BLASTX nr result

ID: Panax21_contig00005417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005417
         (2644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263503.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   204   1e-49
gb|ACG24973.1| hypothetical protein [Zea mays]                        203   2e-49
gb|ACF87350.1| unknown [Zea mays] gi|413951985|gb|AFW84634.1| pu...   202   5e-49
ref|XP_002458736.1| hypothetical protein SORBIDRAFT_03g039320 [S...   200   1e-48
gb|ACN35207.1| unknown [Zea mays] gi|413951986|gb|AFW84635.1| pu...   200   1e-48

>ref|XP_002263503.1| PREDICTED: ubiquitin-conjugating enzyme E2 13 [Vitis vinifera]
            gi|297740393|emb|CBI30575.3| unnamed protein product
            [Vitis vinifera]
          Length = 168

 Score =  204 bits (519), Expect = 1e-49
 Identities = 98/127 (77%), Positives = 104/127 (81%)
 Frame = -3

Query: 1814 DLCKRPVDGFSAGLVDESNVFEWSVTIIGPPDTLYDGGYFNAIMXXXXXXXXXXXSVRFT 1635
            DLCKRPVDGFSAGLVDESNVFEWSV+IIGPPDTLYDGG+FNAIM           SVRFT
Sbjct: 17   DLCKRPVDGFSAGLVDESNVFEWSVSIIGPPDTLYDGGFFNAIMSFPPNYPNSPPSVRFT 76

Query: 1634 SEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHTVEXXXXXXXXXXXSPNDES 1455
            S+MWHPNVY +G+VCISILHPPGEDPNGYELASERWTPVHTVE           SPNDES
Sbjct: 77   SDMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDES 136

Query: 1454 PANIDAA 1434
            PANI+AA
Sbjct: 137  PANIEAA 143


>gb|ACG24973.1| hypothetical protein [Zea mays]
          Length = 149

 Score =  203 bits (516), Expect = 2e-49
 Identities = 98/129 (75%), Positives = 103/129 (79%)
 Frame = -3

Query: 1814 DLCKRPVDGFSAGLVDESNVFEWSVTIIGPPDTLYDGGYFNAIMXXXXXXXXXXXSVRFT 1635
            DL K PVDGFSAGLVD+SNVFEW VTIIGPPDTLYDGGYFNAIM           SVRFT
Sbjct: 18   DLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPSVRFT 77

Query: 1634 SEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHTVEXXXXXXXXXXXSPNDES 1455
            SEMWHPNVY +G+VCISILHPPGEDPNGYELASERWTPVHTVE           SPNDES
Sbjct: 78   SEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDES 137

Query: 1454 PANIDAAVS 1428
            PANI+AA+S
Sbjct: 138  PANIEAAIS 146


>gb|ACF87350.1| unknown [Zea mays] gi|413951985|gb|AFW84634.1| putative
            ubiquitin-conjugating enzyme family [Zea mays]
          Length = 151

 Score =  202 bits (513), Expect = 5e-49
 Identities = 98/128 (76%), Positives = 102/128 (79%)
 Frame = -3

Query: 1814 DLCKRPVDGFSAGLVDESNVFEWSVTIIGPPDTLYDGGYFNAIMXXXXXXXXXXXSVRFT 1635
            DL K PVDGFSAGLVD+SNVFEW VTIIGPPDTLYDGGYFNAIM           SVRFT
Sbjct: 18   DLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPSVRFT 77

Query: 1634 SEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHTVEXXXXXXXXXXXSPNDES 1455
            SEMWHPNVY +G+VCISILHPPGEDPNGYELASERWTPVHTVE           SPNDES
Sbjct: 78   SEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDES 137

Query: 1454 PANIDAAV 1431
            PANI+AAV
Sbjct: 138  PANIEAAV 145


>ref|XP_002458736.1| hypothetical protein SORBIDRAFT_03g039320 [Sorghum bicolor]
            gi|241930711|gb|EES03856.1| hypothetical protein
            SORBIDRAFT_03g039320 [Sorghum bicolor]
          Length = 169

 Score =  200 bits (509), Expect = 1e-48
 Identities = 97/127 (76%), Positives = 101/127 (79%)
 Frame = -3

Query: 1814 DLCKRPVDGFSAGLVDESNVFEWSVTIIGPPDTLYDGGYFNAIMXXXXXXXXXXXSVRFT 1635
            DL K PVDGFSAGLVD+SNVFEW VTIIGPPDTLYDGGYFNAIM           SVRFT
Sbjct: 18   DLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPSVRFT 77

Query: 1634 SEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHTVEXXXXXXXXXXXSPNDES 1455
            SEMWHPNVY +G+VCISILHPPGEDPNGYELASERWTPVHTVE           SPNDES
Sbjct: 78   SEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDES 137

Query: 1454 PANIDAA 1434
            PANI+AA
Sbjct: 138  PANIEAA 144


>gb|ACN35207.1| unknown [Zea mays] gi|413951986|gb|AFW84635.1| putative
            ubiquitin-conjugating enzyme family [Zea mays]
          Length = 161

 Score =  200 bits (509), Expect = 1e-48
 Identities = 97/127 (76%), Positives = 101/127 (79%)
 Frame = -3

Query: 1814 DLCKRPVDGFSAGLVDESNVFEWSVTIIGPPDTLYDGGYFNAIMXXXXXXXXXXXSVRFT 1635
            DL K PVDGFSAGLVD+SNVFEW VTIIGPPDTLYDGGYFNAIM           SVRFT
Sbjct: 18   DLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPSVRFT 77

Query: 1634 SEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHTVEXXXXXXXXXXXSPNDES 1455
            SEMWHPNVY +G+VCISILHPPGEDPNGYELASERWTPVHTVE           SPNDES
Sbjct: 78   SEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDES 137

Query: 1454 PANIDAA 1434
            PANI+AA
Sbjct: 138  PANIEAA 144


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