BLASTX nr result

ID: Panax21_contig00005415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005415
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O82569.1|SUI1_PIMBR RecName: Full=Protein translation factor ...   152   8e-35
ref|XP_003551882.1| PREDICTED: protein translation factor SUI1 h...   142   8e-32
ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 h...   142   8e-32
ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 h...   140   4e-31
dbj|BAJ34327.1| unnamed protein product [Thellungiella halophila]     139   7e-31

>sp|O82569.1|SUI1_PIMBR RecName: Full=Protein translation factor SUI1 homolog
           gi|3659907|gb|AAC61599.1| protein translation factor
           SUI1 homolog [Pimpinella brachycarpa]
          Length = 113

 Score =  152 bits (384), Expect = 8e-35
 Identities = 77/84 (91%), Positives = 80/84 (95%), Gaps = 1/84 (1%)
 Frame = +3

Query: 537 MVDIDIQIPTAFDPFAEAQIAEATGS-KEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL 713
           MVD DIQIPT+FDPFAEA+I +ATGS KEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL
Sbjct: 1   MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL 60

Query: 714 KDLKKAYCCNGTVVNDKELGKVIQ 785
           KDLKKA CCNGTVVNDKELGKVIQ
Sbjct: 61  KDLKKALCCNGTVVNDKELGKVIQ 84


>ref|XP_003551882.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Glycine
           max]
          Length = 141

 Score =  142 bits (358), Expect = 8e-32
 Identities = 66/83 (79%), Positives = 77/83 (92%)
 Frame = +3

Query: 537 MVDIDIQIPTAFDPFAEAQIAEATGSKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILK 716
           MVD++IQ+PT FDPFAEA+ ++A G+KEYVHIRIQQRNG+KSLTTVQGLKKE SY+KILK
Sbjct: 1   MVDLEIQVPTPFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILK 60

Query: 717 DLKKAYCCNGTVVNDKELGKVIQ 785
           DLKK +CCNGTVV DKELGK+IQ
Sbjct: 61  DLKKEFCCNGTVVQDKELGKIIQ 83


>ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Glycine
           max]
          Length = 112

 Score =  142 bits (358), Expect = 8e-32
 Identities = 66/83 (79%), Positives = 78/83 (93%)
 Frame = +3

Query: 537 MVDIDIQIPTAFDPFAEAQIAEATGSKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILK 716
           MVD++IQ+P+AFDPFAEA+ ++A G+KEYVHIRIQQRNG+KSLTTVQGLKKE SY+KILK
Sbjct: 1   MVDLEIQVPSAFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILK 60

Query: 717 DLKKAYCCNGTVVNDKELGKVIQ 785
           DLKK +CCNGTVV DKELGK+IQ
Sbjct: 61  DLKKDFCCNGTVVQDKELGKIIQ 83


>ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis
           sativus] gi|449523439|ref|XP_004168731.1| PREDICTED:
           protein translation factor SUI1 homolog 2-like [Cucumis
           sativus]
          Length = 112

 Score =  140 bits (352), Expect = 4e-31
 Identities = 64/83 (77%), Positives = 76/83 (91%)
 Frame = +3

Query: 537 MVDIDIQIPTAFDPFAEAQIAEATGSKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILK 716
           MVD+D+QIP+AFDPFA+A+ ++A G+KEYVHIR+QQRNG+K LTTVQGLKKE SYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 717 DLKKAYCCNGTVVNDKELGKVIQ 785
           DLKK +CCNG VV DKELGK+IQ
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQ 83


>dbj|BAJ34327.1| unnamed protein product [Thellungiella halophila]
          Length = 112

 Score =  139 bits (350), Expect = 7e-31
 Identities = 65/83 (78%), Positives = 76/83 (91%)
 Frame = +3

Query: 537 MVDIDIQIPTAFDPFAEAQIAEATGSKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILK 716
           MV++DIQIP+AFDPFAEAQ  +A G+KEYVHIRIQQRNG+KSLTTVQGLKK+ SY++ILK
Sbjct: 1   MVELDIQIPSAFDPFAEAQDTDAPGTKEYVHIRIQQRNGKKSLTTVQGLKKDYSYERILK 60

Query: 717 DLKKAYCCNGTVVNDKELGKVIQ 785
           DLKK +CCNG VV DKELGK+IQ
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQ 83


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