BLASTX nr result

ID: Panax21_contig00005405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005405
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a...   114   1e-36
gb|AFK43650.1| unknown [Lotus japonicus]                              113   2e-36
ref|XP_002531970.1| 60S ribosomal protein L23a, putative [Ricinu...   112   4e-36
ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [...   111   7e-36
ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [...   111   7e-36

>sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a
           gi|13560777|gb|AAK30202.1|AF349961_1 ribosome protein
           L23a [Daucus carota]
          Length = 154

 Score =  114 bits (285), Expect(2) = 1e-36
 Identities = 54/57 (94%), Positives = 56/57 (98%)
 Frame = -3

Query: 522 FHRPKTLTKERKPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 352
           FHRP+TLTK+R PKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI
Sbjct: 44  FHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 100



 Score = 65.5 bits (158), Expect(2) = 1e-36
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -1

Query: 248 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 156
           TLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 124 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 154


>gb|AFK43650.1| unknown [Lotus japonicus]
          Length = 155

 Score =  113 bits (282), Expect(2) = 2e-36
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = -3

Query: 522 FHRPKTLTKERKPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 352
           FHRPKTLTKER PKYPRISATPRNKLD YQILK+PLTTESAMKKIEDNNTLVFIVDI
Sbjct: 45  FHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDI 101



 Score = 65.5 bits (158), Expect(2) = 2e-36
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -1

Query: 248 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 156
           TLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 125 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 155


>ref|XP_002531970.1| 60S ribosomal protein L23a, putative [Ricinus communis]
           gi|223528367|gb|EEF30406.1| 60S ribosomal protein L23a,
           putative [Ricinus communis]
          Length = 164

 Score =  112 bits (280), Expect(2) = 4e-36
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = -3

Query: 522 FHRPKTLTKERKPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 352
           FHRPKTL K+R PKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVD+
Sbjct: 54  FHRPKTLKKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDL 110



 Score = 65.5 bits (158), Expect(2) = 4e-36
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -1

Query: 248 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 156
           TLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 134 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 164


>ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449519086|ref|XP_004166566.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  111 bits (278), Expect(2) = 7e-36
 Identities = 53/57 (92%), Positives = 54/57 (94%)
 Frame = -3

Query: 522 FHRPKTLTKERKPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 352
           FHRPKTL K+R PKYPRIS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI
Sbjct: 43  FHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 99



 Score = 65.5 bits (158), Expect(2) = 7e-36
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -1

Query: 248 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 156
           TLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 123 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449514958|ref|XP_004164525.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  111 bits (278), Expect(2) = 7e-36
 Identities = 53/57 (92%), Positives = 54/57 (94%)
 Frame = -3

Query: 522 FHRPKTLTKERKPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 352
           FHRPKTL K+R PKYPRIS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI
Sbjct: 43  FHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDI 99



 Score = 65.5 bits (158), Expect(2) = 7e-36
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -1

Query: 248 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 156
           TLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 123 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


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