BLASTX nr result

ID: Panax21_contig00005362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005362
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15766.3| unnamed protein product [Vitis vinifera]              335   9e-90
ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 ...   335   9e-90
emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]   324   3e-86
ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-...   310   5e-82
ref|XP_004142778.1| PREDICTED: pre-rRNA-processing protein ESF2-...   310   5e-82

>emb|CBI15766.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  335 bits (860), Expect = 9e-90
 Identities = 165/222 (74%), Positives = 189/222 (85%)
 Frame = +3

Query: 228 QLMKEAEKADKRGVCYLSHIPPKMDPLKLRQLLSQYGEIQRIYLTPENPDARLHRKRAGG 407
           +L+KEA KADKRGVCYLS IPP MD +KLR +LSQYGEIQRIYL PE+P  ++HRKRAGG
Sbjct: 123 RLLKEASKADKRGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGG 182

Query: 408 YRGQKFSEGWVEFTKKRVAKKVAETINGEQIGGRKRSIFYYDRWNIKYLSKFKWDDLTEE 587
           +RGQ FSEGWVEFTKK VAK+VA+ +NGEQIGGRKRS FYYD WNIKYLSKFKWDDLTEE
Sbjct: 183 FRGQVFSEGWVEFTKKTVAKRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEE 242

Query: 588 IAYKSATREQKLALDMSAAKRERDFYLSKVDQSHALKHIDERLQKKQKVLQESGATSQLP 767
           IAYK+A REQKLAL++SAAKRERDFYLSKVD+S AL  I+ERL+KKQKV Q++G  ++ P
Sbjct: 243 IAYKNAIREQKLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAP 302

Query: 768 DNQKAQKVMRQFTQTRPVADKAGERNRPLSKDILAGVFGGSS 893
            N +  KV+RQF Q  P+ADKA E    LSKDILAGVFGGSS
Sbjct: 303 ANDQGPKVIRQFPQKPPLADKAAESKPRLSKDILAGVFGGSS 344


>ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 [Vitis vinifera]
          Length = 257

 Score =  335 bits (860), Expect = 9e-90
 Identities = 165/222 (74%), Positives = 189/222 (85%)
 Frame = +3

Query: 228 QLMKEAEKADKRGVCYLSHIPPKMDPLKLRQLLSQYGEIQRIYLTPENPDARLHRKRAGG 407
           +L+KEA KADKRGVCYLS IPP MD +KLR +LSQYGEIQRIYL PE+P  ++HRKRAGG
Sbjct: 36  RLLKEASKADKRGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGG 95

Query: 408 YRGQKFSEGWVEFTKKRVAKKVAETINGEQIGGRKRSIFYYDRWNIKYLSKFKWDDLTEE 587
           +RGQ FSEGWVEFTKK VAK+VA+ +NGEQIGGRKRS FYYD WNIKYLSKFKWDDLTEE
Sbjct: 96  FRGQVFSEGWVEFTKKTVAKRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEE 155

Query: 588 IAYKSATREQKLALDMSAAKRERDFYLSKVDQSHALKHIDERLQKKQKVLQESGATSQLP 767
           IAYK+A REQKLAL++SAAKRERDFYLSKVD+S AL  I+ERL+KKQKV Q++G  ++ P
Sbjct: 156 IAYKNAIREQKLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAP 215

Query: 768 DNQKAQKVMRQFTQTRPVADKAGERNRPLSKDILAGVFGGSS 893
            N +  KV+RQF Q  P+ADKA E    LSKDILAGVFGGSS
Sbjct: 216 ANDQGPKVIRQFPQKPPLADKAAESKPRLSKDILAGVFGGSS 257


>emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]
          Length = 486

 Score =  324 bits (830), Expect = 3e-86
 Identities = 159/216 (73%), Positives = 183/216 (84%)
 Frame = +3

Query: 228 QLMKEAEKADKRGVCYLSHIPPKMDPLKLRQLLSQYGEIQRIYLTPENPDARLHRKRAGG 407
           +L+KEA KADKRGVCYLS IPP MD +KLR +LSQYGEIQRIYL PE+P  ++HRKRAGG
Sbjct: 36  RLLKEASKADKRGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGG 95

Query: 408 YRGQKFSEGWVEFTKKRVAKKVAETINGEQIGGRKRSIFYYDRWNIKYLSKFKWDDLTEE 587
           +RGQ FSEGWVEFTKK VAK+VA+ +NGEQIGGRKRS FYYD WNIKYLSKFKWDDLTEE
Sbjct: 96  FRGQVFSEGWVEFTKKTVAKRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEE 155

Query: 588 IAYKSATREQKLALDMSAAKRERDFYLSKVDQSHALKHIDERLQKKQKVLQESGATSQLP 767
           IAYK+A REQKLAL++SAAKRERDFYLSKVD+S AL  I+ERL+KKQKV Q++G  ++ P
Sbjct: 156 IAYKNAIREQKLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAP 215

Query: 768 DNQKAQKVMRQFTQTRPVADKAGERNRPLSKDILAG 875
            N +  KV+RQF Q  P+ADKA E    LSKDILAG
Sbjct: 216 ANDQGPKVIRQFPQKPPLADKAAESKPRLSKDILAG 251


>ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-like, partial [Cucumis
           sativus]
          Length = 326

 Score =  310 bits (793), Expect = 5e-82
 Identities = 153/221 (69%), Positives = 181/221 (81%)
 Frame = +3

Query: 228 QLMKEAEKADKRGVCYLSHIPPKMDPLKLRQLLSQYGEIQRIYLTPENPDARLHRKRAGG 407
           QL+KEA  AD RG+CYLS +PP MDPLKLRQ+LSQ+GEIQRIYL PE+  +++ RKRAGG
Sbjct: 106 QLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGG 165

Query: 408 YRGQKFSEGWVEFTKKRVAKKVAETINGEQIGGRKRSIFYYDRWNIKYLSKFKWDDLTEE 587
           +RGQ FSEGWVEFT KRVAK+VA  +NGE IGGRKRS FYYD WNIKYLSKFKWDDLTEE
Sbjct: 166 FRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEE 225

Query: 588 IAYKSATREQKLALDMSAAKRERDFYLSKVDQSHALKHIDERLQKKQKVLQESGATSQLP 767
            AYK A REQKLAL++SAAKRERDFYL+KVD+S AL  I+ERL+KKQK+ ++S   S L 
Sbjct: 226 TAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLD 285

Query: 768 DNQKAQKVMRQFTQTRPVADKAGERNRPLSKDILAGVFGGS 890
           D+QK  K++R F QT+PVAD A +    LS ++LAGVFG S
Sbjct: 286 DSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS 326


>ref|XP_004142778.1| PREDICTED: pre-rRNA-processing protein ESF2-like [Cucumis sativus]
          Length = 380

 Score =  310 bits (793), Expect = 5e-82
 Identities = 153/221 (69%), Positives = 181/221 (81%)
 Frame = +3

Query: 228 QLMKEAEKADKRGVCYLSHIPPKMDPLKLRQLLSQYGEIQRIYLTPENPDARLHRKRAGG 407
           QL+KEA  AD RG+CYLS +PP MDPLKLRQ+LSQ+GEIQRIYL PE+  +++ RKRAGG
Sbjct: 160 QLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGG 219

Query: 408 YRGQKFSEGWVEFTKKRVAKKVAETINGEQIGGRKRSIFYYDRWNIKYLSKFKWDDLTEE 587
           +RGQ FSEGWVEFT KRVAK+VA  +NGE IGGRKRS FYYD WNIKYLSKFKWDDLTEE
Sbjct: 220 FRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEE 279

Query: 588 IAYKSATREQKLALDMSAAKRERDFYLSKVDQSHALKHIDERLQKKQKVLQESGATSQLP 767
            AYK A REQKLAL++SAAKRERDFYL+KVD+S AL  I+ERL+KKQK+ ++S   S L 
Sbjct: 280 TAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLD 339

Query: 768 DNQKAQKVMRQFTQTRPVADKAGERNRPLSKDILAGVFGGS 890
           D+QK  K++R F QT+PVAD A +    LS ++LAGVFG S
Sbjct: 340 DSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS 380


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