGSLLDDEAASTRDAMYEQAEFIEREMEQMTEQIKSVI 174 Score = 67.8 bits (164), Expect(2) = 4e-10 Identities = 32/37 (86%), Positives = 34/37 (91%) Frame = -3 Query: 364 PKLPSEITGKTVEEIIEEWNTELQGRTGKFRKQVIAI 254 PKLPSEITGKTVEEII+EWN+ELQ RTGKFRKQ AI Sbjct: 37 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQATAI 73 Score = 24.6 bits (52), Expect(2) = 4e-10 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 Query: 491 PCFNFYSWNNFKYQFFCS 438 PCFN ++NNF Q +CS Sbjct: 4 PCFNCCTYNNF--QHYCS 19 >emb|CBI16624.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 90.5 bits (223), Expect = 1e-15 Identities = 47/51 (92%), Positives = 50/51 (98%), Gaps = 1/51 (1%) Frame = -1 Query: 150 SMEDEAERIYKDERGLL-DDEAASTRDAMYEQAEFIERELEQMTEQIKSII 1 S+E+EAERIYKDERGLL DDEAASTRDAMYEQAEFIERE+EQMTEQIKSII Sbjct: 688 SIEEEAERIYKDERGLLLDDEAASTRDAMYEQAEFIEREMEQMTEQIKSII 738 Score = 68.9 bits (167), Expect = 4e-09 Identities = 46/106 (43%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Frame = -3 Query: 562 SFCLSTKTPTTASASQPQPAA---LFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 392 SF L TK+ AS+SQ Q LFG Sbjct: 532 SFSLPTKSSAPASSSQAQTTTASPLFGVPPSTAVAVTSSSTTAVQTSSSLVVASSSGTNS 591 Query: 391 XXXXXXXXAPKLPSEITGKTVEEIIEEWNTELQGRTGKFRKQVIAI 254 APK+PSEITGKTVEEII+EWNTELQ RTGKFRKQ AI Sbjct: 592 TVTTAVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAI 637 >ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera] Length = 775 Score = 90.5 bits (223), Expect = 1e-15 Identities = 47/51 (92%), Positives = 50/51 (98%), Gaps = 1/51 (1%) Frame = -1 Query: 150 SMEDEAERIYKDERGLL-DDEAASTRDAMYEQAEFIERELEQMTEQIKSII 1 S+E+EAERIYKDERGLL DDEAASTRDAMYEQAEFIERE+EQMTEQIKSII Sbjct: 655 SIEEEAERIYKDERGLLLDDEAASTRDAMYEQAEFIEREMEQMTEQIKSII 705 Score = 68.9 bits (167), Expect = 4e-09 Identities = 46/106 (43%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Frame = -3 Query: 562 SFCLSTKTPTTASASQPQPAA---LFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 392 SF L TK+ AS+SQ Q LFG Sbjct: 499 SFSLPTKSSAPASSSQAQTTTASPLFGVPPSTAVAVTSSSTTAVQTSSSLVVASSSGTNS 558 Query: 391 XXXXXXXXAPKLPSEITGKTVEEIIEEWNTELQGRTGKFRKQVIAI 254 APK+PSEITGKTVEEII+EWNTELQ RTGKFRKQ AI Sbjct: 559 TVTTAVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAI 604 >ref|XP_002511630.1| structural constituent of nuclear pore, putative [Ricinus communis] gi|223548810|gb|EEF50299.1| structural constituent of nuclear pore, putative [Ricinus communis] Length = 811 Score = 90.5 bits (223), Expect = 1e-15 Identities = 46/52 (88%), Positives = 50/52 (96%), Gaps = 1/52 (1%) Frame = -1 Query: 153 QSMEDEAERIYKDERGLL-DDEAASTRDAMYEQAEFIERELEQMTEQIKSII 1 QSME+EAERIYKDERGLL DDEAASTRDAMYEQAE +ERELEQMT+QIKS+I Sbjct: 690 QSMEEEAERIYKDERGLLLDDEAASTRDAMYEQAELVERELEQMTQQIKSVI 741 Score = 67.4 bits (163), Expect = 1e-08 Identities = 32/37 (86%), Positives = 33/37 (89%) Frame = -3 Query: 364 PKLPSEITGKTVEEIIEEWNTELQGRTGKFRKQVIAI 254 PKLPSEITGKTVEEII+EWN ELQ RTGKFRKQ AI Sbjct: 604 PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQAAAI 640 >emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera] Length = 279 Score = 90.5 bits (223), Expect = 1e-15 Identities = 47/51 (92%), Positives = 50/51 (98%), Gaps = 1/51 (1%) Frame = -1 Query: 150 SMEDEAERIYKDERGLL-DDEAASTRDAMYEQAEFIERELEQMTEQIKSII 1 S+E+EAERIYKDERGLL DDEAASTRDAMYEQAEFIERE+EQMTEQIKSII Sbjct: 159 SIEEEAERIYKDERGLLLDDEAASTRDAMYEQAEFIEREMEQMTEQIKSII 209 Score = 68.6 bits (166), Expect = 6e-09 Identities = 32/37 (86%), Positives = 34/37 (91%) Frame = -3 Query: 364 PKLPSEITGKTVEEIIEEWNTELQGRTGKFRKQVIAI 254 PK+PSEITGKTVEEII+EWNTELQ RTGKFRKQ AI Sbjct: 35 PKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAI 71