BLASTX nr result

ID: Panax21_contig00005422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005422
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus c...    99   3e-19
dbj|BAF01324.1| hypothetical protein [Arabidopsis thaliana]            99   4e-19
ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis...    99   4e-19
ref|XP_002881813.1| seven in absentia family protein [Arabidopsi...    98   6e-19
ref|XP_002876454.1| seven in absentia family protein [Arabidopsi...    98   8e-19

>ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus communis]
           gi|223525415|gb|EEF28013.1| Ubiquitin ligase SINAT2,
           putative [Ricinus communis]
          Length = 304

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +2

Query: 257 LPCRYQSLGCHDIFPYYSKLKHEQHCRFRPYNCPYAGSECSIT 385
           LPC+YQ LGCHDIFPYYSKLKHEQHCRFRPY+CPYAGSECSIT
Sbjct: 112 LPCKYQDLGCHDIFPYYSKLKHEQHCRFRPYSCPYAGSECSIT 154


>dbj|BAF01324.1| hypothetical protein [Arabidopsis thaliana]
          Length = 219

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +2

Query: 257 LPCRYQSLGCHDIFPYYSKLKHEQHCRFRPYNCPYAGSECSIT 385
           +PCRYQ+LGCHDIFPYYSKLKHEQHCRFRPY CPYAGSECS+T
Sbjct: 116 VPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVT 158


>ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
           gi|46577554|sp|Q9M2P4.1|SINA2_ARATH RecName: Full=E3
           ubiquitin-protein ligase SINAT2; AltName: Full=Seven in
           absentia homolog 2 gi|6729547|emb|CAB67632.1| putative
           protein [Arabidopsis thaliana]
           gi|21593355|gb|AAM65304.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|105830184|gb|ABF74716.1| At3g58040 [Arabidopsis
           thaliana] gi|332646214|gb|AEE79735.1| E3
           ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
          Length = 308

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +2

Query: 257 LPCRYQSLGCHDIFPYYSKLKHEQHCRFRPYNCPYAGSECSIT 385
           +PCRYQ+LGCHDIFPYYSKLKHEQHCRFRPY CPYAGSECS+T
Sbjct: 116 VPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVT 158


>ref|XP_002881813.1| seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327652|gb|EFH58072.1| seven in absentia family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +2

Query: 257 LPCRYQSLGCHDIFPYYSKLKHEQHCRFRPYNCPYAGSECSIT 385
           +PCRYQ+LGCHDIFPYYSKLKHEQHCRFR YNCPYAGSECS+T
Sbjct: 113 VPCRYQNLGCHDIFPYYSKLKHEQHCRFRSYNCPYAGSECSVT 155


>ref|XP_002876454.1| seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322292|gb|EFH52713.1| seven in absentia family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 38/43 (88%), Positives = 42/43 (97%)
 Frame = +2

Query: 257 LPCRYQSLGCHDIFPYYSKLKHEQHCRFRPYNCPYAGSECSIT 385
           +PCRYQ+LGCHDIFPYYSKLKHEQHCRFRPY CPYAGSEC++T
Sbjct: 117 VPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECAVT 159


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