BLASTX nr result

ID: Panax21_contig00005242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005242
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314172.1| GRAS family transcription factor [Populus tr...   160   8e-38
ref|XP_002533753.1| transcription factor, putative [Ricinus comm...   159   3e-37
ref|XP_002533752.1| transcription factor, putative [Ricinus comm...   157   1e-36
ref|XP_003539667.1| PREDICTED: scarecrow-like protein 14-like [G...   156   1e-36
ref|XP_002314171.1| GRAS family transcription factor [Populus tr...   156   1e-36

>ref|XP_002314172.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850580|gb|EEE88127.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 762

 Score =  160 bits (406), Expect = 8e-38
 Identities = 72/102 (70%), Positives = 85/102 (83%)
 Frame = +1

Query: 1   LPHEDQHILTLEREFYGREAINVIACEGLERVERPETCKQWQVRNMRAGFRHLPLDQELL 180
           +P ED+  L  E+EFYGRE +NVIACEG ERVERPET KQWQVRNMRAG + LP+D  L+
Sbjct: 661 MPREDKMRLKFEKEFYGREVMNVIACEGSERVERPETYKQWQVRNMRAGLKQLPMDPLLI 720

Query: 181 KKLRSQVKSGYHTDFVFDQDSNWMLQGWKGRILYAASCWIPA 306
           KKL+ +VK+GYH DFV D+D NWMLQGWKGRI+YA+S WIPA
Sbjct: 721 KKLKCKVKAGYHEDFVVDEDGNWMLQGWKGRIVYASSAWIPA 762


>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
           gi|223526341|gb|EEF28640.1| transcription factor,
           putative [Ricinus communis]
          Length = 764

 Score =  159 bits (401), Expect = 3e-37
 Identities = 71/102 (69%), Positives = 84/102 (82%)
 Frame = +1

Query: 1   LPHEDQHILTLEREFYGREAINVIACEGLERVERPETCKQWQVRNMRAGFRHLPLDQELL 180
           +  EDQ  L  E+EFYGREA+NVIACEG ERVERPET KQWQVR++RAG + LPL+ +LL
Sbjct: 663 MSREDQMRLKFEKEFYGREALNVIACEGSERVERPETYKQWQVRSLRAGLKQLPLEPQLL 722

Query: 181 KKLRSQVKSGYHTDFVFDQDSNWMLQGWKGRILYAASCWIPA 306
           KKL+ +VK GYH DFV DQD  WMLQGWKGRI+YA+S W+PA
Sbjct: 723 KKLKCRVKEGYHNDFVVDQDGQWMLQGWKGRIIYASSAWVPA 764


>ref|XP_002533752.1| transcription factor, putative [Ricinus communis]
            gi|223526340|gb|EEF28639.1| transcription factor,
            putative [Ricinus communis]
          Length = 815

 Score =  157 bits (396), Expect = 1e-36
 Identities = 69/102 (67%), Positives = 85/102 (83%)
 Frame = +1

Query: 1    LPHEDQHILTLEREFYGREAINVIACEGLERVERPETCKQWQVRNMRAGFRHLPLDQELL 180
            L  EDQ  + LE E YGREA+NV+ACEG ERVERPET KQWQVR  RAGF+ LPL+QE++
Sbjct: 714  LSREDQGRMMLENEIYGREAMNVVACEGTERVERPETYKQWQVRITRAGFKQLPLEQEVM 773

Query: 181  KKLRSQVKSGYHTDFVFDQDSNWMLQGWKGRILYAASCWIPA 306
            +K R ++K+ YH DFV D+D+NWMLQGWKGRI+YA+SCW+PA
Sbjct: 774  EKCRHKLKTWYHKDFVIDEDNNWMLQGWKGRIIYASSCWVPA 815


>ref|XP_003539667.1| PREDICTED: scarecrow-like protein 14-like [Glycine max]
          Length = 680

 Score =  156 bits (395), Expect = 1e-36
 Identities = 67/102 (65%), Positives = 85/102 (83%)
 Frame = +1

Query: 1   LPHEDQHILTLEREFYGREAINVIACEGLERVERPETCKQWQVRNMRAGFRHLPLDQELL 180
           +P E++  + +ERE  GREA+NVIACEG ERVERPET KQWQ RNM+AGF+ LPL++ELL
Sbjct: 579 IPRENEWRMLIEREVLGREAMNVIACEGSERVERPETYKQWQARNMKAGFKQLPLNEELL 638

Query: 181 KKLRSQVKSGYHTDFVFDQDSNWMLQGWKGRILYAASCWIPA 306
            K R++++  YH DFV D+D NWMLQGWKGRILYA++CW+PA
Sbjct: 639 AKFRNELRKSYHRDFVLDEDKNWMLQGWKGRILYASTCWVPA 680


>ref|XP_002314171.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850579|gb|EEE88126.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 794

 Score =  156 bits (395), Expect = 1e-36
 Identities = 67/102 (65%), Positives = 87/102 (85%)
 Frame = +1

Query: 1   LPHEDQHILTLEREFYGREAINVIACEGLERVERPETCKQWQVRNMRAGFRHLPLDQELL 180
           LP EDQ  +  EREF+G++A+NVIACEG +RVERPET KQWQVR +RAGF+ LP DQEL+
Sbjct: 693 LPREDQERMMFEREFFGQDAMNVIACEGQDRVERPETYKQWQVRTVRAGFKPLPFDQELM 752

Query: 181 KKLRSQVKSGYHTDFVFDQDSNWMLQGWKGRILYAASCWIPA 306
            K+R ++K+ YH DFV D+D++WMLQGWKGRI++A+SCW+PA
Sbjct: 753 TKVRGKLKNCYHKDFVVDEDNHWMLQGWKGRIIFASSCWVPA 794


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