BLASTX nr result

ID: Panax21_contig00005237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005237
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268970.2| PREDICTED: transcriptional adapter ADA2-like...   134   8e-30
emb|CAN61657.1| hypothetical protein VITISV_017127 [Vitis vinifera]   128   5e-28
emb|CBI25741.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002510307.1| transcriptional adaptor, putative [Ricinus c...   119   3e-25
ref|XP_002463870.1| hypothetical protein SORBIDRAFT_01g007950 [S...   116   2e-24

>ref|XP_002268970.2| PREDICTED: transcriptional adapter ADA2-like [Vitis vinifera]
          Length = 563

 Score =  134 bits (337), Expect = 8e-30
 Identities = 76/138 (55%), Positives = 89/138 (64%)
 Frame = +1

Query: 4   PMLGEHTVKEESPFSAKIKVEDQSRDGPGRSLAGLISEVXXXXXXXXXXXXXXXVKRASS 183
           P  GE T+K ESP SA++K E + ++GP                          VKRAS+
Sbjct: 189 PTHGELTLKVESPLSARVKYESR-KEGP-------------VVLSSSSKTSAGAVKRASN 234

Query: 184 IVQSKDVHDGTKVEDSQADRSVEEKKLRIPGDEGLSLTEFSGYNTKRQEFDIEYDNDAEQ 363
           + Q KD  D  KVE++Q DRSV EKK R  GDEG S+TE SGYN KRQEFD+EYDNDAEQ
Sbjct: 235 MAQVKDGRDNIKVEETQTDRSVGEKKPRTSGDEGPSVTELSGYNFKRQEFDVEYDNDAEQ 294

Query: 364 LLADMEFKDTDSDAEREL 417
           LLADMEFKDTD+DAE EL
Sbjct: 295 LLADMEFKDTDTDAEHEL 312


>emb|CAN61657.1| hypothetical protein VITISV_017127 [Vitis vinifera]
          Length = 573

 Score =  128 bits (321), Expect = 5e-28
 Identities = 74/142 (52%), Positives = 88/142 (61%), Gaps = 4/142 (2%)
 Frame = +1

Query: 4   PMLGEHTVKEESPFSAKIKVEDQSRDGPGRSLAGLISEVXXXXXXXXXXXXXXX----VK 171
           P  GE T+K ESP SA++K         G+ +   +S +                   VK
Sbjct: 189 PTHGELTLKVESPLSARVKY--------GKCMLKCVSLICQRSNPTWISSSTKTSAGAVK 240

Query: 172 RASSIVQSKDVHDGTKVEDSQADRSVEEKKLRIPGDEGLSLTEFSGYNTKRQEFDIEYDN 351
           RAS++ Q KD  D  KVE++Q DRSV EKK R  GDEG S+TE SGYN KRQEFD+EYDN
Sbjct: 241 RASNMAQVKDGRDNIKVEETQTDRSVGEKKPRTSGDEGPSVTELSGYNFKRQEFDVEYDN 300

Query: 352 DAEQLLADMEFKDTDSDAEREL 417
           DAEQLLADMEFKD D+DAE EL
Sbjct: 301 DAEQLLADMEFKDADTDAEHEL 322


>emb|CBI25741.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  119 bits (299), Expect = 2e-25
 Identities = 74/142 (52%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   FPMLGEHTVKEESPFS-AKIKVEDQSRDGP-GRSLAGLISEVXXXXXXXXXXXXXXX-VK 171
           F +LGE T+KEESPFS +++KVED  + GP GR L+ L ++V                VK
Sbjct: 187 FSLLGELTLKEESPFSPSRVKVEDTHKGGPSGRLLSVLNADVDSTVRSSGTNVAATATVK 246

Query: 172 RASSIVQSKDVHDGTKVEDSQADRSVEEKKLRIPGDEGLSLTEFSGYNTKRQEFDIEYDN 351
           +AS++ Q KD  +  KVED Q DR+   KK    G EG SL E SGYN+KR EFD EYDN
Sbjct: 247 KASNMAQVKDGPNVVKVEDPQIDRNFGGKKPN-SGAEGSSLVELSGYNSKRHEFDPEYDN 305

Query: 352 DAEQLLADMEFKDTDSDAEREL 417
           DAEQLLA+MEFK+ D++ EREL
Sbjct: 306 DAEQLLAEMEFKEPDTEDEREL 327


>ref|XP_002510307.1| transcriptional adaptor, putative [Ricinus communis]
           gi|223551008|gb|EEF52494.1| transcriptional adaptor,
           putative [Ricinus communis]
          Length = 552

 Score =  119 bits (297), Expect = 3e-25
 Identities = 69/139 (49%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   FPMLGEHTVKEESPFSAKIKVEDQSRDGPGRSLAGLISEVXXXXXXXXXXXXXXXVKRAS 180
           FP +G+  + EESP S++IK E   ++      +  I                  VK+AS
Sbjct: 186 FPAVGDLVLNEESPLSSRIKSESWKKEDVACKSSSSIKA--------------DAVKKAS 231

Query: 181 SIVQSKDVHDGTKVEDSQADRSVEEKKLRIPGDEGLSLTEFSGYNTKRQEFDIEYDNDAE 360
           +  Q KD   G KVE+S AD S+ EKKLRI G+E  S+TE SGYN+KR EF+IEYDNDAE
Sbjct: 232 NTNQIKD---GIKVEESLADWSIGEKKLRISGEEQPSMTELSGYNSKRHEFEIEYDNDAE 288

Query: 361 QLLADMEFKDTDSDAEREL 417
           Q+LADMEFK +D+DAEREL
Sbjct: 289 QILADMEFKASDTDAEREL 307


>ref|XP_002463870.1| hypothetical protein SORBIDRAFT_01g007950 [Sorghum bicolor]
           gi|241917724|gb|EER90868.1| hypothetical protein
           SORBIDRAFT_01g007950 [Sorghum bicolor]
          Length = 565

 Score =  116 bits (290), Expect = 2e-24
 Identities = 70/137 (51%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
 Frame = +1

Query: 13  GEHTVKEESPFS-AKIKVEDQSRDGP-GRSLAGLISEVXXXXXXXXXXXXXXXVKRASSI 186
           GE T K ESPFS +++KVED   +GP GRS + +                    K+AS++
Sbjct: 196 GELTPKAESPFSPSRVKVEDALGEGPAGRSPSHIAVGAN---------------KKASNV 240

Query: 187 VQSKDVHDGTKVEDSQADRSVEEKKLRIPGDEGLSLTEFSGYNTKRQEFDIEYDNDAEQL 366
            Q KD  + +K+ED   DRSV  KK R   DEG SLTE SGYN KR EFD EYDNDAEQ 
Sbjct: 241 GQIKDGANVSKIEDGHVDRSVGVKKPRYSADEGPSLTELSGYNAKRHEFDPEYDNDAEQA 300

Query: 367 LADMEFKDTDSDAEREL 417
           LA+MEFK+TDS+ +REL
Sbjct: 301 LAEMEFKETDSETDREL 317


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