BLASTX nr result

ID: Panax21_contig00005236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005236
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268970.2| PREDICTED: transcriptional adapter ADA2-like...   140   8e-32
emb|CAN61657.1| hypothetical protein VITISV_017127 [Vitis vinifera]   135   5e-30
ref|XP_002510307.1| transcriptional adaptor, putative [Ricinus c...   128   4e-28
emb|CBI25741.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002463870.1| hypothetical protein SORBIDRAFT_01g007950 [S...   122   4e-26

>ref|XP_002268970.2| PREDICTED: transcriptional adapter ADA2-like [Vitis vinifera]
          Length = 563

 Score =  140 bits (354), Expect = 8e-32
 Identities = 81/163 (49%), Positives = 98/163 (60%)
 Frame = +1

Query: 1   GLGEVKKGFPMLGEHIVKEESPFSAKIKVEDQNRDGPGRSLSGLISEVXXXXXXXXXXXX 180
           G  EVKKG P  GE  +K ESP SA++K E + ++GP    S   +              
Sbjct: 180 GEDEVKKGSPTHGELTLKVESPLSARVKYESR-KEGPVVLSSSSKTSAG----------- 227

Query: 181 XRGVKRASSIVQSKDGHDGTKVEDSQADRSVGEKQLRIPGDDGPYLTEFSGYNTKRHEFE 360
              VKRAS++ Q KDG D  KVE++Q DRSVGEK+ R  GD+GP +TE SGYN KR EF+
Sbjct: 228 --AVKRASNMAQVKDGRDNIKVEETQTDRSVGEKKPRTSGDEGPSVTELSGYNFKRQEFD 285

Query: 361 IEYDNDAEQLLADMEFKDTDSDAXXXXXXXXXXXXXXXXDERK 489
           +EYDNDAEQLLADMEFKDTD+DA                DERK
Sbjct: 286 VEYDNDAEQLLADMEFKDTDTDAEHELKLQVLHIYSKRLDERK 328


>emb|CAN61657.1| hypothetical protein VITISV_017127 [Vitis vinifera]
          Length = 573

 Score =  135 bits (339), Expect = 5e-30
 Identities = 78/167 (46%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
 Frame = +1

Query: 1   GLGEVKKGFPMLGEHIVKEESPFSAKIKVEDQNRDGPGRSLSGLISEVXXXXXXXXXXXX 180
           G  EVKKG P  GE  +K ESP SA++K         G+ +   +S +            
Sbjct: 180 GEDEVKKGSPTHGELTLKVESPLSARVKY--------GKCMLKCVSLICQRSNPTWISSS 231

Query: 181 XR----GVKRASSIVQSKDGHDGTKVEDSQADRSVGEKQLRIPGDDGPYLTEFSGYNTKR 348
            +     VKRAS++ Q KDG D  KVE++Q DRSVGEK+ R  GD+GP +TE SGYN KR
Sbjct: 232 TKTSAGAVKRASNMAQVKDGRDNIKVEETQTDRSVGEKKPRTSGDEGPSVTELSGYNFKR 291

Query: 349 HEFEIEYDNDAEQLLADMEFKDTDSDAXXXXXXXXXXXXXXXXDERK 489
            EF++EYDNDAEQLLADMEFKD D+DA                DERK
Sbjct: 292 QEFDVEYDNDAEQLLADMEFKDADTDAEHELKLQVLHIYSKRLDERK 338


>ref|XP_002510307.1| transcriptional adaptor, putative [Ricinus communis]
           gi|223551008|gb|EEF52494.1| transcriptional adaptor,
           putative [Ricinus communis]
          Length = 552

 Score =  128 bits (322), Expect = 4e-28
 Identities = 75/163 (46%), Positives = 96/163 (58%)
 Frame = +1

Query: 1   GLGEVKKGFPMLGEHIVKEESPFSAKIKVEDQNRDGPGRSLSGLISEVXXXXXXXXXXXX 180
           G  E+KK FP +G+ ++ EESP S++IK E   ++      S  I               
Sbjct: 178 GQCEIKKEFPAVGDLVLNEESPLSSRIKSESWKKEDVACKSSSSIKA------------- 224

Query: 181 XRGVKRASSIVQSKDGHDGTKVEDSQADRSVGEKQLRIPGDDGPYLTEFSGYNTKRHEFE 360
              VK+AS+  Q KDG    KVE+S AD S+GEK+LRI G++ P +TE SGYN+KRHEFE
Sbjct: 225 -DAVKKASNTNQIKDG---IKVEESLADWSIGEKKLRISGEEQPSMTELSGYNSKRHEFE 280

Query: 361 IEYDNDAEQLLADMEFKDTDSDAXXXXXXXXXXXXXXXXDERK 489
           IEYDNDAEQ+LADMEFK +D+DA                DERK
Sbjct: 281 IEYDNDAEQILADMEFKASDTDAERELKLRVLRIYSKRLDERK 323


>emb|CBI25741.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  124 bits (312), Expect = 6e-27
 Identities = 77/166 (46%), Positives = 100/166 (60%), Gaps = 3/166 (1%)
 Frame = +1

Query: 1   GLGEVKKGFPMLGEHIVKEESPFS-AKIKVEDQNRDGP-GRSLSGLISEVXXXXXXXXXX 174
           G  + KKGF +LGE  +KEESPFS +++KVED ++ GP GR LS L ++V          
Sbjct: 179 GHSDDKKGFSLLGELTLKEESPFSPSRVKVEDTHKGGPSGRLLSVLNADVDSTVRSSGTN 238

Query: 175 XXXRG-VKRASSIVQSKDGHDGTKVEDSQADRSVGEKQLRIPGDDGPYLTEFSGYNTKRH 351
                 VK+AS++ Q KDG +  KVED Q DR+ G K+    G +G  L E SGYN+KRH
Sbjct: 239 VAATATVKKASNMAQVKDGPNVVKVEDPQIDRNFGGKKPN-SGAEGSSLVELSGYNSKRH 297

Query: 352 EFEIEYDNDAEQLLADMEFKDTDSDAXXXXXXXXXXXXXXXXDERK 489
           EF+ EYDNDAEQLLA+MEFK+ D++                 DERK
Sbjct: 298 EFDPEYDNDAEQLLAEMEFKEPDTEDERELKLRVLRIYAKRLDERK 343


>ref|XP_002463870.1| hypothetical protein SORBIDRAFT_01g007950 [Sorghum bicolor]
           gi|241917724|gb|EER90868.1| hypothetical protein
           SORBIDRAFT_01g007950 [Sorghum bicolor]
          Length = 565

 Score =  122 bits (305), Expect = 4e-26
 Identities = 76/164 (46%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
 Frame = +1

Query: 7   GEVKKGFPML-GEHIVKEESPFS-AKIKVEDQNRDGP-GRSLSGLISEVXXXXXXXXXXX 177
           GE KKG  +L GE   K ESPFS +++KVED   +GP GRS S +               
Sbjct: 185 GESKKGTSLLSGELTPKAESPFSPSRVKVEDALGEGPAGRSPSHIAVGAN---------- 234

Query: 178 XXRGVKRASSIVQSKDGHDGTKVEDSQADRSVGEKQLRIPGDDGPYLTEFSGYNTKRHEF 357
                K+AS++ Q KDG + +K+ED   DRSVG K+ R   D+GP LTE SGYN KRHEF
Sbjct: 235 -----KKASNVGQIKDGANVSKIEDGHVDRSVGVKKPRYSADEGPSLTELSGYNAKRHEF 289

Query: 358 EIEYDNDAEQLLADMEFKDTDSDAXXXXXXXXXXXXXXXXDERK 489
           + EYDNDAEQ LA+MEFK+TDS+                 +ERK
Sbjct: 290 DPEYDNDAEQALAEMEFKETDSETDRELKLRVLRIYLSRLEERK 333


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