BLASTX nr result

ID: Panax21_contig00005318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005318
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   464   0.0  
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              457   0.0  
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   437   0.0  
ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago tr...   434   e-177
ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|2...   429   e-177

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis vinifera]
          Length = 695

 Score =  464 bits (1193), Expect(2) = 0.0
 Identities = 237/291 (81%), Positives = 261/291 (89%)
 Frame = +1

Query: 481  NGVLLREMMNDPLLSKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIIASATIEA 660
            +GVLLREMM+DPLL+KYSVIMVDEAHERS+STDILLGLLKKIQRRRPELRLII+SATIEA
Sbjct: 147  DGVLLREMMDDPLLTKYSVIMVDEAHERSLSTDILLGLLKKIQRRRPELRLIISSATIEA 206

Query: 661  KSMAAFFRTSKKRRGTEGEEHGLKTEPAILSVEGRGFNVQIFYVEEPVPDYLQAAVSTVM 840
            KSM+ FF+TS+KRRG EGEE G +T+PAILSVEGRGFNVQI ++EEPVPDYLQAAVSTV+
Sbjct: 207  KSMSTFFQTSRKRRGLEGEESGPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVL 266

Query: 841  SIHNHEPMGDILVFLTGQDDIDAAAQLLTEEAQNSGKPSAGLTILPLYSGLSRADQDLVF 1020
            SIH  EPMGDILVFLTG++DIDAA QLL EEAQN+GK S+GL +LPLYSGLSRADQDLVF
Sbjct: 267  SIHEQEPMGDILVFLTGENDIDAAVQLLNEEAQNNGKHSSGLVVLPLYSGLSRADQDLVF 326

Query: 1021 SPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQRFYNPITDIENLVIAPISKASXX 1200
            SPTPRGKRKVVISTNIAETSLTLEG+VYVVDSGFSKQRFYNPI+DIENLV+APISKAS  
Sbjct: 327  SPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASAR 386

Query: 1201 XXXXXXXXXXXXKCYRLYTEEFYVKELSTEGIPEMQRSNLVSSVIQLKALG 1353
                        KCYRLYTEE++V E+S   IPEMQRSNLVS VIQLKALG
Sbjct: 387  QRAGRAGRVRPGKCYRLYTEEYFVNEMSAHAIPEMQRSNLVSCVIQLKALG 437



 Score =  234 bits (596), Expect(2) = 0.0
 Identities = 115/138 (83%), Positives = 126/138 (91%)
 Frame = +2

Query: 68  MSQFWKPGTERPRLLDDEEGGVLFYXXXXXXXXXAYGYASMEKQRQRLPVYKYRASILYL 247
           MSQFWKPG+E+PRLLDDEEGGVLFY          +GY+++EKQRQRLPVYKYR +ILYL
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSS-GFGYSNIEKQRQRLPVYKYRTAILYL 59

Query: 248 VESHSTSIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 427
           VE+H+T+IIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV
Sbjct: 60  VETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 119

Query: 428 KLGEEVGYTIRFEDLTNT 481
           KLGEEVGYTIRFEDL+ T
Sbjct: 120 KLGEEVGYTIRFEDLSKT 137


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  457 bits (1177), Expect(2) = 0.0
 Identities = 236/291 (81%), Positives = 260/291 (89%)
 Frame = +1

Query: 481  NGVLLREMMNDPLLSKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIIASATIEA 660
            +GVLLREMM+DPLL+KYSVIMVDEAHERS+STDILLGLLKKIQRRRPELRLII+SATIEA
Sbjct: 147  DGVLLREMMDDPLLTKYSVIMVDEAHERSLSTDILLGLLKKIQRRRPELRLIISSATIEA 206

Query: 661  KSMAAFFRTSKKRRGTEGEEHGLKTEPAILSVEGRGFNVQIFYVEEPVPDYLQAAVSTVM 840
            KSM+ FF+T +KRRG EGEE G +T+PAILSVEGRGFNVQI ++EEPVPDYLQAAVSTV+
Sbjct: 207  KSMSTFFQT-RKRRGLEGEESGPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVL 265

Query: 841  SIHNHEPMGDILVFLTGQDDIDAAAQLLTEEAQNSGKPSAGLTILPLYSGLSRADQDLVF 1020
            SIH  EPMGDILVFLTG++DIDAA QLL EEAQN+GK S+GL +LPLYSGLSRADQDLVF
Sbjct: 266  SIHEQEPMGDILVFLTGENDIDAAVQLLNEEAQNNGKHSSGLVVLPLYSGLSRADQDLVF 325

Query: 1021 SPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQRFYNPITDIENLVIAPISKASXX 1200
            SPTPRGKRKVVISTNIAETSLTLEG+VYVVDSGFSKQRFYNPI+DIENLV+APISKAS  
Sbjct: 326  SPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASAR 385

Query: 1201 XXXXXXXXXXXXKCYRLYTEEFYVKELSTEGIPEMQRSNLVSSVIQLKALG 1353
                        KCYRLYTEE++V E+S   IPEMQRSNLVS VIQLKALG
Sbjct: 386  QRAGRAGRVRPGKCYRLYTEEYFVNEMSAHAIPEMQRSNLVSCVIQLKALG 436



 Score =  234 bits (596), Expect(2) = 0.0
 Identities = 115/138 (83%), Positives = 126/138 (91%)
 Frame = +2

Query: 68  MSQFWKPGTERPRLLDDEEGGVLFYXXXXXXXXXAYGYASMEKQRQRLPVYKYRASILYL 247
           MSQFWKPG+E+PRLLDDEEGGVLFY          +GY+++EKQRQRLPVYKYR +ILYL
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSS-GFGYSNIEKQRQRLPVYKYRTAILYL 59

Query: 248 VESHSTSIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 427
           VE+H+T+IIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV
Sbjct: 60  VETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 119

Query: 428 KLGEEVGYTIRFEDLTNT 481
           KLGEEVGYTIRFEDL+ T
Sbjct: 120 KLGEEVGYTIRFEDLSKT 137


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
            sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
            probable ATP-dependent RNA helicase DHX35-like [Cucumis
            sativus]
          Length = 696

 Score =  437 bits (1125), Expect(2) = 0.0
 Identities = 226/291 (77%), Positives = 252/291 (86%)
 Frame = +1

Query: 481  NGVLLREMMNDPLLSKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIIASATIEA 660
            +GVLLREMM+DPLL+KYSVIMVDEAHERSISTD+LLGLLKKIQRRRP+LRLII+SATIEA
Sbjct: 148  DGVLLREMMDDPLLTKYSVIMVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEA 207

Query: 661  KSMAAFFRTSKKRRGTEGEEHGLKTEPAILSVEGRGFNVQIFYVEEPVPDYLQAAVSTVM 840
            KSM+ FF+ SK+RRG EGE    K EPAILSVEGRGFNVQIFY+EEPV DY+Q+AVSTV+
Sbjct: 208  KSMSTFFQMSKRRRGLEGETLEPKVEPAILSVEGRGFNVQIFYLEEPVSDYVQSAVSTVL 267

Query: 841  SIHNHEPMGDILVFLTGQDDIDAAAQLLTEEAQNSGKPSAGLTILPLYSGLSRADQDLVF 1020
            SIH  EP GDILVFLTGQDDIDAA QLL EE QN  K S  L +LPLYSGLSRA+QDL+F
Sbjct: 268  SIHEQEPPGDILVFLTGQDDIDAAVQLLIEEGQNDRKKSE-LIVLPLYSGLSRAEQDLIF 326

Query: 1021 SPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQRFYNPITDIENLVIAPISKASXX 1200
            SPTPRGKRKVVISTNIAETSLTLEG+VYV+DSGFSKQRFYNPITDIE+L++APISKAS  
Sbjct: 327  SPTPRGKRKVVISTNIAETSLTLEGIVYVIDSGFSKQRFYNPITDIESLIVAPISKASAR 386

Query: 1201 XXXXXXXXXXXXKCYRLYTEEFYVKELSTEGIPEMQRSNLVSSVIQLKALG 1353
                        KCYRLYTEE+++ E+  EGIPEMQRSNLV+ VIQLKALG
Sbjct: 387  QRTGRAGRIRPGKCYRLYTEEYFINEMPAEGIPEMQRSNLVTCVIQLKALG 437



 Score =  233 bits (595), Expect(2) = 0.0
 Identities = 113/137 (82%), Positives = 124/137 (90%)
 Frame = +2

Query: 68  MSQFWKPGTERPRLLDDEEGGVLFYXXXXXXXXXAYGYASMEKQRQRLPVYKYRASILYL 247
           M+QFWKPGTE+PRLLDD EGGVLF+          +G++S EKQRQRLPVYKYR +ILYL
Sbjct: 1   MAQFWKPGTEKPRLLDDGEGGVLFFSSSYSSSSSGFGFSSTEKQRQRLPVYKYRTAILYL 60

Query: 248 VESHSTSIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 427
           VE+H+T+IIVGETGSGKTTQIPQ+LKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV
Sbjct: 61  VETHATTIIVGETGSGKTTQIPQFLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 120

Query: 428 KLGEEVGYTIRFEDLTN 478
           KLGEEVGYTIRFEDLTN
Sbjct: 121 KLGEEVGYTIRFEDLTN 137


>ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago truncatula]
            gi|355482757|gb|AES63960.1| ATP-dependent RNA helicase
            dhx8 [Medicago truncatula]
          Length = 701

 Score =  434 bits (1117), Expect(2) = e-177
 Identities = 225/291 (77%), Positives = 247/291 (84%)
 Frame = +1

Query: 481  NGVLLREMMNDPLLSKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIIASATIEA 660
            +GVLLREMMNDPLL+KYSV+MVDEAHERSISTDILLGLLKKIQ+RRPELRLIIASATIEA
Sbjct: 153  DGVLLREMMNDPLLTKYSVVMVDEAHERSISTDILLGLLKKIQKRRPELRLIIASATIEA 212

Query: 661  KSMAAFFRTSKKRRGTEGEEHGLKTEPAILSVEGRGFNVQIFYVEEPVPDYLQAAVSTVM 840
            KSMA FFR  KKRR  E + +GLK EPAILSVEGRGFNVQI + EEPV DY+QAAVSTV+
Sbjct: 213  KSMADFFRPRKKRREPENDVNGLKVEPAILSVEGRGFNVQINFAEEPVQDYVQAAVSTVL 272

Query: 841  SIHNHEPMGDILVFLTGQDDIDAAAQLLTEEAQNSGKPSAGLTILPLYSGLSRADQDLVF 1020
             IH  E  GD+LVFLTGQDDIDAA  L  EE QN+ K S+GL +LPLYSGL RADQ+LVF
Sbjct: 273  LIHERESTGDVLVFLTGQDDIDAAVHLFNEEIQNNRKHSSGLVVLPLYSGLPRADQELVF 332

Query: 1021 SPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQRFYNPITDIENLVIAPISKASXX 1200
            SP PRGKRKVVISTNIAETSLTLEG+VYVVDSGFSKQRFYNPI+DIENLV+APIS+AS  
Sbjct: 333  SPAPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISRASAR 392

Query: 1201 XXXXXXXXXXXXKCYRLYTEEFYVKELSTEGIPEMQRSNLVSSVIQLKALG 1353
                        KCYRLYTEEF++  +S EGIPE+QRSNLVS VIQLKALG
Sbjct: 393  QRAGRAGRVRPGKCYRLYTEEFFLNHMSNEGIPEIQRSNLVSCVIQLKALG 443



 Score =  214 bits (546), Expect(2) = e-177
 Identities = 108/145 (74%), Positives = 125/145 (86%), Gaps = 5/145 (3%)
 Frame = +2

Query: 68  MSQFWKPGTERP--RLLDDEEGGVLFYXXXXXXXXXA---YGYASMEKQRQRLPVYKYRA 232
           M+QFWKPGTE+P  +++DDEEGGVLF          +   YGYAS++KQRQRLPVYKYR 
Sbjct: 1   MAQFWKPGTEKPEAQVVDDEEGGVLFIPGASSFSSSSSSGYGYASIDKQRQRLPVYKYRN 60

Query: 233 SILYLVESHSTSIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVA 412
           +ILYLVE+HST+IIVGETGSGKTTQIPQYL EAGWA GGR+IACTQPRRLAVQAV+SRVA
Sbjct: 61  AILYLVETHSTTIIVGETGSGKTTQIPQYLIEAGWASGGRLIACTQPRRLAVQAVSSRVA 120

Query: 413 EEMGVKLGEEVGYTIRFEDLTNTME 487
           +EMGVKLG++VGYTIRFED+TN  E
Sbjct: 121 QEMGVKLGDQVGYTIRFEDVTNQDE 145


>ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|222848726|gb|EEE86273.1|
            predicted protein [Populus trichocarpa]
          Length = 702

 Score =  429 bits (1103), Expect(2) = e-177
 Identities = 227/291 (78%), Positives = 246/291 (84%)
 Frame = +1

Query: 481  NGVLLREMMNDPLLSKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIIASATIEA 660
            +GVLLRE+MNDPLL+KYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLII+SATIEA
Sbjct: 152  DGVLLREIMNDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEA 211

Query: 661  KSMAAFFRTSKKRRGTEGEEHGLKTEPAILSVEGRGFNVQIFYVEEPVPDYLQAAVSTVM 840
            KSM+ FF+TSKK RG E  E   +  PAILSVEGRGFNV I YV EPV DY+QA VSTV+
Sbjct: 212  KSMSDFFQTSKKHRGPEDHEFVPRKVPAILSVEGRGFNVHIHYVVEPVSDYVQATVSTVL 271

Query: 841  SIHNHEPMGDILVFLTGQDDIDAAAQLLTEEAQNSGKPSAGLTILPLYSGLSRADQDLVF 1020
            SIH  EP GDILVFLTGQDDID A +LLTEEA  S K S+GL +LPLYS L RADQDLVF
Sbjct: 272  SIHEQEPAGDILVFLTGQDDIDTAIRLLTEEAHASRKISSGLIVLPLYSSLPRADQDLVF 331

Query: 1021 SPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQRFYNPITDIENLVIAPISKASXX 1200
            SPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQ+FYNPI+DIENLV+APISKAS  
Sbjct: 332  SPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQQFYNPISDIENLVVAPISKASAR 391

Query: 1201 XXXXXXXXXXXXKCYRLYTEEFYVKELSTEGIPEMQRSNLVSSVIQLKALG 1353
                        KCYRLYTEE++V E+S+ GIPEMQRS LVS VIQLKALG
Sbjct: 392  QRAGRAGRVRPGKCYRLYTEEYFVNEMSSVGIPEMQRSKLVSCVIQLKALG 442



 Score =  219 bits (557), Expect(2) = e-177
 Identities = 107/138 (77%), Positives = 121/138 (87%), Gaps = 3/138 (2%)
 Frame = +2

Query: 74  QFWKPGTERPRLLDDEEGGVLFYXXXXXXXXXA---YGYASMEKQRQRLPVYKYRASILY 244
           QFWKPG+E+PR+L+DEEGGV+F+         +   +GYAS+  QRQRLPVYKYR +ILY
Sbjct: 4   QFWKPGSEKPRILEDEEGGVVFFGPPLSSAASSSSRFGYASIGSQRQRLPVYKYRTAILY 63

Query: 245 LVESHSTSIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMG 424
           LVE+H+T+IIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ VASRVAEEM 
Sbjct: 64  LVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQTVASRVAEEMD 123

Query: 425 VKLGEEVGYTIRFEDLTN 478
           VKLGEEVGYTIRFED+TN
Sbjct: 124 VKLGEEVGYTIRFEDVTN 141


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