BLASTX nr result

ID: Panax21_contig00005394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005394
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37449.3| unnamed protein product [Vitis vinifera]               65   4e-08
ref|XP_003539889.1| PREDICTED: uncharacterized protein LOC100791...    63   2e-07
ref|XP_002519869.1| conserved hypothetical protein [Ricinus comm...    45   2e-06

>emb|CBI37449.3| unnamed protein product [Vitis vinifera]
          Length = 81

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 44/81 (54%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
 Frame = -2

Query: 1020 MPCTPEVGSDFYLKHLIS--KTWRKCVSGQFSTRIGLFHSRKCLIGVFSSLEIS-LFPSS 850
            MP +  V  D  L+ L+S  KTW KC SGQ +T    FHSRKC  G FS LEIS LF  S
Sbjct: 1    MPFSFLVLRDLDLEDLLSFLKTWSKCASGQLATSFEFFHSRKCSTGGFSPLEISFLFLLS 60

Query: 849  TALSEQL-LYHQYGRRDAIFF 790
             ALS QL L  Q+ R +AIFF
Sbjct: 61   IALSAQLYLDDQHNRPNAIFF 81


>ref|XP_003539889.1| PREDICTED: uncharacterized protein LOC100791461 [Glycine max]
          Length = 41

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 30/41 (73%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = -1

Query: 961 MEKVCLWSVFYQNRAFSFQEVLDWRFFFLGDFL-VSFVNCT 842
           ME VC W+  YQ R F+FQEVLDWR F LGDFL VSFVNCT
Sbjct: 1   MEGVCFWTNCYQYRFFAFQEVLDWRVFILGDFLRVSFVNCT 41


>ref|XP_002519869.1| conserved hypothetical protein [Ricinus communis]
           gi|223540915|gb|EEF42473.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 139

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = -3

Query: 812 GGVMQFFSEIGVGCLTHIYNALPIKVSFKILQKPSSG 702
           GGVMQ FSEIGVG L H++NAL ++   K+  K SSG
Sbjct: 47  GGVMQNFSEIGVGSLVHLFNALLMQHPVKVFGKMSSG 83



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 1020 MPCTPEVGSDFYLKHLIS--KTWRKCVSGQFSTRIGLFHSRKCLIG 889
            MP   +V  D  L    S  KTW K  SGQ ++   LFH +KC IG
Sbjct: 1    MPVGFKVVPDLDLNCFFSFHKTWSKFASGQIASTTELFHFKKCSIG 46


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