BLASTX nr result

ID: Panax21_contig00005278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005278
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532339.1| protein translocase, putative [Ricinus commu...   245   1e-62
ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|2...   243   4e-62
ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,...   238   2e-60
gb|AFK46999.1| unknown [Lotus japonicus]                              235   1e-59
ref|NP_001031527.1| Tim17 domain-containing protein [Arabidopsis...   223   5e-56

>ref|XP_002532339.1| protein translocase, putative [Ricinus communis]
           gi|223527956|gb|EEF30041.1| protein translocase,
           putative [Ricinus communis]
          Length = 159

 Score =  245 bits (626), Expect = 1e-62
 Identities = 121/157 (77%), Positives = 135/157 (85%)
 Frame = -1

Query: 834 MDPSELRYLEDDDTPIMKTIKGATSGLVAGTIWGTIVATWYDVPRVERSVALPGLIRTLK 655
           MDPSELRYLED+DTP MKTIKGAT GL AGT+WGTIVATW+DVPRVE+ VALPGLIRT+K
Sbjct: 1   MDPSELRYLEDNDTPTMKTIKGATMGLAAGTLWGTIVATWHDVPRVEKHVALPGLIRTVK 60

Query: 654 MMGNHGLTFAAIGGVYIGVEQFVQNYRGKRDFINXXXXXXXXXXXXXGYKGKSISTALSA 475
           MMGN+GLTFAAIGGVYIGVEQ +Q++R KRDF+N             G+KG+SISTA+SA
Sbjct: 61  MMGNYGLTFAAIGGVYIGVEQLIQHFRMKRDFVNGTVGGFVAGASVIGFKGRSISTAMSA 120

Query: 474 GAALAVTSSLIDTGGQTTRIDNGKEYYPYTTKKRPNV 364
           GAALAVTS+LID GGQTTRIDNGKEYYPYTTKKR  V
Sbjct: 121 GAALAVTSALIDAGGQTTRIDNGKEYYPYTTKKRSTV 157


>ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|222872974|gb|EEF10105.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  243 bits (621), Expect = 4e-62
 Identities = 119/157 (75%), Positives = 135/157 (85%)
 Frame = -1

Query: 834 MDPSELRYLEDDDTPIMKTIKGATSGLVAGTIWGTIVATWYDVPRVERSVALPGLIRTLK 655
           MDPSE+RYLEDDDTP+MKTIKGAT GLV+GTIWGTIVATW+DVPRVE+SVALPGLIRT+K
Sbjct: 1   MDPSEMRYLEDDDTPMMKTIKGATMGLVSGTIWGTIVATWHDVPRVEKSVALPGLIRTIK 60

Query: 654 MMGNHGLTFAAIGGVYIGVEQFVQNYRGKRDFINXXXXXXXXXXXXXGYKGKSISTALSA 475
           MMGNHG+TFAAIGGVYIGVEQ VQ+YR KRDFIN             G+KG++I  A++A
Sbjct: 61  MMGNHGVTFAAIGGVYIGVEQLVQHYRMKRDFINGAVGGFVAGSTILGFKGRNIKNAIAA 120

Query: 474 GAALAVTSSLIDTGGQTTRIDNGKEYYPYTTKKRPNV 364
           GAALAVTS++ID GGQTTR+D GKEYYPYTTKKR  V
Sbjct: 121 GAALAVTSAIIDAGGQTTRMDTGKEYYPYTTKKRSAV 157


>ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449501899|ref|XP_004161489.1| PREDICTED: outer
           envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 158

 Score =  238 bits (606), Expect = 2e-60
 Identities = 119/157 (75%), Positives = 133/157 (84%)
 Frame = -1

Query: 834 MDPSELRYLEDDDTPIMKTIKGATSGLVAGTIWGTIVATWYDVPRVERSVALPGLIRTLK 655
           MD SE RYLEDDDT +MKTIKGAT G V+GTI+GTIVATW+DVPRVER+VALPGL+RTLK
Sbjct: 1   MDASERRYLEDDDTSLMKTIKGATMGFVSGTIFGTIVATWHDVPRVERNVALPGLVRTLK 60

Query: 654 MMGNHGLTFAAIGGVYIGVEQFVQNYRGKRDFINXXXXXXXXXXXXXGYKGKSISTALSA 475
           +MGN+G+TFAAIGGVYIGVEQ +QNYR KRDF+N             GYKGKSISTALSA
Sbjct: 61  IMGNYGMTFAAIGGVYIGVEQLLQNYRMKRDFVNGAVGGFTAGASVLGYKGKSISTALSA 120

Query: 474 GAALAVTSSLIDTGGQTTRIDNGKEYYPYTTKKRPNV 364
           GAALA TSS+ID GGQTTRID GKEYYPYTTKKR ++
Sbjct: 121 GAALAFTSSVIDIGGQTTRIDTGKEYYPYTTKKRSHI 157


>gb|AFK46999.1| unknown [Lotus japonicus]
          Length = 162

 Score =  235 bits (599), Expect = 1e-59
 Identities = 115/156 (73%), Positives = 133/156 (85%)
 Frame = -1

Query: 834 MDPSELRYLEDDDTPIMKTIKGATSGLVAGTIWGTIVATWYDVPRVERSVALPGLIRTLK 655
           +DP+ELRYLE+DD+ +MKTIKGAT+GLVAGTIWGT+VATWYDVPRVER+VALPGLIRT K
Sbjct: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63

Query: 654 MMGNHGLTFAAIGGVYIGVEQFVQNYRGKRDFINXXXXXXXXXXXXXGYKGKSISTALSA 475
           MMGNHGLTFAAIGGVYIGVEQ VQN+RGKRD +N             GYKG+SISTALSA
Sbjct: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNGAVGGFVAGAAILGYKGRSISTALSA 123

Query: 474 GAALAVTSSLIDTGGQTTRIDNGKEYYPYTTKKRPN 367
           G+ALA TS+++D GGQT + D+GKEY  YTTKKRP+
Sbjct: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYTTKKRPS 159


>ref|NP_001031527.1| Tim17 domain-containing protein [Arabidopsis thaliana]
           gi|330254993|gb|AEC10087.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
          Length = 173

 Score =  223 bits (568), Expect = 5e-56
 Identities = 108/157 (68%), Positives = 130/157 (82%)
 Frame = -1

Query: 843 KKAMDPSELRYLEDDDTPIMKTIKGATSGLVAGTIWGTIVATWYDVPRVERSVALPGLIR 664
           ++ MDP+E+RYLE++D P+MKTIKG+ +G  AGTI+GTI+ATW DVPRVER+VALPGLIR
Sbjct: 12  EEIMDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIR 71

Query: 663 TLKMMGNHGLTFAAIGGVYIGVEQFVQNYRGKRDFINXXXXXXXXXXXXXGYKGKSISTA 484
           TLKMMG HGLTFAAIGGVYIGVEQ VQN+R KRDF N             GY+ +SI TA
Sbjct: 72  TLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYRARSIPTA 131

Query: 483 LSAGAALAVTSSLIDTGGQTTRIDNGKEYYPYTTKKR 373
           ++AGA LAVTS+LID+GGQTTR+DNG+EYYPYT +KR
Sbjct: 132 IAAGATLAVTSALIDSGGQTTRVDNGREYYPYTVEKR 168


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