BLASTX nr result

ID: Panax21_contig00005274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005274
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316089.1| predicted protein [Populus trichocarpa] gi|2...   235   5e-60
ref|XP_002267076.1| PREDICTED: erlin-2-B [Vitis vinifera] gi|297...   233   3e-59
ref|XP_002512086.1| SPFH domain-containing protein 2 precursor, ...   226   3e-57
ref|XP_004171702.1| PREDICTED: LOW QUALITY PROTEIN: erlin-2-B-li...   215   7e-54
ref|XP_004144261.1| PREDICTED: LOW QUALITY PROTEIN: erlin-2-B-li...   215   7e-54

>ref|XP_002316089.1| predicted protein [Populus trichocarpa] gi|222865129|gb|EEF02260.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  235 bits (600), Expect = 5e-60
 Identities = 121/160 (75%), Positives = 129/160 (80%)
 Frame = +2

Query: 197 MEPQQQRTVPAPPLRPPTAQQGGGGDFTPILTVLLSFIAIFAMXXXXXXXXXXXXXAIVH 376
           M+PQQQR   A P R P  Q G   DF+PILTV LSFIAIFA+             +I+H
Sbjct: 1   MDPQQQRA--AIPQRGPPPQTG---DFSPILTVFLSFIAIFALVVALSPVL-----SILH 50

Query: 377 QVPEGHVGVYWRGGALLNTVTDPGFHLKLPLITHFEPIQVTLQTDLVRDIPCGTKGGVMI 556
           QVPEGHVGVYWRGGALL TVTDPGFHLKLPLIT +EP+QVTLQTD VRDIPCGTKGGVMI
Sbjct: 51  QVPEGHVGVYWRGGALLQTVTDPGFHLKLPLITQYEPVQVTLQTDQVRDIPCGTKGGVMI 110

Query: 557 NFEKIEVVNRLHKHYVYETLLNYGVQYDNTWIYDKIHHEI 676
           NFEKIEVVNRL K YVYETLLNYGVQYD+TWIYDKIHHEI
Sbjct: 111 NFEKIEVVNRLGKEYVYETLLNYGVQYDHTWIYDKIHHEI 150


>ref|XP_002267076.1| PREDICTED: erlin-2-B [Vitis vinifera] gi|297738083|emb|CBI27284.3|
           unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  233 bits (594), Expect = 3e-59
 Identities = 112/158 (70%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
 Frame = +2

Query: 206 QQQRTVPAPPLRP-PTAQQGGGGDFTPILTVLLSFIAIFAMXXXXXXXXXXXXXAIVHQV 382
           QQ R    PP RP P      GGDF+ I+TVL  FI IF+               ++HQV
Sbjct: 18  QQGRRSETPPPRPRPAPAAAAGGDFSAIITVLFFFILIFSFVAFQSSSTLTNNLTLLHQV 77

Query: 383 PEGHVGVYWRGGALLNTVTDPGFHLKLPLITHFEPIQVTLQTDLVRDIPCGTKGGVMINF 562
           PEGHVG+YWRGGALL T+T+PGFHLK+PL+T FEPIQVTLQTD VRDIPCGTKGGVMINF
Sbjct: 78  PEGHVGMYWRGGALLKTITEPGFHLKMPLVTQFEPIQVTLQTDQVRDIPCGTKGGVMINF 137

Query: 563 EKIEVVNRLHKHYVYETLLNYGVQYDNTWIYDKIHHEI 676
           EKIEVVNRLHK YVYETLLNYGVQYDNTWIYDKIHHEI
Sbjct: 138 EKIEVVNRLHKDYVYETLLNYGVQYDNTWIYDKIHHEI 175


>ref|XP_002512086.1| SPFH domain-containing protein 2 precursor, putative [Ricinus
           communis] gi|223549266|gb|EEF50755.1| SPFH
           domain-containing protein 2 precursor, putative [Ricinus
           communis]
          Length = 365

 Score =  226 bits (576), Expect = 3e-57
 Identities = 111/165 (67%), Positives = 126/165 (76%), Gaps = 5/165 (3%)
 Frame = +2

Query: 197 MEPQQQR-----TVPAPPLRPPTAQQGGGGDFTPILTVLLSFIAIFAMXXXXXXXXXXXX 361
           M+ QQ+R        A   RPP+      GDF+PILTV L+FI I ++            
Sbjct: 1   MDQQQERHRAAAAAAAGAPRPPS------GDFSPILTVFLAFIGIISIIVIPSSANIKNS 54

Query: 362 XAIVHQVPEGHVGVYWRGGALLNTVTDPGFHLKLPLITHFEPIQVTLQTDLVRDIPCGTK 541
            +I+HQVPEGHVGVYWRGGALL+T+T PGFHLK+PL+TH+EP+QVTLQTD VRDIPCGTK
Sbjct: 55  LSILHQVPEGHVGVYWRGGALLDTITSPGFHLKMPLLTHYEPVQVTLQTDQVRDIPCGTK 114

Query: 542 GGVMINFEKIEVVNRLHKHYVYETLLNYGVQYDNTWIYDKIHHEI 676
           GGVMINFEKIEVVNRL K YVYETLLNYGV YDNTWIYDKIHHEI
Sbjct: 115 GGVMINFEKIEVVNRLRKEYVYETLLNYGVDYDNTWIYDKIHHEI 159


>ref|XP_004171702.1| PREDICTED: LOW QUALITY PROTEIN: erlin-2-B-like, partial [Cucumis
           sativus]
          Length = 398

 Score =  215 bits (547), Expect = 7e-54
 Identities = 106/160 (66%), Positives = 118/160 (73%)
 Frame = +2

Query: 197 MEPQQQRTVPAPPLRPPTAQQGGGGDFTPILTVLLSFIAIFAMXXXXXXXXXXXXXAIVH 376
           M+  Q    P+P  RPP +     G  + IL V  SF+AIF+M             +I+H
Sbjct: 1   MDRNQPLQPPSPQPRPPES----AGSSSSILLVFASFLAIFSMVLFPSQSNLSNNLSILH 56

Query: 377 QVPEGHVGVYWRGGALLNTVTDPGFHLKLPLITHFEPIQVTLQTDLVRDIPCGTKGGVMI 556
           QVPEGHVGVYWRGGALL T+TDPGFHLKLPLIT F  +QVTLQTD VRDIPCGTKGGVMI
Sbjct: 57  QVPEGHVGVYWRGGALLKTITDPGFHLKLPLITQFVAVQVTLQTDQVRDIPCGTKGGVMI 116

Query: 557 NFEKIEVVNRLHKHYVYETLLNYGVQYDNTWIYDKIHHEI 676
           NFEKIEVVNRL K YVY+TL+NYGV YDN WIYDKIHHEI
Sbjct: 117 NFEKIEVVNRLRKEYVYDTLVNYGVNYDNIWIYDKIHHEI 156


>ref|XP_004144261.1| PREDICTED: LOW QUALITY PROTEIN: erlin-2-B-like [Cucumis sativus]
          Length = 399

 Score =  215 bits (547), Expect = 7e-54
 Identities = 106/160 (66%), Positives = 118/160 (73%)
 Frame = +2

Query: 197 MEPQQQRTVPAPPLRPPTAQQGGGGDFTPILTVLLSFIAIFAMXXXXXXXXXXXXXAIVH 376
           M+  Q    P+P  RPP +     G  + IL V  SF+AIF+M             +I+H
Sbjct: 1   MDRNQPLQPPSPQPRPPES----AGSSSSILLVFASFLAIFSMVLFPSQSNLSNNLSILH 56

Query: 377 QVPEGHVGVYWRGGALLNTVTDPGFHLKLPLITHFEPIQVTLQTDLVRDIPCGTKGGVMI 556
           QVPEGHVGVYWRGGALL T+TDPGFHLKLPLIT F  +QVTLQTD VRDIPCGTKGGVMI
Sbjct: 57  QVPEGHVGVYWRGGALLKTITDPGFHLKLPLITQFVAVQVTLQTDQVRDIPCGTKGGVMI 116

Query: 557 NFEKIEVVNRLHKHYVYETLLNYGVQYDNTWIYDKIHHEI 676
           NFEKIEVVNRL K YVY+TL+NYGV YDN WIYDKIHHEI
Sbjct: 117 NFEKIEVVNRLRKEYVYDTLVNYGVNYDNIWIYDKIHHEI 156


Top