BLASTX nr result
ID: Panax21_contig00005370
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00005370 (1967 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2... 322 e-132 ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi... 319 e-121 ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucum... 344 e-120 ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci... 344 e-119 ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis... 376 e-118 >ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1| predicted protein [Populus trichocarpa] Length = 1805 Score = 322 bits (825), Expect(3) = e-132 Identities = 206/450 (45%), Positives = 259/450 (57%), Gaps = 12/450 (2%) Frame = +1 Query: 337 ESEGRTAAKRSLVTGSLSRQPKQDLSKDDSKSGKAIGRTVGPFSTSDRDLPTHHPFEGRQ 516 ESE + + KR + S+ PKQD+ KDD+KSGK +GRT+ STSD+D+ H EGRQ Sbjct: 1323 ESELKVSTKRPV-----SKTPKQDVVKDDNKSGKGVGRTLSS-STSDKDIQVHLS-EGRQ 1375 Query: 517 GTTVNVISVLQGNGNXXXXXXXXXXXXXXXXDIHGSELKSESGAMKSSDLRFPSVKDDGN 696 G NV SVL N E K +SG K P +KD+ Sbjct: 1376 GGASNVSSVLTSN-----------------------ESKPDSGGNK------PMLKDEAT 1406 Query: 697 EVSDLQRQASSRPVQSPRHE--AASSKSNDKPHKRVSPAEELDRLSKRRKGEIDSRDLEA 870 EV+D+Q+ S R V SPRH+ A+SKS+DK KR SPAEE DRLSKR+KG+++ RDLE Sbjct: 1407 EVADVQKPPS-RLVHSPRHDNSVAASKSSDKLQKRASPAEEPDRLSKRQKGDVELRDLEG 1465 Query: 871 DVRFSDRERSIDPRVADKLHPADLEKTGSEDQ-----INRTMDRSKDKANXXXXXXXXXX 1035 +V+FS+RERS D R ADL+K G+++ +++ +DRSKDK N Sbjct: 1466 EVKFSERERSTDTR------SADLDKVGNDEHNLYRSVDKPLDRSKDKGNDRYDRDHRER 1519 Query: 1036 XXXXXKSRGDDNLLEKSRDRSMERYGTERSVDRLQERGGDRGSDRLTEKTKDERNKDDRS 1215 KSRGDD+L ++SRD+SMERYG E SV+R Q+R DR DRL +K KD DRS Sbjct: 1520 SERPDKSRGDDSLADRSRDKSMERYGRELSVERGQDRVADRSFDRLADKAKD-----DRS 1574 Query: 1216 KSRYNETSQEKSHADDRFHGQSXXXXXXXXAHIVPQSVNAXXXXXXXXXXLGTARHTQRL 1395 K RYN+TS EKS DDRFHGQ+ H+VPQSV + GT RH QRL Sbjct: 1575 KLRYNDTSAEKSQVDDRFHGQNLPPPPPLPPHMVPQSVTSGRRDEDADRRFGTTRHVQRL 1634 Query: 1396 SPRHDDXXXXXXXXXNILISQXXXXXXXXXXXXXXXXXXXXGFSVKVE----EREREKAN 1563 SPRHD+ N L+SQ G S+KVE EREREK N Sbjct: 1635 SPRHDE-KERRRSEENSLVSQDDAKRRKEDDVRERKREEREGLSIKVEEREREREREKTN 1693 Query: 1564 LLKEDLDASAASKRRKLKREHLPV-EAGEY 1650 L KE++D+SA +KRRKLKR+HLP EAGEY Sbjct: 1694 LPKEEMDSSATAKRRKLKRDHLPTGEAGEY 1723 Score = 115 bits (288), Expect(3) = e-132 Identities = 52/75 (69%), Positives = 59/75 (78%) Frame = +2 Query: 1733 PPLTINLSQSYDGRERGDRKAAMPQRPGYIEEPVLRNHGKEAANKMTRRDTDQMYDREWD 1912 PPL I +S SYDGRERGDRK AM QR Y+EEP++R HGK+ KM RRDTD MYDREWD Sbjct: 1731 PPLGIGISHSYDGRERGDRKGAMNQRASYLEEPLMRIHGKDVVGKMGRRDTDPMYDREWD 1790 Query: 1913 DEKRPRVEPKRRHRK 1957 ++KR R E KRRHRK Sbjct: 1791 EDKRQRAEQKRRHRK 1805 Score = 85.5 bits (210), Expect(3) = e-132 Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Frame = +2 Query: 8 PSVSSKSLSGNIAPSQNGSGVNLSLNESTGGR-IVAAAQHSDLGNSFKDPVLRTKLVDGR 184 PSV+SKSLSGN+A +QN S +N+S E GR +V +QH D GNS +DP+ R K DGR Sbjct: 1210 PSVASKSLSGNVAAAQNSSALNVSQGEPADGRALVTGSQHGDPGNSNRDPISRAKHADGR 1269 Query: 185 LERAEIASH-KSDTGHVKPKGGS 250 +R E SH KSD GH K KG S Sbjct: 1270 SDRTENISHLKSDLGHQKSKGAS 1292 >ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi|355525030|gb|AET05484.1| THO complex subunit [Medicago truncatula] Length = 2048 Score = 319 bits (818), Expect(3) = e-121 Identities = 204/441 (46%), Positives = 260/441 (58%), Gaps = 5/441 (1%) Frame = +1 Query: 343 EGRTAAK-RSLVTGSLSRQPKQDLSKDDSKSGKAIGRTVGPFSTSDRDLPTHHPFEGRQG 519 E R + K RS+ TGSL + KQD K+D +SGK + RT G S+SD+DL TH +GR Sbjct: 1550 ESRPSVKQRSVATGSLLKPSKQDPLKEDGRSGKTVTRTSGS-SSSDKDLQTHAS-DGRH- 1606 Query: 520 TTVNVISVLQGNGNXXXXXXXXXXXXXXXX-DIHGSELKSESGAMKSSDLRFPSVKDDGN 696 T N+ S NGN D G+E K+E GA K F VKDD N Sbjct: 1607 TGTNISSSFSANGNSVSGSAKGLAQAATTAFDGSGNESKAEVGAAK-----FSMVKDDVN 1661 Query: 697 EVSDLQRQASSRPVQSPRHE-AASSKSNDKPHKRVSPAEELDRLSKRRKGEIDSRDLEAD 873 E +D R +SSR V SPRHE A+SKS+DK KR +ELDRL KRRKG+ID RDLE + Sbjct: 1662 EFADFTRGSSSRVVHSPRHENTATSKSSDKIQKRAGSVDELDRLGKRRKGDIDLRDLEGE 1721 Query: 874 VRFSDRERSIDPRVAD-KLHPADLEKTGSEDQINRTMDRSKDKANXXXXXXXXXXXXXXX 1050 VRFS+RE+ +DPR+AD K+ P +L + D +T++R K+K Sbjct: 1722 VRFSEREKLMDPRLADDKVGPDELGVYRTGD---KTLERPKEKGTDRYEREHRERLDRLD 1778 Query: 1051 KSRGDDNLLEKSRDRSMERYGTERSVDRLQERGGDRGSDRLTEKTKDERNKDDRSKSRYN 1230 KSRGDD ++EK RDRS+ERYG ERSV+R+QERG +R +RL +K KD+R+KDDR+K RYN Sbjct: 1779 KSRGDDFVVEKPRDRSIERYGRERSVERVQERGSERSFNRLPDKAKDDRSKDDRNKLRYN 1838 Query: 1231 ETSQEKSHADDRFHGQSXXXXXXXXAHIVPQSVNAXXXXXXXXXXLGTARHTQRLSPRHD 1410 + + EKSHA+ RFHGQS ++VPQS+ A G RH+QRLSPRH+ Sbjct: 1839 DATIEKSHAEGRFHGQSLPPPPPLPPNMVPQSLGAGRRDEDADRRYGATRHSQRLSPRHE 1898 Query: 1411 DXXXXXXXXXNILISQXXXXXXXXXXXXXXXXXXXXGFSVKVEEREREKANLLKEDLDAS 1590 + IL +KVEEREREKA++LKE+ D + Sbjct: 1899 EKELRRSEETVILQDDPKRRKEDDFRDRKRE-------EMKVEEREREKASILKEE-DLN 1950 Query: 1591 AASKRRKLKREHLP-VEAGEY 1650 AASKRRKLKREHLP +E GEY Sbjct: 1951 AASKRRKLKREHLPTMEPGEY 1971 Score = 96.3 bits (238), Expect(3) = e-121 Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 1/76 (1%) Frame = +2 Query: 1733 PPLT-INLSQSYDGRERGDRKAAMPQRPGYIEEPVLRNHGKEAANKMTRRDTDQMYDREW 1909 PPL+ I +SQ+YDGR DRK M Q YI+EP LR HGKE A+K+ RR++D +YDREW Sbjct: 1976 PPLSGIGMSQAYDGR---DRKGPMIQHASYIDEPSLRIHGKEVASKLNRRESDPLYDREW 2032 Query: 1910 DDEKRPRVEPKRRHRK 1957 DDEKR R + KRRHRK Sbjct: 2033 DDEKRQRADQKRRHRK 2048 Score = 71.2 bits (173), Expect(3) = e-121 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 1/90 (1%) Frame = +2 Query: 2 PVPSVSSKSLSGNIAPSQNGSGVNLSLNESTGGRIVAAAQHSDLGNSFKDPVLRTKLVDG 181 P PS++ KS +GN A Q+G G+ S ES G+ H D GN+ KD ++TK DG Sbjct: 1427 PAPSMT-KSAAGNSAAVQSGIGLQFSQTESASGK------HLDSGNTVKDQTVKTKTADG 1479 Query: 182 RLERAE-IASHKSDTGHVKPKGGSLVNGSD 268 + ER E + + KSD+GH K KG S+VNG D Sbjct: 1480 KSERTESLTATKSDSGHGKLKGSSMVNGVD 1509 >ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus] gi|449506883|ref|XP_004162874.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus] Length = 1887 Score = 344 bits (883), Expect(2) = e-120 Identities = 210/448 (46%), Positives = 268/448 (59%), Gaps = 10/448 (2%) Frame = +1 Query: 337 ESEGRTAAKRSLVTGSLSRQPKQDLSKDDSKSGKAIGRTVGPFSTSDRDLPTHHPFEGRQ 516 ESE R + KRS SL++ PKQD++KD+ +SGKA + G STS+R+LP H GR Sbjct: 1372 ESELRGSTKRSGPVTSLNKAPKQDITKDEIRSGKAASKNPGS-STSERELPVHATDGGRH 1430 Query: 517 GTTVNVISVLQGNGNXXXXXXXXXXXXXXXXDIHGSELKSESGAMKSSDLRFPSVKDDGN 696 G N S++ NGN D H E K+ESG ++SD R SVKDDG Sbjct: 1431 GGPSNSPSIMS-NGNTQNSLTKGSSLTVKASDGHTIESKAESGVGRTSDGRVSSVKDDGP 1489 Query: 697 EVSDLQRQASSRPVQSPRHE--AASSKSNDKPHKRVSPAEELDRLSKRRKGEIDSRDLEA 870 E D+ R +SSR SPRH+ A+ S+S+DK KR SPAEE DR KRRKG+ + RD++ Sbjct: 1490 EALDVSRSSSSRLGHSPRHDNSASGSRSSDKLQKRASPAEEPDRQGKRRKGDGEIRDVDG 1549 Query: 871 DVRFSDRERSIDPRVADKLHPADLEKTGSEDQ-----INRTMDRSKDKANXXXXXXXXXX 1035 D R SD++RS+DPR D +K G E+Q +++ +DR+KDK N Sbjct: 1550 DFRISDKDRSMDPR------SIDADKIGMEEQSGYRGLDKPLDRTKDKVNERYDRDYRDR 1603 Query: 1036 XXXXXKSRGDDNLLEKSRDRSMERYGTERSVDRLQERGGDRGSDRLTEKTKDERNKDDRS 1215 KSRGDD +E++RDRS+ERYG ERSV++++ R SDR EK+KDERNKDDRS Sbjct: 1604 AERPEKSRGDDPQVERTRDRSIERYGRERSVEKVE-----RVSDRYPEKSKDERNKDDRS 1658 Query: 1216 KSRYNETSQEKSHADDRFHGQSXXXXXXXXAHIVPQSVNAXXXXXXXXXXLGTARHTQRL 1395 K RY++++ +KSH DDRFHGQS H+VPQSVN+ GTARH QRL Sbjct: 1659 KLRYSDSTVDKSHTDDRFHGQSLPPPPPLPPHLVPQSVNSGRREEDADRRFGTARHAQRL 1718 Query: 1396 SPRHDDXXXXXXXXXNILISQXXXXXXXXXXXXXXXXXXXXGFSVKVE--EREREKANLL 1569 SPRH++ N++ G S+KV+ EREREKANLL Sbjct: 1719 SPRHEE-KERRRSEENLISQDDAKRRREEEFRERKREERDVGMSLKVDDREREREKANLL 1777 Query: 1570 KEDLDASAASKRRKLKREHLP-VEAGEY 1650 KED+DASAASKRRKLKREHL VEAGEY Sbjct: 1778 KEDMDASAASKRRKLKREHLSLVEAGEY 1805 Score = 115 bits (289), Expect(2) = e-120 Identities = 52/75 (69%), Positives = 60/75 (80%) Frame = +2 Query: 1733 PPLTINLSQSYDGRERGDRKAAMPQRPGYIEEPVLRNHGKEAANKMTRRDTDQMYDREWD 1912 PP+ +SQSYDGRERGDRK M QRPGY+++P LR HGKE NKMTRR+ D MY+REWD Sbjct: 1813 PPMGGGVSQSYDGRERGDRKGVMMQRPGYLDDPGLRIHGKEVVNKMTRREADLMYEREWD 1872 Query: 1913 DEKRPRVEPKRRHRK 1957 DEKR R + KRRHRK Sbjct: 1873 DEKRMRADQKRRHRK 1887 >ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max] Length = 1829 Score = 344 bits (882), Expect(3) = e-119 Identities = 210/441 (47%), Positives = 260/441 (58%), Gaps = 4/441 (0%) Frame = +1 Query: 340 SEGRTAAKRSLVTGSLSRQPKQDLSKDDSKSGKAIGRTVGPFSTSDRDLPTHHPFEGRQG 519 +E RT+AKRS+ SL++ KQD K+D +SGK + RT G S SD+DL TH EGR Sbjct: 1360 TELRTSAKRSVPASSLAKPSKQDPVKEDGRSGKPVARTSGSLS-SDKDLQTH-ALEGRHT 1417 Query: 520 TTVNVISVLQGNGNXXXXXXXXXXXXXXXXDIHGSELKSESGAMKSSDLRFPSVKDDGNE 699 T N+ L G GN E K+E G KSSD+R VKDDGN+ Sbjct: 1418 GTTNIS--LDGPGN---------------------ESKAEVGVAKSSDIRASMVKDDGND 1454 Query: 700 VSDLQRQASSRPVQSPRHE--AASSKSNDKPHKRVSPAEELDRLSKRRKGEIDSRDLEAD 873 ++D R +SSR V SPRHE +SKSND+ KR S EE DRL KRRKG+++ RD E + Sbjct: 1455 ITDNPRGSSSRIVHSPRHENTVVTSKSNDRVQKRASSVEEPDRLGKRRKGDVELRDFETE 1514 Query: 874 VRFSDRERSIDPRVAD-KLHPADLEKTGSEDQINRTMDRSKDKANXXXXXXXXXXXXXXX 1050 +RFS+RE+ +DPR AD KL P E+ G ++ ++R+KDK N Sbjct: 1515 LRFSEREKMMDPRFADDKLGP---EEHGLYRASDKPLERTKDKGNERYERDHRERMDRLD 1571 Query: 1051 KSRGDDNLLEKSRDRSMERYGTERSVDRLQERGGDRGSDRLTEKTKDERNKDDRSKSRYN 1230 KSRGDD + EK RDRS+ERYG ERSV+R+QERG DR +RL EK KDERNKDDR+K RYN Sbjct: 1572 KSRGDDFVAEKPRDRSIERYGRERSVERMQERGSDRSFNRLPEKAKDERNKDDRNKLRYN 1631 Query: 1231 ETSQEKSHADDRFHGQSXXXXXXXXAHIVPQSVNAXXXXXXXXXXLGTARHTQRLSPRHD 1410 + S EKSH DDRFHGQS ++VPQSV A G RH+QRLSPRH+ Sbjct: 1632 DASAEKSHGDDRFHGQSLPPPPPLPPNVVPQSVGAGRRDEDVDRRYGATRHSQRLSPRHE 1691 Query: 1411 DXXXXXXXXXNILISQXXXXXXXXXXXXXXXXXXXXGFSVKVEEREREKANLLKEDLDAS 1590 + ++SQ V+ EREREKAN+LKE+LD + Sbjct: 1692 E--KERRWSEETVVSQDDAKRRKEDDFRDRKREE---IKVEEREREREKANILKEELDLN 1746 Query: 1591 AASKRRKLKREHLPV-EAGEY 1650 AASKRRKLKREHLP E GEY Sbjct: 1747 AASKRRKLKREHLPTDEPGEY 1767 Score = 72.4 bits (176), Expect(3) = e-119 Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 1/90 (1%) Frame = +2 Query: 2 PVPSVSSKSLSGNIAPSQNGSGVNLSLNESTGGRIVAAAQHSDLGNSFKDPVLRTKLVDG 181 P PS++ KS +GN A Q+G +N+S ES G+ H D GN+ KD +RTK VDG Sbjct: 1238 PSPSMT-KSSAGNSATVQSGINLNVSQTESVSGK------HVDSGNTVKDQAIRTKTVDG 1290 Query: 182 RLERAE-IASHKSDTGHVKPKGGSLVNGSD 268 + ER E I KSD GH+K K S+VNG D Sbjct: 1291 KSERIESITVTKSDAGHIKLKSSSMVNGLD 1320 Score = 61.6 bits (148), Expect(3) = e-119 Identities = 27/43 (62%), Positives = 34/43 (79%) Frame = +2 Query: 1760 SYDGRERGDRKAAMPQRPGYIEEPVLRNHGKEAANKMTRRDTD 1888 +YDGR+RGDRK + Q P YI+E LR HGKEAA+K+ RRD+D Sbjct: 1784 AYDGRDRGDRKGPIMQHPSYIDESSLRIHGKEAASKLNRRDSD 1826 >ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera] Length = 1849 Score = 376 bits (965), Expect(2) = e-118 Identities = 224/445 (50%), Positives = 269/445 (60%), Gaps = 7/445 (1%) Frame = +1 Query: 337 ESEGRTAAKRSLVTGSLSRQPKQDLSKDDSKSGKAIGRTVGPFSTSDRDLPTHHPFEGRQ 516 ESE R KRSL +GSL++QPK D++KDDSKSGK +GRT G STSDRDLP H EGRQ Sbjct: 1375 ESELRATGKRSLPSGSLTKQPKLDVAKDDSKSGKGVGRTSGS-STSDRDLPAHQ-LEGRQ 1432 Query: 517 GTTVNVISVLQGNGNXXXXXXXXXXXXXXXXDIHGSELKSESGAMKSSDLRFPSVKDDGN 696 NV S +G+ VKDDGN Sbjct: 1433 SGVTNVSSAGTADGSV--------------------------------------VKDDGN 1454 Query: 697 EVSDLQRQASSRPVQSPRHE-AASSKSNDKPHKRVSPAEELDRLSKRRKGEIDSRDLEAD 873 EVSD R SSRP+ SPRH+ +A+ KS DK KR SPAEE +R++KRRKG+ + RD E + Sbjct: 1455 EVSD--RAPSSRPIHSPRHDNSATIKSGDKQQKRTSPAEEPERVNKRRKGDTEVRDFEGE 1512 Query: 874 VRFSDRERSIDPRVADKLHPADLEKTGSEDQ-----INRTMDRSKDKANXXXXXXXXXXX 1038 VRFSD+ERS+DPR+ DK H DL+K+G+++Q ++ DR KDK + Sbjct: 1513 VRFSDKERSMDPRL-DKSHAVDLDKSGTDEQGISRATDKPSDRLKDKGSERYERDHRERL 1571 Query: 1039 XXXXKSRGDDNLLEKSRDRSMERYGTERSVDRLQERGGDRGSDRLTEKTKDERNKDDRSK 1218 KSRGD+ + EKSRDRSMER+G ERSV+R+QER +R DRLT+K KDERNKDDR K Sbjct: 1572 ERPDKSRGDEMIAEKSRDRSMERHGRERSVERVQERSSERSFDRLTDKVKDERNKDDRGK 1631 Query: 1219 SRYNETSQEKSHADDRFHGQSXXXXXXXXAHIVPQSVNAXXXXXXXXXXLGTARHTQRLS 1398 RY+ETS EKSHADDRFHGQS H+VPQSV A GTARH QRLS Sbjct: 1632 MRYSETSVEKSHADDRFHGQSLPPPPPLPPHMVPQSVTASRRDEDADRRFGTARHAQRLS 1691 Query: 1399 PRHDDXXXXXXXXXNILISQXXXXXXXXXXXXXXXXXXXXGFSVKVEEREREKANLLKED 1578 PRH++ ISQ G S+KVE+REREKA+LLKED Sbjct: 1692 PRHEEKERRRSEE----ISQDDAKRRREDDIRERKREEREGLSIKVEDREREKASLLKED 1747 Query: 1579 LDASAASKRRKLKREHLPV-EAGEY 1650 +D SAASKRRKLKREH+P EAGEY Sbjct: 1748 MDPSAASKRRKLKREHMPSGEAGEY 1772 Score = 79.0 bits (193), Expect(2) = e-118 Identities = 36/53 (67%), Positives = 41/53 (77%) Frame = +2 Query: 1733 PPLTINLSQSYDGRERGDRKAAMPQRPGYIEEPVLRNHGKEAANKMTRRDTDQ 1891 PP I++SQ+YDGRERGDRK AM QR GY++EP LR HGKE KM RRD DQ Sbjct: 1780 PPPAISMSQAYDGRERGDRKGAMVQRAGYLDEPGLRIHGKEVTGKMARRDADQ 1832 Score = 101 bits (252), Expect = 6e-19 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 2/91 (2%) Frame = +2 Query: 2 PVPSVSSKSLSGNIAPSQNGSGVNLSLNESTGGRIVAA-AQHSDLGNSFKDPVLRTKLVD 178 P PS++SKSL+GN+ NGSG+N+ NES+GGR VA+ QH D GNS K+ VLR K VD Sbjct: 1239 PAPSLASKSLAGNLVAVPNGSGLNIFQNESSGGRTVASGTQHLDAGNSVKEQVLRAKTVD 1298 Query: 179 GRLERAE-IASHKSDTGHVKPKGGSLVNGSD 268 GRLER E ++ KSD H K KGGS VNGSD Sbjct: 1299 GRLERTESVSLVKSDPVHAKVKGGSSVNGSD 1329