BLASTX nr result
ID: Panax21_contig00005424
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00005424 (1295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23698.3| unnamed protein product [Vitis vinifera] 76 2e-11 ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C,... 72 4e-10 >emb|CBI23698.3| unnamed protein product [Vitis vinifera] Length = 388 Score = 75.9 bits (185), Expect = 2e-11 Identities = 44/67 (65%), Positives = 51/67 (76%) Frame = +1 Query: 253 LVESYNLVVGATWEVAMVMLMVIQDMEIKDGDLTPHKLLGIMGLRPVDLMVGKLDMVVGM 432 LV SY VV ATWEVAMVMLM IQDME++ G+L H+LL IM LR + LMVGKL MVV Sbjct: 301 LVMSYRGVVVATWEVAMVMLMGIQDMEMQHGNLIHHRLLEIMELRQMVLMVGKLAMVVD- 359 Query: 433 VVLRPDR 453 +VL PD+ Sbjct: 360 IVLSPDK 366 >ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Length = 470 Score = 71.6 bits (174), Expect = 4e-10 Identities = 50/158 (31%), Positives = 56/158 (35%), Gaps = 4/158 (2%) Frame = +3 Query: 3 SAYGTQASSGYGTMGYGNTP-WXXXXXXXXXXXXXXPVS---APTXXXXXXXXXXXXXXX 170 S++ +QA SGYG MGYGN W P + + Sbjct: 313 SSWSSQAPSGYGAMGYGNAASWGANTGAGSGGPGSAPAGQSPSGSAGYGNQGYGYGSYGG 372 Query: 171 XXXXXXNPAAYGAVGGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGYGNQGWRS 350 NPA Y AVGGR N GYG GWRS Sbjct: 373 NDGSYGNPAGYSAVGGRSGGAPNSNVGAGGELQGSGGGYMGSDYGDANGNPGYGTAGWRS 432 Query: 351 DPSQASGNYGAQASXXXXXXXXXXXXXXXAPTRQGQQQ 464 DPSQASGNYG QA+ A RQGQQQ Sbjct: 433 DPSQASGNYGTQANGPHGAQVGYGGGYGGAQARQGQQQ 470