BLASTX nr result

ID: Panax21_contig00005377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005377
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY11272.1| GALK [Morus alba var. multicaulis]                     101   3e-19
ref|XP_002264528.1| PREDICTED: galacturonokinase [Vitis vinifera...    99   2e-18
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...    98   3e-18
ref|XP_004149677.1| PREDICTED: galacturonokinase-like [Cucumis s...    96   1e-17
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...    94   6e-17

>gb|AEY11272.1| GALK [Morus alba var. multicaulis]
          Length = 431

 Score =  101 bits (251), Expect = 3e-19
 Identities = 60/113 (53%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
 Frame = -1

Query: 815 Y*DLRLSLFDSISVFYAKVTDWLFPK-ETKEHKLIQPPRIQKNDKTETKNAYKILLAFFG 639
           Y  L+  + D  +V  +K    L    +TKEHKLI      KN+  E   AYKILLAF G
Sbjct: 194 YLGLKNGILDQSAVLLSKYGYLLCMNCKTKEHKLI------KNENIEPHTAYKILLAFSG 247

Query: 638 LK*ALTNNPGYNHRVVECQEAANVL-FSSGKGGVEPLLSNVEPKVYGAHKDMI 483
           LK ALTNNPGYNHRV ECQEAA +L  +SG G VEPLLS++EP+ Y  HK+ +
Sbjct: 248 LKHALTNNPGYNHRVSECQEAARILSHASGIGKVEPLLSDIEPEAYQRHKNKL 300


>ref|XP_002264528.1| PREDICTED: galacturonokinase [Vitis vinifera]
           gi|296090474|emb|CBI40670.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
 Frame = -1

Query: 815 Y*DLRLSLFDSISVFYAKVTDWLFPK-ETKEHKLIQPPRIQKNDKTETKNAYKILLAFFG 639
           Y  LR  + D  ++  +      F   +TKEHKL++P ++ KN + +   ++KILLA  G
Sbjct: 194 YLGLRNGILDQSAILLSSYGCLTFMNCKTKEHKLVRP-KLLKNQEADMLKSFKILLALSG 252

Query: 638 LK*ALTNNPGYNHRVVECQEAANVLF-SSGKGGVEPLLSNVEPKVYGAHK 492
           LK ALTNNPGYN+RV EC+EAA VL  +SG   +EPLLSNVEP+ Y AHK
Sbjct: 253 LKHALTNNPGYNNRVAECEEAARVLLHASGNDKLEPLLSNVEPEAYEAHK 302


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 64/155 (41%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
 Frame = -3

Query: 435 EEEQVRNRVMYDLLYVNPSHAWAPTILSYYNFFYQMPPDQRYPWPIDTNARLVLWFSLFL 256
           EEEQ+RN VM DLLYVN +H  A  ILSYY+   Q+PP +R   PIDTNA          
Sbjct: 598 EEEQLRNSVMLDLLYVNRAHNLAAHILSYYHVCSQLPPHERCVQPIDTNA---------- 647

Query: 255 YSDFFYMLNWIYNFYLMQYCSGGMNGYIWLCERNKRRIIIPSPISGLQKITNNQVL*V-- 82
                               SGGMNGY+WLCERN    +I SPISGLQ I  NQVL +  
Sbjct: 648 --------------------SGGMNGYLWLCERNVFSSVISSPISGLQDIEYNQVLNITF 687

Query: 81  -----------PPSAIN*CKILMKFSAFWPFKVMF 10
                      PP  +   K ++K     PF V++
Sbjct: 688 LNPRRHDHIPKPPDGVVIPKKVLKAIDIKPFPVLW 722


>ref|XP_004149677.1| PREDICTED: galacturonokinase-like [Cucumis sativus]
           gi|449507367|ref|XP_004163011.1| PREDICTED:
           galacturonokinase-like [Cucumis sativus]
          Length = 437

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = -1

Query: 737 ETKEHKLIQPPRIQKNDKTETKNAYKILLAFFGLK*ALTNNPGYNHRVVECQEAANVLF- 561
           +TK+ KLI+P  ++ + K+E +  Y+ILLAF GLK ALTNNPGYNHRV ECQEAA +L  
Sbjct: 221 KTKDFKLIRPLDMESSLKSEKQKEYQILLAFSGLKQALTNNPGYNHRVAECQEAAKILLN 280

Query: 560 SSGKGGVEPLLSNVEPKVYGAHKDMI 483
           +SG   +EPLL NV+ + Y AHK  +
Sbjct: 281 ASGNSHMEPLLCNVDQEAYKAHKSQL 306


>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 53/114 (46%), Positives = 60/114 (52%)
 Frame = -3

Query: 432 EEQVRNRVMYDLLYVNPSHAWAPTILSYYNFFYQMPPDQRYPWPIDTNARLVLWFSLFLY 253
           EEQVRN VM+DLLYV+  H  A  I+ YY+F+   PP  R  WPID NA           
Sbjct: 593 EEQVRNSVMFDLLYVHAVHPLATQIIYYYHFYQSSPPLARVIWPIDINA----------- 641

Query: 252 SDFFYMLNWIYNFYLMQYCSGGMNGYIWLCERNKRRIIIPSPISGLQKITNNQV 91
                              SGGMNGY+WLCERN  R   PS ISGLQ I +NQV
Sbjct: 642 -------------------SGGMNGYLWLCERNGWRSEFPSSISGLQNIEHNQV 676


Top