BLASTX nr result

ID: Panax21_contig00005344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005344
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago t...   187   1e-45
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   186   1e-45
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   186   2e-45
ref|XP_002309059.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   184   5e-45

>ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago truncatula]
            gi|355498141|gb|AES79344.1| E3 ubiquitin-protein ligase
            ubr1 [Medicago truncatula]
          Length = 2105

 Score =  187 bits (474), Expect = 1e-45
 Identities = 90/112 (80%), Positives = 99/112 (88%)
 Frame = -3

Query: 337  YEPVLMQEMLSLIIQIVKERRICGITPAECLQRELIYKLSTGDATHSQLVKSLPRDLSKV 158
            YEPVL+QEML+LIIQIVKERR CG+  AE L+RELIYKLS GDATHSQLVKSLPRDLSK 
Sbjct: 796  YEPVLVQEMLTLIIQIVKERRFCGLNTAESLKRELIYKLSIGDATHSQLVKSLPRDLSKF 855

Query: 157  GEFQEILDTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEQR 2
             + Q++LDTVAEYSNPSG NQGMY LR   WKELDLYHPRWNS+DLQVAE+R
Sbjct: 856  DKLQDVLDTVAEYSNPSGFNQGMYSLRWLLWKELDLYHPRWNSKDLQVAEER 907


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score =  186 bits (473), Expect = 1e-45
 Identities = 92/121 (76%), Positives = 104/121 (85%), Gaps = 2/121 (1%)
 Frame = -3

Query: 358  CLTLGQG--YEPVLMQEMLSLIIQIVKERRICGITPAECLQRELIYKLSTGDATHSQLVK 185
            CL L +   YEPVL+QEML+LIIQIVKERR  G+T AECL+RELIYKLS GDATHS LVK
Sbjct: 806  CLNLERSSEYEPVLVQEMLTLIIQIVKERRFSGLTTAECLKRELIYKLSIGDATHSHLVK 865

Query: 184  SLPRDLSKVGEFQEILDTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEQ 5
            SLPRDLSK  + Q+ILDTVA YSNPSG NQGM+ LR ++WKELDLYHPRWNS+DLQVAE+
Sbjct: 866  SLPRDLSKFEQLQDILDTVAVYSNPSGFNQGMFSLRWSFWKELDLYHPRWNSKDLQVAEE 925

Query: 4    R 2
            R
Sbjct: 926  R 926


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score =  186 bits (472), Expect = 2e-45
 Identities = 90/112 (80%), Positives = 100/112 (89%)
 Frame = -3

Query: 337  YEPVLMQEMLSLIIQIVKERRICGITPAECLQRELIYKLSTGDATHSQLVKSLPRDLSKV 158
            YEPVL+QEML+LIIQIVKERR  G+T AECL+RELIYKLS GDATHSQLVKSLPRDLSK 
Sbjct: 815  YEPVLVQEMLTLIIQIVKERRFSGLTTAECLKRELIYKLSIGDATHSQLVKSLPRDLSKF 874

Query: 157  GEFQEILDTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEQR 2
             + Q+IL+TVA YSNPSG NQGMY LR  +WKELDLYHPRWNS+DLQVAE+R
Sbjct: 875  EQLQDILNTVAVYSNPSGFNQGMYSLRWPFWKELDLYHPRWNSKDLQVAEER 926


>ref|XP_002309059.1| predicted protein [Populus trichocarpa] gi|222855035|gb|EEE92582.1|
            predicted protein [Populus trichocarpa]
          Length = 1774

 Score =  186 bits (471), Expect = 2e-45
 Identities = 89/112 (79%), Positives = 100/112 (89%)
 Frame = -3

Query: 337  YEPVLMQEMLSLIIQIVKERRICGITPAECLQRELIYKLSTGDATHSQLVKSLPRDLSKV 158
            YEPVLMQEML L+IQIV+ERR  G+TPAE L+REL++KL+ GDAT SQLVKSLPRDLSK+
Sbjct: 814  YEPVLMQEMLMLLIQIVQERRFSGLTPAENLKRELVHKLAIGDATRSQLVKSLPRDLSKI 873

Query: 157  GEFQEILDTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEQR 2
             + QE+LDTVA YSNPSG NQGMY LR AYWKELDLYHPRWNSRDLQVAE+R
Sbjct: 874  DQLQEVLDTVAVYSNPSGFNQGMYSLRWAYWKELDLYHPRWNSRDLQVAEER 925


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/112 (77%), Positives = 99/112 (88%)
 Frame = -3

Query: 337  YEPVLMQEMLSLIIQIVKERRICGITPAECLQRELIYKLSTGDATHSQLVKSLPRDLSKV 158
            YEPVL+QEML+LIIQ+VKERR CG+T  E L+RELIYKL+ G+ATHSQLVKSLPRDLSK+
Sbjct: 829  YEPVLVQEMLTLIIQLVKERRFCGLTTTESLKRELIYKLAIGNATHSQLVKSLPRDLSKI 888

Query: 157  GEFQEILDTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEQR 2
             + QEILDT+A YS PSG+NQGMY LR AYWKELDLYHPRWN RDLQ AE+R
Sbjct: 889  DQLQEILDTIALYSEPSGVNQGMYSLRQAYWKELDLYHPRWNPRDLQFAEER 940


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