BLASTX nr result

ID: Panax21_contig00005384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005384
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001243291.1| malate dehydrogenase, cytoplasmic-like [Glyc...   489   e-169
ref|XP_002332745.1| predicted protein [Populus trichocarpa] gi|2...   483   e-168
gb|AFK38114.1| unknown [Lotus japonicus]                              478   e-167
ref|NP_001236661.1| cytosolic malate dehydrogenase [Glycine max]...   481   e-166
ref|XP_002312583.1| predicted protein [Populus trichocarpa] gi|1...   477   e-166

>ref|NP_001243291.1| malate dehydrogenase, cytoplasmic-like [Glycine max]
           gi|366985127|gb|AEX09388.1| malate dehydrogenase
           [Glycine max]
          Length = 328

 Score =  489 bits (1258), Expect(2) = e-169
 Identities = 242/267 (90%), Positives = 251/267 (94%)
 Frame = +1

Query: 43  MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 222
           MAK+P RVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAE+LNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 223 AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 402
           AAFPLLKGVVATTDVVEACTGVN+AVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 403 AAANCKVLVVANPANTNALILKDFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 582
           AAANCKVLVVANPANTNALILK+FAPSIPEKNI+CLTRLDHNRALGQISERLN+QVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNIQVSDVK 180

Query: 583 NVIIWGNHSSTQYPDVNHATVGDKPVREFVADDEWLNGEFIKIVQQRGAAIIKARKXXXX 762
           NVIIWGNHSSTQYPDVNHATVG+KPVRE +ADD WLNGEFI  VQQRGAAIIKARK    
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVGEKPVRELIADDAWLNGEFITTVQQRGAAIIKARKLSSA 240

Query: 763 XXXXXXXCDHIRDWVLGTPEGTWVSMG 843
                  CDHIRDWVLGTP+GTWVSMG
Sbjct: 241 LSAASAACDHIRDWVLGTPQGTWVSMG 267



 Score =  134 bits (338), Expect(2) = e-169
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 905  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELSEEK 1084
            GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEW IVQGL IDEFSRKKLDLTAEELSEEK
Sbjct: 261  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWTIVQGLPIDEFSRKKLDLTAEELSEEK 320

Query: 1085 ALAFSCLS 1108
            ALA+SCL+
Sbjct: 321  ALAYSCLN 328


>ref|XP_002332745.1| predicted protein [Populus trichocarpa] gi|222833073|gb|EEE71550.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  483 bits (1242), Expect(2) = e-168
 Identities = 245/271 (90%), Positives = 249/271 (91%), Gaps = 4/271 (1%)
 Frame = +1

Query: 43  MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 222
           MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 223 AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 402
           AAFPLLKGVVATTDVVEACTGVN+AVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 403 AAANCKVLVVANPANTNALILKDFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 582
           AAANCKVLVVANPANTNALILK+FAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 583 NVIIWGNHSSTQYPDVNHATV----GDKPVREFVADDEWLNGEFIKIVQQRGAAIIKARK 750
           NVIIWGNHSSTQYPDVNHATV    G+KPVRE V DD WLN EFI  VQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVKDDAWLNAEFITTVQQRGAAIIKARK 240

Query: 751 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMG 843
                      CDHI DWVLGTPEGTWVSMG
Sbjct: 241 LSSALSAASSACDHIHDWVLGTPEGTWVSMG 271



 Score =  135 bits (341), Expect(2) = e-168
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = +2

Query: 905  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELSEEK 1084
            GTWVSMGVYSDGSYNVPAGLIYSFPVTC NGEWKIVQGLSIDEFSRKKLDLTA+ELSEEK
Sbjct: 265  GTWVSMGVYSDGSYNVPAGLIYSFPVTCQNGEWKIVQGLSIDEFSRKKLDLTADELSEEK 324

Query: 1085 ALAFSCLS 1108
            ALA+SCL+
Sbjct: 325  ALAYSCLT 332


>gb|AFK38114.1| unknown [Lotus japonicus]
          Length = 332

 Score =  478 bits (1231), Expect(2) = e-167
 Identities = 241/271 (88%), Positives = 250/271 (92%), Gaps = 4/271 (1%)
 Frame = +1

Query: 43  MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 222
           MAK+P RVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAE+LNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 223 AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 402
           AAFPLLKGVVATTDVVEACTGVN+AVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 403 AAANCKVLVVANPANTNALILKDFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 582
           AAANCKVLVVANPANTNALILK+FAPSIPE+NI+CLTRLDHNRALGQISERL+V VSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVSDVK 180

Query: 583 NVIIWGNHSSTQYPDVNHATV----GDKPVREFVADDEWLNGEFIKIVQQRGAAIIKARK 750
           NVIIWGNHSSTQYPDVNHATV    G+KPVRE V+DD WLNGEFI  VQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFITTVQQRGAAIIKARK 240

Query: 751 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMG 843
                      CDHIRDWVLGTPEGTWVSMG
Sbjct: 241 LSSALSAASGACDHIRDWVLGTPEGTWVSMG 271



 Score =  139 bits (349), Expect(2) = e-167
 Identities = 66/68 (97%), Positives = 68/68 (100%)
 Frame = +2

Query: 905  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELSEEK 1084
            GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEEL+EEK
Sbjct: 265  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEK 324

Query: 1085 ALAFSCLS 1108
            ALA+SCLS
Sbjct: 325  ALAYSCLS 332


>ref|NP_001236661.1| cytosolic malate dehydrogenase [Glycine max]
           gi|42521311|gb|AAS18241.1| cytosolic malate
           dehydrogenase [Glycine max]
          Length = 332

 Score =  481 bits (1238), Expect(2) = e-166
 Identities = 242/271 (89%), Positives = 250/271 (92%), Gaps = 4/271 (1%)
 Frame = +1

Query: 43  MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 222
           MAK+P RVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAE+LNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 223 AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 402
           AAFPLLKGVVATTDVVEACTGVN+AVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 403 AAANCKVLVVANPANTNALILKDFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 582
           AAANCKVLVVANPANTNALILK+FAPSIPEKNI+CLTRLDHNRALGQISERL VQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLTVQVSDVK 180

Query: 583 NVIIWGNHSSTQYPDVNHATV----GDKPVREFVADDEWLNGEFIKIVQQRGAAIIKARK 750
           NVIIWGNHSSTQYPDVNHATV    G+KPVRE +ADD WLNGEFI  VQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVATSAGEKPVRELIADDAWLNGEFITTVQQRGAAIIKARK 240

Query: 751 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMG 843
                      CDHIRDWVLGTP+GTWVSMG
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPQGTWVSMG 271



 Score =  132 bits (333), Expect(2) = e-166
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +2

Query: 905  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELSEEK 1084
            GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEW IVQGLSIDEFSRKKLDLTA+EL EEK
Sbjct: 265  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWAIVQGLSIDEFSRKKLDLTAKELFEEK 324

Query: 1085 ALAFSCLS 1108
            ALA+SCL+
Sbjct: 325  ALAYSCLN 332


>ref|XP_002312583.1| predicted protein [Populus trichocarpa] gi|118481649|gb|ABK92766.1|
           unknown [Populus trichocarpa]
           gi|222852403|gb|EEE89950.1| predicted protein [Populus
           trichocarpa]
          Length = 332

 Score =  477 bits (1227), Expect(2) = e-166
 Identities = 242/271 (89%), Positives = 248/271 (91%), Gaps = 4/271 (1%)
 Frame = +1

Query: 43  MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 222
           MAKEP RVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 223 AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 402
           AAFPLLKGVVATTDVVEACTGVN+AVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 403 AAANCKVLVVANPANTNALILKDFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 582
           AAANCKVLVVANPANTNALILK+FAPSI EKNITCLTRLDHNRALGQISERL+VQV DVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSISEKNITCLTRLDHNRALGQISERLSVQVCDVK 180

Query: 583 NVIIWGNHSSTQYPDVNHATV----GDKPVREFVADDEWLNGEFIKIVQQRGAAIIKARK 750
           NVIIWGNHSS+QYPDVNHATV    G+KPVRE V DDEWLN EFI  VQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVKTPAGEKPVRELVKDDEWLNAEFITTVQQRGAAIIKARK 240

Query: 751 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMG 843
                      CDHIRDWVLGTPEGTWVSMG
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMG 271



 Score =  137 bits (344), Expect(2) = e-166
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = +2

Query: 905  GTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELSEEK 1084
            GTWVSMGVYSDGSYNVPAGLIYSFPVTC NGEWKIVQGLSIDEFSRKKLDLTA+ELSEEK
Sbjct: 265  GTWVSMGVYSDGSYNVPAGLIYSFPVTCQNGEWKIVQGLSIDEFSRKKLDLTADELSEEK 324

Query: 1085 ALAFSCLS 1108
            ALA+SCLS
Sbjct: 325  ALAYSCLS 332


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