BLASTX nr result

ID: Panax21_contig00005277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005277
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis...   668   0.0  
emb|CBI35079.3| unnamed protein product [Vitis vinifera]              668   0.0  
emb|CBI35093.3| unnamed protein product [Vitis vinifera]              664   0.0  
ref|XP_002263874.1| PREDICTED: THO complex subunit 1-like [Vitis...   664   0.0  
ref|XP_002299188.1| predicted protein [Populus trichocarpa] gi|2...   633   e-179

>ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis vinifera]
          Length = 601

 Score =  668 bits (1724), Expect = 0.0
 Identities = 330/425 (77%), Positives = 359/425 (84%)
 Frame = -2

Query: 1276 DLFRKAILQPGPPEDFALQIVQEAIKPQKQTKLVQDENQLLENILRMLLQELVSSAVQSG 1097
            ++F++A+L+PGPPE FALQ+VQEAIKPQKQTKL QDENQLLENILR LLQELVS AVQSG
Sbjct: 2    EIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSG 61

Query: 1096 ENIMQYGQSISDEETTQGQIPRILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKDV 917
            E IMQYGQSI DEE  Q QIPR+LDIVLYLCEKEH+EGGMIFQLLEDLTEMSTMRNCKD+
Sbjct: 62   EKIMQYGQSIDDEEAIQSQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDI 121

Query: 916  FGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSER 737
            F YIESKQDILGK ELFARGKLVMLRTCNQLLRRLSKANDVVFCGRI+MFLAHFFPLSER
Sbjct: 122  FAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 181

Query: 736  SAVNIKGVSNTSNETKYEKDAPDGISIDFNFYKTFWSLQEHFSNPTSLTLAPIKWHKFSS 557
            SAVNIKGV NTSNETKYEKDAP+GISIDFNFYKTFWSLQEHF NP S++LAP KW KF+S
Sbjct: 182  SAVNIKGVFNTSNETKYEKDAPEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTS 241

Query: 556  SLMVVLNTFESQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHVLVQCX 377
            +LMVVLNTFE+QPLSDEEGNANNLE+EAATF+IKYLTSSKLMGLELKD SFRRH+LVQC 
Sbjct: 242  NLMVVLNTFEAQPLSDEEGNANNLEEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQC- 300

Query: 376  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVKKLLVMTPPKGN 197
                                                        EERVKKLL MTPPKG 
Sbjct: 301  ---------------LILFDYLKAPGKNDKDLPSDSMKEEIKSCEERVKKLLEMTPPKGK 345

Query: 196  EFLHSIEHILERERNWVWWKRDGCPPFEKQLIEKKSVQDGAKKRKPRWRLGNKQLSQLWK 17
            EFLH+IEHILERE+NWVWWKRDGCPPFE+Q IEKK+VQDGAKKR+PRWR+GNK+LSQLWK
Sbjct: 346  EFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAVQDGAKKRRPRWRMGNKELSQLWK 405

Query: 16   WSEDN 2
            W++ N
Sbjct: 406  WADQN 410


>emb|CBI35079.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  668 bits (1724), Expect = 0.0
 Identities = 330/425 (77%), Positives = 359/425 (84%)
 Frame = -2

Query: 1276 DLFRKAILQPGPPEDFALQIVQEAIKPQKQTKLVQDENQLLENILRMLLQELVSSAVQSG 1097
            ++F++A+L+PGPPE FALQ+VQEAIKPQKQTKL QDENQLLENILR LLQELVS AVQSG
Sbjct: 14   EIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSG 73

Query: 1096 ENIMQYGQSISDEETTQGQIPRILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKDV 917
            E IMQYGQSI DEE  Q QIPR+LDIVLYLCEKEH+EGGMIFQLLEDLTEMSTMRNCKD+
Sbjct: 74   EKIMQYGQSIDDEEAIQSQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDI 133

Query: 916  FGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSER 737
            F YIESKQDILGK ELFARGKLVMLRTCNQLLRRLSKANDVVFCGRI+MFLAHFFPLSER
Sbjct: 134  FAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 193

Query: 736  SAVNIKGVSNTSNETKYEKDAPDGISIDFNFYKTFWSLQEHFSNPTSLTLAPIKWHKFSS 557
            SAVNIKGV NTSNETKYEKDAP+GISIDFNFYKTFWSLQEHF NP S++LAP KW KF+S
Sbjct: 194  SAVNIKGVFNTSNETKYEKDAPEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTS 253

Query: 556  SLMVVLNTFESQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHVLVQCX 377
            +LMVVLNTFE+QPLSDEEGNANNLE+EAATF+IKYLTSSKLMGLELKD SFRRH+LVQC 
Sbjct: 254  NLMVVLNTFEAQPLSDEEGNANNLEEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQC- 312

Query: 376  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVKKLLVMTPPKGN 197
                                                        EERVKKLL MTPPKG 
Sbjct: 313  ---------------LILFDYLKAPGKNDKDLPSDSMKEEIKSCEERVKKLLEMTPPKGK 357

Query: 196  EFLHSIEHILERERNWVWWKRDGCPPFEKQLIEKKSVQDGAKKRKPRWRLGNKQLSQLWK 17
            EFLH+IEHILERE+NWVWWKRDGCPPFE+Q IEKK+VQDGAKKR+PRWR+GNK+LSQLWK
Sbjct: 358  EFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAVQDGAKKRRPRWRMGNKELSQLWK 417

Query: 16   WSEDN 2
            W++ N
Sbjct: 418  WADQN 422


>emb|CBI35093.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  664 bits (1713), Expect = 0.0
 Identities = 328/425 (77%), Positives = 357/425 (84%)
 Frame = -2

Query: 1276 DLFRKAILQPGPPEDFALQIVQEAIKPQKQTKLVQDENQLLENILRMLLQELVSSAVQSG 1097
            ++F++A+L+PGPPE FALQ+VQEAIKPQKQTKL QDENQLLENILR LLQELVS AVQSG
Sbjct: 14   EIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSG 73

Query: 1096 ENIMQYGQSISDEETTQGQIPRILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKDV 917
            E IM YGQSI DEE  Q QIPR+LDIVLYLCEKEH+EGGMIFQLLEDLTEMSTMRNCKD+
Sbjct: 74   EKIMHYGQSIDDEEAIQSQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDI 133

Query: 916  FGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSER 737
            F YIESKQDILGK ELFARGKLVMLRTCNQLLRRLSKANDVVFCGRI+MFLAHFFPLSER
Sbjct: 134  FAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 193

Query: 736  SAVNIKGVSNTSNETKYEKDAPDGISIDFNFYKTFWSLQEHFSNPTSLTLAPIKWHKFSS 557
            SAVNIKGV NTSNETKYEKDAP+GISIDFNFYKTFWSLQEHF NP S++LAP KW KF+S
Sbjct: 194  SAVNIKGVFNTSNETKYEKDAPEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTS 253

Query: 556  SLMVVLNTFESQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHVLVQCX 377
            +LMVVLNTFE+QPLSDEEGNANNLE+EAATF+IKYLTSSKLMGLELKD SFRRH+LVQC 
Sbjct: 254  NLMVVLNTFEAQPLSDEEGNANNLEEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQC- 312

Query: 376  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVKKLLVMTPPKGN 197
                                                        EERVKKLL  TPPKG 
Sbjct: 313  ---------------LILFDYLKAPGKNDKDLPSDSMKEEIKSCEERVKKLLETTPPKGK 357

Query: 196  EFLHSIEHILERERNWVWWKRDGCPPFEKQLIEKKSVQDGAKKRKPRWRLGNKQLSQLWK 17
            EFLH+IEHILERE+NWVWWKRDGCPPFE+Q IEKK+VQDGAKKR+PRWR+GNK+LSQLWK
Sbjct: 358  EFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAVQDGAKKRRPRWRMGNKELSQLWK 417

Query: 16   WSEDN 2
            W++ N
Sbjct: 418  WADQN 422


>ref|XP_002263874.1| PREDICTED: THO complex subunit 1-like [Vitis vinifera]
          Length = 607

 Score =  664 bits (1713), Expect = 0.0
 Identities = 328/425 (77%), Positives = 357/425 (84%)
 Frame = -2

Query: 1276 DLFRKAILQPGPPEDFALQIVQEAIKPQKQTKLVQDENQLLENILRMLLQELVSSAVQSG 1097
            ++F++A+L+PGPPE FALQ+VQEAIKPQKQTKL QDENQLLENILR LLQELVS AVQSG
Sbjct: 8    EIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSG 67

Query: 1096 ENIMQYGQSISDEETTQGQIPRILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKDV 917
            E IM YGQSI DEE  Q QIPR+LDIVLYLCEKEH+EGGMIFQLLEDLTEMSTMRNCKD+
Sbjct: 68   EKIMHYGQSIDDEEAIQSQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDI 127

Query: 916  FGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSER 737
            F YIESKQDILGK ELFARGKLVMLRTCNQLLRRLSKANDVVFCGRI+MFLAHFFPLSER
Sbjct: 128  FAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 187

Query: 736  SAVNIKGVSNTSNETKYEKDAPDGISIDFNFYKTFWSLQEHFSNPTSLTLAPIKWHKFSS 557
            SAVNIKGV NTSNETKYEKDAP+GISIDFNFYKTFWSLQEHF NP S++LAP KW KF+S
Sbjct: 188  SAVNIKGVFNTSNETKYEKDAPEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTS 247

Query: 556  SLMVVLNTFESQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHVLVQCX 377
            +LMVVLNTFE+QPLSDEEGNANNLE+EAATF+IKYLTSSKLMGLELKD SFRRH+LVQC 
Sbjct: 248  NLMVVLNTFEAQPLSDEEGNANNLEEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQC- 306

Query: 376  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVKKLLVMTPPKGN 197
                                                        EERVKKLL  TPPKG 
Sbjct: 307  ---------------LILFDYLKAPGKNDKDLPSDSMKEEIKSCEERVKKLLETTPPKGK 351

Query: 196  EFLHSIEHILERERNWVWWKRDGCPPFEKQLIEKKSVQDGAKKRKPRWRLGNKQLSQLWK 17
            EFLH+IEHILERE+NWVWWKRDGCPPFE+Q IEKK+VQDGAKKR+PRWR+GNK+LSQLWK
Sbjct: 352  EFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAVQDGAKKRRPRWRMGNKELSQLWK 411

Query: 16   WSEDN 2
            W++ N
Sbjct: 412  WADQN 416


>ref|XP_002299188.1| predicted protein [Populus trichocarpa] gi|222846446|gb|EEE83993.1|
            predicted protein [Populus trichocarpa]
          Length = 608

 Score =  633 bits (1633), Expect = e-179
 Identities = 320/423 (75%), Positives = 347/423 (82%)
 Frame = -2

Query: 1270 FRKAILQPGPPEDFALQIVQEAIKPQKQTKLVQDENQLLENILRMLLQELVSSAVQSGEN 1091
            FR+AILQPGP E FAL+ VQE IKPQKQTKLVQDENQLLEN+LR LLQELVSSA QSGE 
Sbjct: 4    FRRAILQPGPVETFALKTVQEFIKPQKQTKLVQDENQLLENMLRTLLQELVSSAAQSGEE 63

Query: 1090 IMQYGQSISDEETTQGQIPRILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKDVFG 911
            IM  G+SI DEE +QGQIPR+LD VLYLCE+EHIEGGMIFQLLEDLTEMSTMRNCKD+FG
Sbjct: 64   IMLSGKSIDDEENSQGQIPRLLDAVLYLCEREHIEGGMIFQLLEDLTEMSTMRNCKDIFG 123

Query: 910  YIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSERSA 731
            YIESKQDILGK ELFARGKLVMLRTCNQLLRRLSKANDVVFCGRI+MFLAHFFPLSERSA
Sbjct: 124  YIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSA 183

Query: 730  VNIKGVSNTSNETKYEKDAPDGISIDFNFYKTFWSLQEHFSNPTSLTLAPIKWHKFSSSL 551
            VNIKGV NTSNETKYEK+ P  IS+DFNFYKT WSLQE+F +P SLTL+PIKW KFSSSL
Sbjct: 184  VNIKGVFNTSNETKYEKEPPAAISLDFNFYKTLWSLQEYFCDP-SLTLSPIKWQKFSSSL 242

Query: 550  MVVLNTFESQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHVLVQCXXX 371
            MVVLNTFE+QPLS+EEG+ANNLE+EAA FNIKYLTSSKLMGLELKD SFRRHVLVQC   
Sbjct: 243  MVVLNTFEAQPLSEEEGDANNLEEEAAAFNIKYLTSSKLMGLELKDPSFRRHVLVQC--- 299

Query: 370  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVKKLLVMTPPKGNEF 191
                                                      EE VKKLL MTPPKG +F
Sbjct: 300  -------------LILFDYLKAPGKNDKDLTSESMKEEIRSREEHVKKLLEMTPPKGKDF 346

Query: 190  LHSIEHILERERNWVWWKRDGCPPFEKQLIEKKSVQDGAKKRKPRWRLGNKQLSQLWKWS 11
            LH +EHILERE+NW+WWKRDGCPPFEKQ IE K+VQDG KKR+PRWRLGNK+LSQLWKW+
Sbjct: 347  LHMVEHILEREKNWLWWKRDGCPPFEKQPIENKTVQDGGKKRRPRWRLGNKELSQLWKWA 406

Query: 10   EDN 2
            + N
Sbjct: 407  DQN 409


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