BLASTX nr result

ID: Panax21_contig00005314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005314
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex...   338   e-124
gb|ADM64536.1| Arp2/3 complex p35 subunit [Nicotiana tabacum]         323   e-123
ref|XP_002297905.1| predicted protein [Populus trichocarpa] gi|2...   342   e-122
ref|XP_002304616.1| predicted protein [Populus trichocarpa] gi|2...   329   e-119
ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex...   328   e-119

>ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex subunit 2 isoform 1
           [Vitis vinifera] gi|297737660|emb|CBI26861.3| unnamed
           protein product [Vitis vinifera]
          Length = 328

 Score =  338 bits (867), Expect(2) = e-124
 Identities = 171/206 (83%), Positives = 184/206 (89%)
 Frame = -3

Query: 896 ENSKTLLVKIASVREVVLGAPLRVVLKHLATRTLAPDVDKLVALVHRPKESFFLVPRAEK 717
           E    LLVKIASVREVVLGAPLRVVLKHLA+RT+APD+++  ALVHRPKESFFLVP+AEK
Sbjct: 113 EYKHALLVKIASVREVVLGAPLRVVLKHLASRTVAPDINRPFALVHRPKESFFLVPQAEK 172

Query: 716 VTVVFPMRFKDSIDTVLATSFLQEFMEARRAAGLNTAPSCLWSLSPPPELNDAPAESLSV 537
           VTVVFPMRFKDSIDTVLATSFLQEF+EARR AGLN AP CLWS SPP EL     E+LS 
Sbjct: 173 VTVVFPMRFKDSIDTVLATSFLQEFVEARRTAGLNNAPPCLWSPSPPLELRGTAGEALSA 232

Query: 536 NAGFVTFVILPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALD 357
           NAGFVTFVI PRHVEGKKLDRTVW+LSTF AYVSYHVKCSEGFMHTRMRRRVESLIQALD
Sbjct: 233 NAGFVTFVIFPRHVEGKKLDRTVWSLSTFRAYVSYHVKCSEGFMHTRMRRRVESLIQALD 292

Query: 356 RAKPDSEKAKKSAQSRSFKRLSLKDS 279
           RAKPD EK+KK+ Q RSFKRLSLK++
Sbjct: 293 RAKPDLEKSKKTVQGRSFKRLSLKEA 318



 Score =  135 bits (339), Expect(2) = e-124
 Identities = 66/101 (65%), Positives = 76/101 (75%)
 Frame = -1

Query: 1222 LQILSNRVQNLEKGVELDCQWVEFDDVRYHIQTSVKXXXXXXXXXXXXXXXPETAFFGGL 1043
            LQ L NRVQNLEKGVELD QWVEFDDVRYH+Q S+K                E  F GGL
Sbjct: 12   LQTLLNRVQNLEKGVELDYQWVEFDDVRYHVQVSMKYPQFLLLSVSLPTPAQEAVFSGGL 71

Query: 1042 PRGAIEAVKAAYGVVVKIIDPPKDGYNLTVKMNLSKLPADE 920
            P GAIEA+KA+YGV+V+I+DPPKDG+NLT+K+NLSKLP DE
Sbjct: 72   PFGAIEAIKASYGVLVQILDPPKDGFNLTLKLNLSKLPPDE 112


>gb|ADM64536.1| Arp2/3 complex p35 subunit [Nicotiana tabacum]
          Length = 328

 Score =  323 bits (828), Expect(2) = e-123
 Identities = 161/211 (76%), Positives = 181/211 (85%)
 Frame = -3

Query: 896 ENSKTLLVKIASVREVVLGAPLRVVLKHLATRTLAPDVDKLVALVHRPKESFFLVPRAEK 717
           E+   LL KIASVREVV+GAPLR VLKHL +RT+  D+ K VALVHRP ESFFLVP+ +K
Sbjct: 113 EHKHALLTKIASVREVVMGAPLRAVLKHLVSRTVPSDLGKPVALVHRPNESFFLVPQVDK 172

Query: 716 VTVVFPMRFKDSIDTVLATSFLQEFMEARRAAGLNTAPSCLWSLSPPPELNDAPAESLSV 537
           VTV+FPMRF DS+DTVLATSFLQEF+EARR AGLN AP CLWS S P EL +A  E+LS 
Sbjct: 173 VTVIFPMRFNDSVDTVLATSFLQEFVEARRTAGLNNAPPCLWSPSAPQELKEAFTEALSA 232

Query: 536 NAGFVTFVILPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALD 357
           NAGFV+FVI PRHVEG+KLDRTVWNLSTFHAYV+YHVKCSE FMHTRMRR+VESLIQALD
Sbjct: 233 NAGFVSFVIFPRHVEGRKLDRTVWNLSTFHAYVNYHVKCSECFMHTRMRRQVESLIQALD 292

Query: 356 RAKPDSEKAKKSAQSRSFKRLSLKDSRG*VG 264
           RAKPDSEKAK+S+ SRSFKR+SLKD    +G
Sbjct: 293 RAKPDSEKAKRSSPSRSFKRMSLKDGNNSLG 323



 Score =  146 bits (369), Expect(2) = e-123
 Identities = 71/101 (70%), Positives = 80/101 (79%)
 Frame = -1

Query: 1222 LQILSNRVQNLEKGVELDCQWVEFDDVRYHIQTSVKXXXXXXXXXXXXXXXPETAFFGGL 1043
            LQILSNRVQNLEKGVELDCQWVEFDD+RYHIQ SVK               PET  FGGL
Sbjct: 12   LQILSNRVQNLEKGVELDCQWVEFDDIRYHIQASVKNPNVLLLSVSLPIPPPETVLFGGL 71

Query: 1042 PRGAIEAVKAAYGVVVKIIDPPKDGYNLTVKMNLSKLPADE 920
            P GA+EA+KAAYGVV +I+DPP+DG+NLT+K+NLSKLP DE
Sbjct: 72   PLGALEAIKAAYGVVAQILDPPRDGFNLTLKLNLSKLPPDE 112


>ref|XP_002297905.1| predicted protein [Populus trichocarpa] gi|222845163|gb|EEE82710.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  342 bits (877), Expect(2) = e-122
 Identities = 171/207 (82%), Positives = 187/207 (90%)
 Frame = -3

Query: 896 ENSKTLLVKIASVREVVLGAPLRVVLKHLATRTLAPDVDKLVALVHRPKESFFLVPRAEK 717
           E+   LLVKIASVREVVLGAPLRVVLKHLA+RT+ PDVD+++ALVHRPKESFFLV + +K
Sbjct: 113 EHRYALLVKIASVREVVLGAPLRVVLKHLASRTVVPDVDRVLALVHRPKESFFLVSQPDK 172

Query: 716 VTVVFPMRFKDSIDTVLATSFLQEFMEARRAAGLNTAPSCLWSLSPPPELNDAPAESLSV 537
           VTVVFPMRFKDSIDT  ATSFLQEF+EARRAAGLN AP CLWS +PP ELN+APAE+LS 
Sbjct: 173 VTVVFPMRFKDSIDTAFATSFLQEFVEARRAAGLNNAPPCLWSPTPPLELNEAPAEALSA 232

Query: 536 NAGFVTFVILPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALD 357
           NAGFV+FVI PRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALD
Sbjct: 233 NAGFVSFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALD 292

Query: 356 RAKPDSEKAKKSAQSRSFKRLSLKDSR 276
           RAKP  E+ KKS  SRSFKRLSL ++R
Sbjct: 293 RAKPGGEEKKKSPNSRSFKRLSLSEAR 319



 Score =  125 bits (314), Expect(2) = e-122
 Identities = 64/101 (63%), Positives = 71/101 (70%)
 Frame = -1

Query: 1222 LQILSNRVQNLEKGVELDCQWVEFDDVRYHIQTSVKXXXXXXXXXXXXXXXPETAFFGGL 1043
            LQ L NRVQNLEK VELD  WVEF DVRYHI  S K               PE  F GGL
Sbjct: 12   LQTLLNRVQNLEKAVELDYLWVEFSDVRYHILVSTKNPNVLLLSVSLPTPPPEAVFIGGL 71

Query: 1042 PRGAIEAVKAAYGVVVKIIDPPKDGYNLTVKMNLSKLPADE 920
            P GAIEA+KAAYGVVV I+DPP+DG+NLT+K+NL+KLP DE
Sbjct: 72   PGGAIEAIKAAYGVVVHILDPPRDGFNLTLKLNLAKLPPDE 112


>ref|XP_002304616.1| predicted protein [Populus trichocarpa] gi|222842048|gb|EEE79595.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  329 bits (844), Expect(2) = e-119
 Identities = 165/207 (79%), Positives = 182/207 (87%)
 Frame = -3

Query: 896 ENSKTLLVKIASVREVVLGAPLRVVLKHLATRTLAPDVDKLVALVHRPKESFFLVPRAEK 717
           E+   LLVKIASVREVVLGAPLRVVLKHL++RT+ P +D L+ALVHR KESFFLVP+ +K
Sbjct: 113 EHRYALLVKIASVREVVLGAPLRVVLKHLSSRTVIPGIDGLLALVHRSKESFFLVPQPDK 172

Query: 716 VTVVFPMRFKDSIDTVLATSFLQEFMEARRAAGLNTAPSCLWSLSPPPELNDAPAESLSV 537
           VTVVFPMRFKDSID   ATSFLQEF+EAR  AGLN AP CLWS +PP EL +APAE+LS 
Sbjct: 173 VTVVFPMRFKDSIDIAFATSFLQEFVEARHTAGLNNAPPCLWSPNPPLELKEAPAEALSA 232

Query: 536 NAGFVTFVILPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALD 357
           NAGFV+FVI PRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVES+IQALD
Sbjct: 233 NAGFVSFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIQALD 292

Query: 356 RAKPDSEKAKKSAQSRSFKRLSLKDSR 276
           RAKP  E+ KKS  SRSFKRLSLK++R
Sbjct: 293 RAKPGVEEKKKSPNSRSFKRLSLKEAR 319



 Score =  128 bits (321), Expect(2) = e-119
 Identities = 65/101 (64%), Positives = 73/101 (72%)
 Frame = -1

Query: 1222 LQILSNRVQNLEKGVELDCQWVEFDDVRYHIQTSVKXXXXXXXXXXXXXXXPETAFFGGL 1043
            LQ L NRVQNLEK VELD  WVEFDDVRYHI  S+K               PE  F GGL
Sbjct: 12   LQTLLNRVQNLEKAVELDYHWVEFDDVRYHILVSMKNPNVLLLSVSLPIPPPEAVFIGGL 71

Query: 1042 PRGAIEAVKAAYGVVVKIIDPPKDGYNLTVKMNLSKLPADE 920
            P GAIEA+KAAYGVVV+I+DPP+DG+NLT+K+NL KLP DE
Sbjct: 72   PFGAIEALKAAYGVVVQILDPPRDGFNLTLKLNLGKLPLDE 112


>ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Glycine max]
          Length = 324

 Score =  328 bits (840), Expect(2) = e-119
 Identities = 160/207 (77%), Positives = 182/207 (87%)
 Frame = -3

Query: 896 ENSKTLLVKIASVREVVLGAPLRVVLKHLATRTLAPDVDKLVALVHRPKESFFLVPRAEK 717
           E     LVK+AS+REVVLGAPLRV+L+HLA RT+A D+D LVALVHRP ESFFL P+A+K
Sbjct: 113 EQKHAFLVKVASIREVVLGAPLRVILEHLAARTVALDMDPLVALVHRPNESFFLFPQADK 172

Query: 716 VTVVFPMRFKDSIDTVLATSFLQEFMEARRAAGLNTAPSCLWSLSPPPELNDAPAESLSV 537
           VTVV+PMRF DSID VLATSFLQEF+EARR AGLN  P C WSL+PP EL + PA++LS 
Sbjct: 173 VTVVYPMRFNDSIDIVLATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKEVPADALSA 232

Query: 536 NAGFVTFVILPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALD 357
           NAGFVTFVI PRHVEG+KLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQAL+
Sbjct: 233 NAGFVTFVIFPRHVEGQKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALN 292

Query: 356 RAKPDSEKAKKSAQSRSFKRLSLKDSR 276
           RAKPD+E +KK++ +RSFKRL LK+SR
Sbjct: 293 RAKPDAENSKKTSYNRSFKRLGLKESR 319



 Score =  127 bits (318), Expect(2) = e-119
 Identities = 64/107 (59%), Positives = 76/107 (71%)
 Frame = -1

Query: 1222 LQILSNRVQNLEKGVELDCQWVEFDDVRYHIQTSVKXXXXXXXXXXXXXXXPETAFFGGL 1043
            LQ L NR QNLEKGVELD  WVEFDDVRYHIQ S+K                ET F  GL
Sbjct: 12   LQTLLNRAQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPTPSSETIFVCGL 71

Query: 1042 PRGAIEAVKAAYGVVVKIIDPPKDGYNLTVKMNLSKLPADEGSTSSF 902
            P GAIEA+KAAYG +V+I+DPP+DG+NLT+K+NLSKLPA++    +F
Sbjct: 72   PFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAF 118


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