BLASTX nr result

ID: Panax21_contig00005354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005354
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [...   126   2e-27
gb|ACU24631.1| unknown [Glycine max]                                  126   2e-27
ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [...   125   3e-27
ref|XP_002532732.1| RNA binding protein, putative [Ricinus commu...   125   4e-27
emb|CBI23570.3| unnamed protein product [Vitis vinifera]              124   1e-26

>ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 462

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/86 (69%), Positives = 71/86 (82%)
 Frame = -1

Query: 259 GLAFVQQYYHILHHSPALLHRFYQDISKLGRPENDGSMSITTTMTDINEKVLSLNYGEFR 80
           G AFV QYYH+LH SP L+HRFYQD+SKLGRPE +G M ITTTM DIN+K+LSL YGE  
Sbjct: 19  GNAFVDQYYHMLHESPELVHRFYQDVSKLGRPEQNGIMGITTTMLDINKKILSLGYGELS 78

Query: 79  PEIMSVDAQESFNMGVHVLVTGYLTG 2
            EI+SVDAQES++ GV VLVTG++ G
Sbjct: 79  AEIVSVDAQESYDGGVIVLVTGFMIG 104


>gb|ACU24631.1| unknown [Glycine max]
          Length = 442

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/86 (69%), Positives = 71/86 (82%)
 Frame = -1

Query: 259 GLAFVQQYYHILHHSPALLHRFYQDISKLGRPENDGSMSITTTMTDINEKVLSLNYGEFR 80
           G AFV QYYH+LH SP L+HRFYQD+SKLGRPE +G M ITTTM DIN+K+LSL YGE  
Sbjct: 19  GNAFVDQYYHMLHESPELVHRFYQDVSKLGRPEQNGIMGITTTMLDINKKILSLGYGELS 78

Query: 79  PEIMSVDAQESFNMGVHVLVTGYLTG 2
            EI+SVDAQES++ GV VLVTG++ G
Sbjct: 79  AEIVSVDAQESYDGGVIVLVTGFMIG 104


>ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 466

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/86 (69%), Positives = 70/86 (81%)
 Frame = -1

Query: 259 GLAFVQQYYHILHHSPALLHRFYQDISKLGRPENDGSMSITTTMTDINEKVLSLNYGEFR 80
           G AFV QYYH+LH SP L+HRFYQD+SKLGRPE +G M ITTTM DIN+K+LSL YGE  
Sbjct: 19  GNAFVDQYYHMLHESPELVHRFYQDVSKLGRPEQNGIMGITTTMFDINKKILSLGYGELS 78

Query: 79  PEIMSVDAQESFNMGVHVLVTGYLTG 2
            EI+SVDAQES+  GV VLVTG++ G
Sbjct: 79  AEIVSVDAQESYGGGVIVLVTGFMIG 104


>ref|XP_002532732.1| RNA binding protein, putative [Ricinus communis]
           gi|223527509|gb|EEF29634.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 478

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/86 (72%), Positives = 70/86 (81%)
 Frame = -1

Query: 259 GLAFVQQYYHILHHSPALLHRFYQDISKLGRPENDGSMSITTTMTDINEKVLSLNYGEFR 80
           G AFV QYY ILH SP L+HRFYQD+SKLGRP++ G MS TTTM  INEK+LSL YG+FR
Sbjct: 20  GNAFVHQYYLILHQSPELVHRFYQDVSKLGRPDDGGIMSTTTTMHAINEKILSLGYGKFR 79

Query: 79  PEIMSVDAQESFNMGVHVLVTGYLTG 2
            EI +VD+QESFN GV VLVTGYL G
Sbjct: 80  AEISTVDSQESFNGGVLVLVTGYLNG 105


>emb|CBI23570.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/86 (73%), Positives = 68/86 (79%)
 Frame = -1

Query: 259 GLAFVQQYYHILHHSPALLHRFYQDISKLGRPENDGSMSITTTMTDINEKVLSLNYGEFR 80
           G AFV QYYHILH SP L+ RFYQDISKLGR E +G M +TTTM  INEK+LSLNYG+  
Sbjct: 17  GNAFVHQYYHILHQSPELVFRFYQDISKLGRLEENGIMGVTTTMEAINEKILSLNYGDLI 76

Query: 79  PEIMSVDAQESFNMGVHVLVTGYLTG 2
            EI SVDAQESF  GV VLVTGYLTG
Sbjct: 77  AEIKSVDAQESFGGGVLVLVTGYLTG 102


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